Ccol005371.1
Basic Information
- Insect
- Colletes collaris
- Gene Symbol
- Myb
- Assembly
- GCA_030068185.1
- Location
- JASGYR010000078.1:20468182-20485709[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-14 1.9e-11 44.7 0.2 1 45 87 136 87 137 0.92 2 3 2.5e-21 3.5e-18 66.2 1.8 1 46 143 189 143 189 0.98 3 3 3.1e-20 4.2e-17 62.8 0.3 1 44 195 238 195 240 0.96
Sequence Information
- Coding Sequence
- ATGTTAGGTTATCTGCGTAGGAAATGTTGCTGTCTGACCTCGTTACATTCTAAGGCGTCTCCTCCGTGGGTCGTGCCCTCTGCTTTGATAAACACTGCAGCGGAGCAAGCTACAAAATCGCGGTCTGGGTACGATTCTAGTAGCGGCGGTGACTCTGACAACGAGTACAGTGGCAGCGTCTGTCGTGGGGTCGCTAATCAGTCACAGAATCCGGCCTCGACGAATGCGAGCACGCACGGGCAGGGGAAGCACATAAACAAAGGAAGGTGGACCAAAGAGGAGGATGCTTTATTGAAGCAGTTAGTGAGCAATGCGGAGCAACGGGGCACAGGACTCCGATGGGACGCCGTGGCTGGTCACTTCCCAGACCGGAGCGACGTCCAATGCCAGCAGAGATGGGCAAAGGTCGTGAATCCGGAGTTGGTCAAGGGACCTTGGACGAAAGAGGAGGATGAGGCAGTGGTGGAATTAGTGGAACGATACGGCCCAAAGAAGTGGACGTTAATTGCACGGCATCTGAAGGGTCGTATCGGTAAGCAGTGTCGGGAACGATGGCACAATCACTTGAATCCGGGAATCAAGAAGACCGCGTGGACGGAGGTGGAGGACAGGATCATCGTCGAGGCTCATCGCAGGGTGGGCAATCAGTGGGCAAAAATCGCCAAATTGCTGCCGGGGAGGACCGACAATGCGATTAAGAATCATTGGAACAGCACCATGAGGAGGAAGTACGAGTCGGAGGAGGGGAGGTCCATCACCGGATCCAGAGGGAGGGGTAGGAGAAAAGCCACAGAATCGTCGTCTGTGTCGAAGGATGTTGGTTGCGCGGATGAGGACGCCTCTAGTCACGGTCGCTTGAAACCACCATCGACTAGCAATGAAAACGCAACGTCTTTGACGAACGTGCAGGCCCATACACTGAACATCGACCAGCTGGACTGGACCAGGGCCTGGGACAATCATCAACAGAGCAGTCAAACCTACCAAGGTCTCCTCAGTCTCAACCAACGTACGCACAACACCGATTCTCGGCTGCAATCCCCCTCGAAACAAGGGACCTCGTCCACCAGAGTCAAGACTGAATCGATCTCGCCGTTTACCAAGTATTTTGATCTGCAAATACAAGGTGAACCGACCAGCTCAAGAAGTTCGGAGATAAGACTAATGCCTATGCCAGACTTGGACGAGATATCAAACATGGCGGAGAAGGAGAGAAGCAGTCCACCTCCGATTCTCCGTCGGCGCAAGAATACTCACCAGCAGAGAACGGGCTCTCCCGACAGTGGAAACCAGTCGGATTATATTATCATAACCCAACATCAGCCAGAGCAGCAGCACcatcagcagcagcagcagcaagaggagcagcagcagcaacaacagcagcagcaacagcaaacTGGCGACAATACCCCATCCACTCCTATCAAGCAACTGCCATTTAGTCCGTCGCAGTTCTTGAACAGTCTGAGTCCTGAAACATCCTCCTGGCCCAGGGCGAGTACCCCCAAGGGAAGCAGTCCTGGTCCTCTTACCACACCACAACCCACTGGTTTTCGACGAAGTCAGAATGACGGCAACACGCCGAGGACGCCAACGCCGTTCAAGAACGCTCTGGCCGAGCTGGAGCGGCGTAGCGGCGCGACTACTCAGTTACCTGCCACCCCCAGTCGTCTCGATGCTCTAACCGAGATCATCAAACAGGAAACCGACCGTGAGAGTTTGGCTGGGACCAGTGCCATCCTCCAGGACTCCGGTTACAGCACGATACGACGACGGGGCAAGGAGAACAGCGCCCCCGGCGGAAAGAGGGCCCGCAAAGCACTCTGTCAAGCCTGGGCGAACGCTTCTCAGGATAATTCAGAAATGAGTTTCGTTGTAGAAACACCAAGTAAAAGTTTGGACACGTCGGTATTGTTTTCACCAGCATCCATGGCGTTGGAGGATAGTTTCTTAACAGCAGGGACTAGTCCCGTGAAGACTTCCCACGACTTCGCGTCCGTTCAACGGAAGCCTAACGCCAAGAGGGCGATCACGTTCGACGCGTTCGACAGTCCCTGCTGTATCCTCAGCCCTCTGCCGCTCAGGCCGGTTAAACGCGCCAAGCTACAGTTAGAGGCACAATGGACAATGGTGGCCTGCGGACGCACACGCGATCAGCTCGAAATGACGCGAGCCGCTCGACGATTTCTTAGCAGCCATGGGTATTTGCCGTTGCGTCCTCGTTCGCTGAATTTCTGA
- Protein Sequence
- MLGYLRRKCCCLTSLHSKASPPWVVPSALINTAAEQATKSRSGYDSSSGGDSDNEYSGSVCRGVANQSQNPASTNASTHGQGKHINKGRWTKEEDALLKQLVSNAEQRGTGLRWDAVAGHFPDRSDVQCQQRWAKVVNPELVKGPWTKEEDEAVVELVERYGPKKWTLIARHLKGRIGKQCRERWHNHLNPGIKKTAWTEVEDRIIVEAHRRVGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYESEEGRSITGSRGRGRRKATESSSVSKDVGCADEDASSHGRLKPPSTSNENATSLTNVQAHTLNIDQLDWTRAWDNHQQSSQTYQGLLSLNQRTHNTDSRLQSPSKQGTSSTRVKTESISPFTKYFDLQIQGEPTSSRSSEIRLMPMPDLDEISNMAEKERSSPPPILRRRKNTHQQRTGSPDSGNQSDYIIITQHQPEQQHHQQQQQQEEQQQQQQQQQQQTGDNTPSTPIKQLPFSPSQFLNSLSPETSSWPRASTPKGSSPGPLTTPQPTGFRRSQNDGNTPRTPTPFKNALAELERRSGATTQLPATPSRLDALTEIIKQETDRESLAGTSAILQDSGYSTIRRRGKENSAPGGKRARKALCQAWANASQDNSEMSFVVETPSKSLDTSVLFSPASMALEDSFLTAGTSPVKTSHDFASVQRKPNAKRAITFDAFDSPCCILSPLPLRPVKRAKLQLEAQWTMVACGRTRDQLEMTRAARRFLSSHGYLPLRPRSLNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00229952;
- 90% Identity
- iTF_00360831;
- 80% Identity
- iTF_00360831;