Basic Information

Insect: Colletes collaris
Gene Symbol: znf423
Assembly: GCA_030068185.1
Location: JASGYR010000259.1:4860765-4871096[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.1 3.7e+02 2.7 1.6 14 23 10 19 7 19 0.91

2 19 0.00023 0.028 15.7 0.2 1 23 25 47 25 47 0.99

3 19 0.00073 0.087 14.1 0.5 1 23 203 226 203 226 0.96

4 19 0.44 52 5.4 0.0 2 23 237 259 236 259 0.88

5 19 0.21 26 6.3 0.1 3 23 322 342 321 342 0.97

6 19 0.012 1.5 10.3 0.3 1 23 354 376 354 376 0.96

7 19 0.013 1.5 10.2 0.3 1 23 385 408 385 408 0.92

8 19 3.9 4.6e+02 2.4 0.2 1 23 413 436 413 436 0.91

9 19 0.24 28 6.2 2.0 2 23 510 531 510 531 0.96

10 19 0.0058 0.7 11.3 0.2 1 23 536 559 536 560 0.94

11 19 3.4 4.1e+02 2.5 0.1 2 23 624 647 623 647 0.81

12 19 0.00015 0.019 16.2 0.6 2 23 663 685 662 685 0.96

13 19 0.016 1.9 9.9 1.5 1 23 694 717 694 717 0.93

14 19 1.6 1.9e+02 3.6 0.1 2 23 725 746 724 746 0.96

15 19 0.0076 0.92 10.9 0.1 2 23 907 929 906 929 0.93

16 19 0.077 9.2 7.7 0.3 1 23 939 962 939 962 0.96

17 19 9.9 1.2e+03 1.1 0.3 2 23 975 996 974 996 0.89

18 19 0.49 59 5.2 0.1 2 23 1005 1027 1004 1027 0.93

19 19 0.11 13 7.2 3.0 1 23 1034 1057 1034 1057 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.1	3.7e+02	2.7	1.6	14	23	10	19	7	19	0.91
2	19	0.00023	0.028	15.7	0.2	1	23	25	47	25	47	0.99
3	19	0.00073	0.087	14.1	0.5	1	23	203	226	203	226	0.96
4	19	0.44	52	5.4	0.0	2	23	237	259	236	259	0.88
5	19	0.21	26	6.3	0.1	3	23	322	342	321	342	0.97
6	19	0.012	1.5	10.3	0.3	1	23	354	376	354	376	0.96
7	19	0.013	1.5	10.2	0.3	1	23	385	408	385	408	0.92
8	19	3.9	4.6e+02	2.4	0.2	1	23	413	436	413	436	0.91
9	19	0.24	28	6.2	2.0	2	23	510	531	510	531	0.96
10	19	0.0058	0.7	11.3	0.2	1	23	536	559	536	560	0.94
11	19	3.4	4.1e+02	2.5	0.1	2	23	624	647	623	647	0.81
12	19	0.00015	0.019	16.2	0.6	2	23	663	685	662	685	0.96
13	19	0.016	1.9	9.9	1.5	1	23	694	717	694	717	0.93
14	19	1.6	1.9e+02	3.6	0.1	2	23	725	746	724	746	0.96
15	19	0.0076	0.92	10.9	0.1	2	23	907	929	906	929	0.93
16	19	0.077	9.2	7.7	0.3	1	23	939	962	939	962	0.96
17	19	9.9	1.2e+03	1.1	0.3	2	23	975	996	974	996	0.89
18	19	0.49	59	5.2	0.1	2	23	1005	1027	1004	1027	0.93
19	19	0.11	13	7.2	3.0	1	23	1034	1057	1034	1057	0.97

