Cgig005340.1
Basic Information
- Insect
- Colletes gigas
- Gene Symbol
- Rel
- Assembly
- GCA_013123115.1
- Location
- WUUM01000006.1:9873791-9878498[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-40 2.6e-36 125.0 1.0 1 168 85 274 85 275 0.89
Sequence Information
- Coding Sequence
- aTGCCCGaagtttatgaaaattatatggTTTTACAAAATGGATCTGAAAGCCAGGATTATATTTCGTATGGACAtgATTTACAGACAATGAACAGCCAAGGTCTATGTAGTCCATTTAATGGATCTCAAGGAACTGCAAGTGTTGGTTCACCCATGTCAGCTTCATCATCATTACAaggtattaattttattagtagTGTATTTATTCAAGAATATTCAAACTTAGTTTTTTCAGTGCTAGGAGAACCACATATAACAATTTTAGAGCAaccaattgaaaaatttagatttcGATACAAATCAGAGATGATAGGACCACATGGAAGCTTGGCAGCTTCGAATAATGTTAATGGTCGTAAGAAATATGCACCATCAGTTCAACTACATAATTACTTGGAAAATGCAGTAATACGTTGTACACTGGTTACATCTGATGGAAGTCAAAGAATACGTCATGCTCATAGGTTAGTGTGTAGAAAAGATGGCACTGATTCTGATGATCCACATCATGCTAAAGTTTCTTGTGAATCTGGATTCACTGCAACATTTCATGGTATGGGAATTATACATACAGCAAAGAAGCATGTTAGGGATGAACTTGTAAGAAAGATGCGTATGGATGCTTTAGAAAAAAAGAGATGCAAGAACATAAATGCAACTCTTAGTACTCGGGAAGAAGCACAAATCAAAGCTGATGCAGAATACTACCAAAAATGTGTGAATCTGAATAGTGTTGCATTATGTTTTCAAGCATTTATTGTGGATAAACATGATATTATGAGACCAATAACAGAACCTGTTTACTCAAATGCTATTAATAATCTTAaaaGTGCGTTGACAGGAGAGCTTAAAATATGTAGGATTGACAAATATACCAGCAGTGTTGAAGGAGGGGAAGAAGTATTTATACTTGTAGAAAAAGTAGGAAGAAAGAATATTcggataaaattttttgaggTAAATGATGATGATTATGAAATTTGGAGCGCATATGGACGTTTTTCAGAATTGGACGTACATCATCAATATGCAATTGTATTTCGAACTCCACCATACAGAGATCTTAATATTACTTCTCCAATAGAAGTTTTTATACAATTAGAGCGACCGTCTGATGCAGATTGTTCAGAaccaataaaatttacttacaAACCAAGTGATAGAATTATAGGCAAGAAACGTCAAAGAATGTCCTATTCAGGAAGTGCAGAATTATCTCATATAATATCAACTTTTAATAATACTGAAATGGGAAATACATCAGGAATATTAGGTAACGACAGTCgagaaatttctaaagaattAAGAGAGATGTTGTCCGAGGGTTGTTCATCAACAGAGTTCATGGACTTTCTTGAAAATATGGATTTTGATACATATCAACAATTTATCGACACAGATGACAAGAATATGCTAGCTCACGATGGTCCATTGTGTAAGGAATATCAAGCGGATTCAATGTTCCCTAAACACATACTTATCGAAGCTGTAAGATGTATGAAAATGGATTCAAGAAATATGAAAGATCATGTACAAAAGTTACTTAAAGATCGCTCCTCGTATGGGGATTCCCCATTACACGCAGCACTCCGATATGGCCAACGTGATAttgtcaaatatattttaatgttgaTAAGCACTGATAAAGATTGTAAAACACTTGTCAATGGGCAGAATAGTTCtggaaaaACGCCATTGCATTATGCAGTTTTACAAAATCAACCAGAAATTACAAAAGCATTACTCATGCTTGGAGCTGATCCAAATCGATCGGACGAACATGGATCTACTCCATTACATGCTGCTGTAAGAATCCCTCAAGCTGGTGCTTGTGTTAATGCCTTATTGGCAGAAAAGACAGTtgatattgaaatttgtaatgaTGCTGGATGGACACCATTACATCTTGCAACAGAAGCAGGGTCATATGATGCAGTATGCTCACTTGTTCGAGCTGGAGctaatgtaaataatactGACATGTCTTATGGTCGAACAGCATTACATATAGCTGTAGAAGGCGGGCATAAAGACATTGTTGATTATTTACTCACAAAGACagatatatttgtaaataagaGAAACTTCAGTGGAAATACTGCTTTACATACTGCAGTTGTATATTCTGGAGTAAGAGCAAAAGAATTATGTGCATTGTTAATACAACATGGCGCAGATCCACACATTCAGAATCATAATCGAGAGTCAAATGATGTGGACAAATGGAAATCATCACACGTTGATATAAAAGTGGAAGTTGActctgaaaatgaaaatgaaaatgaaaatgaaaatgaaaacacaGAAGAATCGACTGGACAAACATCATTTGATTTGGCTACAAATAAACCAGATATTTTACAGCTTCTTATTGGTCAGACTGACGAAGTTGCAAATGAAACGGGCATGGTTCCTACTAAATTAGAAGCAGAAGAAACGGAGTTACAAACAAATTGGTTAActaatgaaagaaaagaaaaattatctgTTATTCTAGATAAAACACAAGGATGGAAGAAGCTtgcaaaacatttaaattttcaatacgttttaaatacaattcaaCAGACTTCTTCAAGTCCATCTTTACTTCTTCTAAATTACATTGATGTACAGGCATCTTTATCTCTTACTGAGATGGAATCTGTATTAAGAGATTTTGGAGAAGAAGAAGCAGCAGattatattaatgaaatctcatctaatttgcaaaatacatttggttatttttga
- Protein Sequence
- MPEVYENYMVLQNGSESQDYISYGHDLQTMNSQGLCSPFNGSQGTASVGSPMSASSSLQGINFISSVFIQEYSNLVFSVLGEPHITILEQPIEKFRFRYKSEMIGPHGSLAASNNVNGRKKYAPSVQLHNYLENAVIRCTLVTSDGSQRIRHAHRLVCRKDGTDSDDPHHAKVSCESGFTATFHGMGIIHTAKKHVRDELVRKMRMDALEKKRCKNINATLSTREEAQIKADAEYYQKCVNLNSVALCFQAFIVDKHDIMRPITEPVYSNAINNLKSALTGELKICRIDKYTSSVEGGEEVFILVEKVGRKNIRIKFFEVNDDDYEIWSAYGRFSELDVHHQYAIVFRTPPYRDLNITSPIEVFIQLERPSDADCSEPIKFTYKPSDRIIGKKRQRMSYSGSAELSHIISTFNNTEMGNTSGILGNDSREISKELREMLSEGCSSTEFMDFLENMDFDTYQQFIDTDDKNMLAHDGPLCKEYQADSMFPKHILIEAVRCMKMDSRNMKDHVQKLLKDRSSYGDSPLHAALRYGQRDIVKYILMLISTDKDCKTLVNGQNSSGKTPLHYAVLQNQPEITKALLMLGADPNRSDEHGSTPLHAAVRIPQAGACVNALLAEKTVDIEICNDAGWTPLHLATEAGSYDAVCSLVRAGANVNNTDMSYGRTALHIAVEGGHKDIVDYLLTKTDIFVNKRNFSGNTALHTAVVYSGVRAKELCALLIQHGADPHIQNHNRESNDVDKWKSSHVDIKVEVDSENENENENENENTEESTGQTSFDLATNKPDILQLLIGQTDEVANETGMVPTKLEAEETELQTNWLTNERKEKLSVILDKTQGWKKLAKHLNFQYVLNTIQQTSSSPSLLLLNYIDVQASLSLTEMESVLRDFGEEEAADYINEISSNLQNTFGYF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00359990;
- 90% Identity
- iTF_00359990;
- 80% Identity
- -