Sequence Information

Coding Sequence: ATGTCCGGTAACTTATGGACGCTGACCGACCACCTGAAAATCCACATGAAGACTCACGACACCCAGAAGCCCTACCAGTGTACAGCTTGTTCGCGAGGCTACAACACAGCAGCAGCGTTAACGTCGCACATGCAGTCCCATAAAAAGCACCATCATCAGTCCCAGGGTACGGCCAAGCTGCAGGACGTGGATTACGGGAGGCGAAGCGTTTCCTCGCACAGCACGTCGTCGCCGCCGGTTCCAAGTTCCCCGTCGCCGTCCTTGAATCTAACCTTGAATCCGAAGGCTGGCCTGAAAAGCTCGCAAGGCAGCGCTTCCACCACGCCGATCCTGAGCTCGCCTCTGAAGCTCGCTTGCATGTACTGCACCAGGGACTCGTTCAGTTGCATGCAGCAGCTGCAGATGCACGTGCATACGATGCACCAAGCGATCCTGAGCGGAGAGAGCGTGGCGGTGCCGCCGTCGCCAAGCAGGAGCAACGAGCAGCTCGCCTATCAGCGCGACAAAGCGTCGAATCATCGGGCGGAAGCGACGTCCAAGGATCACGAGAGGAAATACCAAGAGGAGTCGGACAGATCGATGGAGAAGGAGCACTACGAGAACGCATTCACCTGTAATCAATGCACCATGAAGTTTTCTGCGTTGAGTTCGTTGAGGGATCACTTGATCTCCATTCACAGAACCGACGGTTTCAGTTCCGCGCTGATGATGTGTCCCCTGTGCGGAATCCCTTGCGCTTCGGCGGCTGCCTACGCGGAGCACTACGTTCTCCAGCACTGCGAGAACCGACGGATCGGGCCTATGGAGGGTCGAGAGTTCCTGAACAAAAGCAACGGGAGTTACGGAGACTCGAAGAGCTCGAGGAGCCAAAAGATCAGGGAGCAATCGGCCTCGGAACCAGCGGATCTGACAAGCAAGCATTCCAGGCCGACGGAGAGCAGCTACACCGCGGGCACTCTCCTCTGTGGTCAGTGCGGAGCTGCTCTGAAGGACTTCGAGTCGTTCAGGGAACATCTGGCCAGGCACCTGCAGGCGGATCACAGAAACGACGCGATACGACATCCCTGTCCAAAGTGCGAGGCTGCTTTTCAAGACAGGGAGGAAATGCTGTCGCATTTAACAAAACACTACCTCGGTCAGATCAGCAAAGAGTACGCCTGCGGGGCCTGCAAGAAACTTTACGCTCATCCCGACTTGCTCCAGAGGCATCTGCTCGACAGCCACGCTCATCATCTCTACAGATGCGCTCTGTGCAGGGACACTTTCGACTCCAGGGTGGCGATACAGGTTCACTTCGCGGTGAAGCACAGTCAGGAGTGCAGGATATATCGTTGCAACGCGTGCACCGTTCCCAATAACGAGAACTCGCCGGGAAACGCGCCCGGTGAGGGAAGAAGCTTCTTTAGGAGCGAGTCGGAGATGGCGAGTCACGTTAGAAACGTTCACGCGCCGCCCACGGTGTCCAACAGCAGCCCCATAGCGAGGAGTCCGGCTTCCACGCCTGGCATCACGGGAAACTCCGGACCCAGGTGCGTTTTCTGCGGTATCTGCTGCAACTCGGAACTGGAGCTGCAACTGCACTTGGCCAGTCACTCGACCAGCCTCTACAGATGCCCGATCTGCAGGGAGGGCTTCGCCGTCGAGTTTCTGCTGGACAGACACATCGCCCAAACGCACCATTCCGGCGAACACCAGGCTAGCGTCAGGAGCAACTCCAGGGAGAATGGACGAATAGGAAGACTCCCCAGGTCTCAAGAGGAGTCAAAGTCGCAGAAGAGAGGCCGTTCCCCAGCCTCGAGCAACAACAACTCCCTAAACCAACGTGACAACAACAACAAACGAGCGAACTACACCAGTATAGGGATGCAACAGTGCGAGTTGTGCGAAAGGGGAGAGTTCGCGAACGAAGCGGAGCTCCAGGCTCACAAGAAACTGGCCCACGCGTCGGCCAAGTTGCAGAACAAATCGCTGTCGAGTCTTAGCATGACGTGCGCTTATTGCGGCGAGGTGTGTCGTTCTAGAGCCGAGCTGGAGTCCCACACTAGGATCCAGCATGCCTCGAACGAGCCCGGTGGACGTCACAAGTGCAACATATGCGACGAGGTGTGTCCGTCGGGATCCACGCTCGCCGAGCACAAACTTCAAAAGCATTGCAAGATCCAGCTGAGCGACACCTGTGTCGTTTGCCGCGGCAGCTTGGTCTCCGAATCGCAGTTCCTCGAGCACGTTCAGAGACACAGTCTGGAGAACGTGGACCCTCAACAGAGACTAGACGATTCCCTGCCCCATCTTCCAGCAGCTTGTGTCGTTTGCAGGCAAACGTTGATCAGCGACCTGGAGTGCCGCCTTCACGCCAGGTACCACCTAAAGGCTTCGCCCGGTTCGCAAAGTTCTACGTCCAGTCCCAGTCCTAAACAGAAAAGTCAAAGTCCGGGTTGCTGTCTCTGCCTGAGGGATTATTCCGCCGACGATTTCGTCAGTTTGCCTCCCAATCATATGAGCGGCGGAGGACAGTCTCTGAGAGTCTGCAAATCTTGTTACATTCGTCATTCTCAGGGCCTGCCGATACTGAACTCGCCATACGAGCACGTTAGAGCTAAATGCGACAGAGACTGGATCTCTAGCAAGGATTCCCAATGGGACGGGTCCAGGGATAGATGGGACTCCGAACGCGTGTTTAAAATGGAAGAGAGGACGAACGAGGTAAACGATAACAAAAGATGCCAGGATTGCGGGGTGAAGTTCGAGGATCCCGAAGAGGCAGAGAAGCATAGACTCGCGGAACACGAGAAGATTGGATCTGGGTCGAATACCTATACCTGTATACAATGTCAGATGTCGTTTCCAACGGAAGCTAAGATACAGCAACACGTTAGGAAGGAACACCTAGAAGCATCTGGAAGGGCTTCCATCGAGGCATTGCGGTGTCATCTGTGTCTTTTCGAGGCTGGTAGTCCTCTGCAATTGCAAAGCCATTTGATAGAACACACTTTCGCCGGTTGCGCTGCTCTCAGCTGTTACATCTGCCAATCTCTCTTCACCGCGCCTATTGGTCTTCAGAATCATATGCTGCAGGAGCATGGCCTGGGTGCTCGTCCATACGACTGTTCCAAGTGCACCCTCAAGTTCTTCTTCAGGGCCGAGTTGGATCACCACGTGCTGACGTTCCATCGCTTGGAAGAAACGTCCCCGTCCAACGGAAACGTACAGAACGCCATAGAAGCGAAAAGAACCGACGCGGAGGAACAAAATTGTGACGAGGGCGTCACGGTAAAGGAAGAACTGTTGTTGCCGGACGTTGGCGAGGAGGATGAAGAGATCAACGTCGACGAGCAAATGGAACAGGACGACCAGAAAGTTGACAGCCACGCGGAAGCGGATCTGAAGCTAAAAGCCGAGGTCGATGTAGAAACTGCCCCCGACAAGACGGAATCGTGA
Protein Sequence: MSGNLWTLTDHLKIHMKTHDTQKPYQCTACSRGYNTAAALTSHMQSHKKHHHQSQGTAKLQDVDYGRRSVSSHSTSSPPVPSSPSPSLNLTLNPKAGLKSSQGSASTTPILSSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGESVAVPPSPSRSNEQLAYQRDKASNHRAEATSKDHERKYQEESDRSMEKEHYENAFTCNQCTMKFSALSSLRDHLISIHRTDGFSSALMMCPLCGIPCASAAAYAEHYVLQHCENRRIGPMEGREFLNKSNGSYGDSKSSRSQKIREQSASEPADLTSKHSRPTESSYTAGTLLCGQCGAALKDFESFREHLARHLQADHRNDAIRHPCPKCEAAFQDREEMLSHLTKHYLGQISKEYACGACKKLYAHPDLLQRHLLDSHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCNACTVPNNENSPGNAPGEGRSFFRSESEMASHVRNVHAPPTVSNSSPIARSPASTPGITGNSGPRCVFCGICCNSELELQLHLASHSTSLYRCPICREGFAVEFLLDRHIAQTHHSGEHQASVRSNSRENGRIGRLPRSQEESKSQKRGRSPASSNNNSLNQRDNNNKRANYTSIGMQQCELCERGEFANEAELQAHKKLAHASAKLQNKSLSSLSMTCAYCGEVCRSRAELESHTRIQHASNEPGGRHKCNICDEVCPSGSTLAEHKLQKHCKIQLSDTCVVCRGSLVSESQFLEHVQRHSLENVDPQQRLDDSLPHLPAACVVCRQTLISDLECRLHARYHLKASPGSQSSTSSPSPKQKSQSPGCCLCLRDYSADDFVSLPPNHMSGGGQSLRVCKSCYIRHSQGLPILNSPYEHVRAKCDRDWISSKDSQWDGSRDRWDSERVFKMEERTNEVNDNKRCQDCGVKFEDPEEAEKHRLAEHEKIGSGSNTYTCIQCQMSFPTEAKIQQHVRKEHLEASGRASIEALRCHLCLFEAGSPLQLQSHLIEHTFAGCAALSCYICQSLFTAPIGLQNHMLQEHGLGARPYDCSKCTLKFFFRAELDHHVLTFHRLEETSPSNGNVQNAIEAKRTDAEEQNCDEGVTVKEELLLPDVGEEDEEINVDEQMEQDDQKVDSHAEADLKLKAEVDVETAPDKTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684951;
90% Identity: iTF_00361153;
80% Identity: -