Ckir000675.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Collessia kirishimana
Gene Symbol
RREB1
Assembly
GCA_035078785.1
Location
JAWNPV010000134.1:25933-31684[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.044 4.3 8.8 0.8 1 21 236 256 236 258 0.93
2 13 0.00041 0.04 15.2 0.2 1 23 268 290 268 290 0.98
3 13 9.8e-05 0.0097 17.1 7.3 1 23 296 318 296 318 0.98
4 13 2.7 2.7e+02 3.1 4.6 2 19 557 574 557 576 0.97
5 13 0.0052 0.51 11.7 0.0 1 23 715 737 715 737 0.97
6 13 2.4e-05 0.0023 19.1 1.2 1 23 747 769 747 769 0.99
7 13 0.001 0.099 13.9 2.0 1 23 775 798 775 798 0.97
8 13 0.009 0.89 11.0 1.7 1 23 1059 1082 1059 1082 0.95
9 13 0.0001 0.01 17.0 0.3 2 23 1426 1447 1425 1447 0.97
10 13 0.18 17 6.9 6.3 1 23 1453 1476 1453 1476 0.97
11 13 9 8.9e+02 1.5 6.0 1 23 1609 1632 1609 1632 0.92
12 13 0.01 1 10.8 0.5 3 23 1690 1710 1688 1710 0.96
13 13 0.0016 0.16 13.3 4.8 1 23 1716 1738 1716 1738 0.99

Sequence Information

Coding Sequence
ATGCTGGCcacgcaacagcaacagcaaaagtcaAATGCCACACACGGCAGCAGTGAAATGGAACGTCAGCGACGAGATTCCACCACCTCGGAATCATCGCTGGAGCATCTGGACTTGGGACGCACACCAAAGAAACTAAGCAGCGCCAGTGGCGCCCCACAGCCCACATCGACGCCGCACGAGGCCACCTCGGTTGCATCCACAACGCGCAAACGCAAACtgcgccagcagcaacagcaacaacagcagcagcaacagcagttgcaccTGCTGTCCGACGAGGATGAATCGGCCAGTGAggtgctgcagcagcaacagcaacagccacaacagctgGAGACAACGCAACGACCCAGGCCCAAGCAGCGACGCAGTGGCGCCACCAATGCCAGCATCGTGGTTGACTACGGGGCCAGCGATGCCAGCTCGCTGCGTAAAAAGTTCCGTCTGAATCGCAGCAATGCAAGCGCCAACTGCGCCATGGCTGAGCTCTCCGAATCTGGCTTTGTCGATGGCAGCGCCCACAGCGGCTATTtgctaagcagcagcagcaccagcagcagtgcagccgctgctgctgccgttgccagcgCACAGACCGCGGCCTCGAGCAGCAGTTCAGCTTCGGGCGGCTCCTCGCCGCAGGGCGGCATGTGTCTGTCCAGTGCCGAGTCAGGCATTGGGGCCGGCGATGAGCCCATGAAATATCTGTGCCCCATCTGCGAGGTCGTCTCGGCCACGCCCCATGAGTTCACCAACCACATACGTTGCCACAACTATGCCAACGGCGATACGGAGAACTTCACCTGCCGCATTTGCTCCAAGGTGCTGTCCTCGGCGTCGTCCCTGGACCGACATGTCCTAGTGCACACCGGTGAGCGTCCGTTCAATTGTCGCTATTGTCATCTGACCTTCACCACCAACGGCAACATGCACCGTCATATGCGCACTCATAAGCAGCATCAACAGACATCCGCGTCAGGCCaaacccagcaacagcagcagcaacagcagcagcagcgacgtcagcaacaacagcagaacggcggcagcagccatgGGGGCCAGCTGGTGGCGCCAGTGCGCGCCGAGAGCTATGAGAGCGATGCCAGCTGCTCGACGGATGTGTCCAGTGCCAATAGCCAGAGCAGCGGCTcccagaccaacaacaacaacagccacaagacgaacaacaacaacagtagcaacaacggcagccagAAGAACAATGGCCTGGTGGGCAAGCAGCGACGCCTCAAGACCAccattaacaacaacatcataGACGATGGCGATGAGGACGAGGAGCTGCccagacagcgacagcagcccGAGGTAGTCGACCATCAGGAGGAGGCCGAGGATGCCGACGTAGATGAGGATGATGAAATGGAGGGCAACGGCCTTGGCGATGTTCCCACTGAccctgatggtgatggcgaaggtgatgctgatgctgatgccgatgccgatgccgcaCTGCCTCTGTCCATTACCAGCACTCCGGATGTGGCCACCTTGCTCGCTGGCGCCGGTTGTGCCTCCGAGGCCACCTCACCAACACCCAGCCACCTGATGCTGAGCTGTCCTGCCTGCAATGCCTCGGACTTTGATACCTTGGCCGGCCTGTGTAACCATCTGGATGCCCAGCACTCGGATATACCAGCCAAGTGCCGCGAGTGCGATGTGATCTTCGCCTCCCATCGCCAGCTGCAATCGCACTGCTGTCGCGGTGCCCTCGACCAGCTACCGCCTATGCCATCGAGCAGTTCGCCGCTGCACGAGGATCAGCAGGAGGAACGTAAGCACAGTGCCGACCTAGACGTGGAGACCGAGGCAGAGAAGCAACAGCGCGAGGACTTTTTCCACCAACTGTATCTAAAGGGCAAGACAGCCTCGGTGTCGGTCTCGCCATCGCCCTCACCCATCAAGCACGAGCCGGCAGACAGCAAGGATCTGGCCGACATACAGAGCATCCTGAACAtgaccagctccagctgcacaTCCAGCTTTCTGCGTAACTTCGAACAGTCGGTCAACACGCCCTGCTCCAGCCAGTACAGCCTGGATGGACGCGACGGCGAAGAGGAGGCCCAGGATGCCTTCACCTCTGAGTTCCGACGCATGAAACTGCGCGGCGAGTTCCCCTGCAAGCTCTGCCCAGCGGTCTTTCCCAACCTACGAGCTCTCAAAGGACACAACCGGGTCCATCTGGCGGCCGTTGGCCCCTCTGGCCCGTTCCGCTGCAACATGTGTCCCTACTCCATCTGCGACAAGGCCGCCCTCGTGCGCCACATGCGCACCCACAACGGCGATCGACCCTACGAATGCGCCGTCTGCAATTACGCGTTCACCACCAAAGCCAATTGCGAGCGACATCTGCGCAACCGTCATGCCAAGACATCTCGCGAGGACGTCAAGCGCGCCATTGTCTATCACCCGGCCGAGGATGCCAGCTGCGACGACGGCAAGTCCTCCCGCCTGGGAGACCCTTCCGACCTGGCCGATCTCAGTTTCCGATCAAACTCACCACAGCCCCAGCAGCCCAGCCTAGAGAGCTCGGCGGCGGTACCATCCCAGCTGAAGCACATGCTCATGACGGAGCCCATCAAGCCACAGACCCAGCAGCCACCGCTGAAGATTCAGGTCAAGAGCCTGGATCAGCTGGTGGACAAGCCGCTGTCCAGTTCCATTGCCAACTCTGCCtccgcctctgcctctgccatgGATCTCAGCATGGATGTTCTGGATCTAAGCAAGAAGCCTTCGGCTGCAGCCTCCGGGGCAGGCACTGGACCGCCTGCCGCGTCACCCACACCCACTCCAGTGCCAGAGCTGGCTGCCGCcttggagcagcaacagcagcagcaactcctGTTGGCCCCCACCCAGCTGTTTGGGGCCGGCGATGCCGCCTCCCAGTACATGCAGCAGTTGTTCCGCAATCTGATGTTTCATCAGTCGCCGGCATTTCCGTTCTTCAACTTCATGGCTCCGCCAACTGGCGCCGAGAAGCCACCCCAGCTCAGCCCCCAGCCGCCGCGTCTGCCGCCCATACCAGTCGGCGTCGGCATGGGTGTCCCCGTGCCAGCCGGCGGTCCCGTCAAGATGGTCATCAAGAACGGCGTTCTGATGCCCAAGCAGAAACAGCGTCGCTACCGCACCGAGCGTCCCTTTGCCTGCGCTCACTGCTCCGCTCGGTTCACCCTGCGCTCCAACATGGAGCGCCATgtgaagcagcagcatccacagTTCTATGCCCAACGACAGCGTGGCGGCCACCATGTGATGCGCGGACGCGGCGCCTCcaatgctgcagcagcagcggcagccgcagcagcagccgctgccgccCTGGGCGGCCACCACGGTGGCGGACATCACCATGGCGGCATGGGCAATGCACCCATCTCCGAGCAGGTCAAGTATGCCATCCTGGCCCAGCAGTTGACGCGCAAAGACACTGATCTGCTGCATCAGGCTCTGGCCCACGGCTCCAGCAGTGTCGCCAACAATCCTCTGCTGCACTTTGGCTACGCAGccggggcagcagcagcagctgcggcagGCAACGGTCATGCGGCAAGTGCAGGTCAAGGGCAAAACCCAAATCCCGCCAGCGCCATGGATGATGACGAGCCCAAGCTGGTCATTGATGAGGATGAGGCCGAGGACATTGAAGACTTCGATGAGCCCGACGAGGAggacgatgaggatgatgtCGATGAGCTGGAGCAGGCGGAGGAAGAGCGCGAACGGGAGCAGCTGTCTCTGCCCACTGAGGTGGCCAAGAAGGTGGCAGACACCATACTGGAGCAGGCAATTAAGGCGGGCAAGTCAAGTCCCAGCCCAGCTCAGGCACAAGTCCAGGCGCCTCTCAGTCGAGTTGCCACGCCCAAGCCGCAGCAGAAGGAGGCGACCCCACCGCCGCCACACACCATGAAGACCATGATTGCCCAGGTAGAGTCGGTGGCCAAGTCGCTAAAGGACGTGGCCAGCTCGGCATTCAAGGATGAGTCGGTTGACCTGGTGCCGGTGGCCAAACTGGTGGACAACGCCACCAGCAGCCAAATGAGCTTGAGCTTCAACAGCTACTTTCGTCCCAGCGACGTGGCCAACCATATGGAGCAGAGCGACGAGGAGGGACTTGTCGCCTCCGGCAGCGCCAGCGAGAGCAACAACTCTGGCACTGAGGAtgtgaccagcagcagcagcggcggcagcggcaacgagCCCAAGAAGAAATCCGCCTACAGCTTGGCCCCCAACCGAGTGTCCTGTCCGTACTGCCAACGCATGTTCCCCTGGAGCAGCTCGCTGCGTCGCCATATACTGACCCATACGGGTCAGAAGCCCTTCAAGTGCTCCCACTGCCCACTGCTCTTCACCACCAAGAGCAACTGCGATCGGCATTTGCTGCGCAAGCATGGCAACGTGGAGTCGGCCATGTCCGTCTATGTGCCAGCCGAGGATGTCAACGAGCCCATTCCAGTGCCCAAATCCGTTGAGGAGAttgagcaggaggagcagcgtCGTCGCCGCAAGGAGCAGGCCGAGCTAGAAGAGCGCTTAGAACGAGAGCGACGCGCCCAGGAGCAGCTACGTCAGCAGGAACGGGAACGGGAACGTGAACGCGAACGTGAACGTGAAAGGGAGCGGGAACGGGAACAGGAGCGTGAAAGGGAGAAGCTGATCCAGTGCCTGGCAGCTGCCCAATTGACACAGCAAATCAAtgccgctgcagcagccgtTGCTTCTACGGGAGCCGGCGCTGGAGCCGGCACTGGAGCCGCTGGAGCTGAGGCCAACGGCGGTGATCTGCCCTACAAGTGTCACCTGTGTGAATGCTCCTTTGCCGAGCGCGTCCAATGCCTGGATCACATCAAGCAGACGCATGCCCATGAGTTTGCCCTCCTGCTGGCCAAAGGCGCCATTGAAACAGAAGCCCTGGACACCCCACTCACCACAGGcatgggcaatggcaatggaggCAGCGGAACCATTTCCGACGACGAGGCCGGCAGTGTGCGGGGCAAATATCCCGACTACAGCAACCGCAAGGTGATCTGCGCCTTCTGCGTGCGTCGCTTCTGGTCCACCGAGGATCTGCGTCGTCATATGCGCACCCACTCAGGCGAGAGACCCTTCCAGTGCGAGATCTGTCTGCGCAAGTTCACGCTGAAGCACAGCATGTTGCGGCACATGAAGAAGCACAGCGGACGCACCCTTAACGGTGATCTGGGTGGCTCCGATTGTTCCGATGATGAACAGGCAGCCACTCCGCCGGCCACTCCTATGCCTCTGCCCTCAACTGCctcctccaacaacaacaataacaacaacaacacttgccacaccaacaacaacaacaataataacaacaacaacggcagcagcagcaaactgGGCCTGCGACTGCCCAAGCTGCATGAGCTGCTGGACAAGGCGAACGAATGGCGCGCCAGCCGTCTAGGTGAGCACAAAGAGAACATAGGCGAGACACCCACAACGCCAtcggtggcggcagcagccgctgcagtGGCTAGTGGCGATCTGATTGGCAACCTGCTGGGCATCAGCGATCAGGGCATTCTCAACAAGCTGCTATCCTCGGCGGATGAGGCCGCCAAGCTCCTGGGCGTGGAcaagtaa
Protein Sequence
MLATQQQQQKSNATHGSSEMERQRRDSTTSESSLEHLDLGRTPKKLSSASGAPQPTSTPHEATSVASTTRKRKLRQQQQQQQQQQQQLHLLSDEDESASEVLQQQQQQPQQLETTQRPRPKQRRSGATNASIVVDYGASDASSLRKKFRLNRSNASANCAMAELSESGFVDGSAHSGYLLSSSSTSSSAAAAAAVASAQTAASSSSSASGGSSPQGGMCLSSAESGIGAGDEPMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQQTSASGQTQQQQQQQQQQRRQQQQQNGGSSHGGQLVAPVRAESYESDASCSTDVSSANSQSSGSQTNNNNSHKTNNNNSSNNGSQKNNGLVGKQRRLKTTINNNIIDDGDEDEELPRQRQQPEVVDHQEEAEDADVDEDDEMEGNGLGDVPTDPDGDGEGDADADADADAALPLSITSTPDVATLLAGAGCASEATSPTPSHLMLSCPACNASDFDTLAGLCNHLDAQHSDIPAKCRECDVIFASHRQLQSHCCRGALDQLPPMPSSSSPLHEDQQEERKHSADLDVETEAEKQQREDFFHQLYLKGKTASVSVSPSPSPIKHEPADSKDLADIQSILNMTSSSCTSSFLRNFEQSVNTPCSSQYSLDGRDGEEEAQDAFTSEFRRMKLRGEFPCKLCPAVFPNLRALKGHNRVHLAAVGPSGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTSREDVKRAIVYHPAEDASCDDGKSSRLGDPSDLADLSFRSNSPQPQQPSLESSAAVPSQLKHMLMTEPIKPQTQQPPLKIQVKSLDQLVDKPLSSSIANSASASASAMDLSMDVLDLSKKPSAAASGAGTGPPAASPTPTPVPELAAALEQQQQQQLLLAPTQLFGAGDAASQYMQQLFRNLMFHQSPAFPFFNFMAPPTGAEKPPQLSPQPPRLPPIPVGVGMGVPVPAGGPVKMVIKNGVLMPKQKQRRYRTERPFACAHCSARFTLRSNMERHVKQQHPQFYAQRQRGGHHVMRGRGASNAAAAAAAAAAAAAALGGHHGGGHHHGGMGNAPISEQVKYAILAQQLTRKDTDLLHQALAHGSSSVANNPLLHFGYAAGAAAAAAAGNGHAASAGQGQNPNPASAMDDDEPKLVIDEDEAEDIEDFDEPDEEDDEDDVDELEQAEEEREREQLSLPTEVAKKVADTILEQAIKAGKSSPSPAQAQVQAPLSRVATPKPQQKEATPPPPHTMKTMIAQVESVAKSLKDVASSAFKDESVDLVPVAKLVDNATSSQMSLSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSGGSGNEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPAEDVNEPIPVPKSVEEIEQEEQRRRRKEQAELEERLERERRAQEQLRQQEREREREREREREREREREQEREREKLIQCLAAAQLTQQINAAAAAVASTGAGAGAGTGAAGAEANGGDLPYKCHLCECSFAERVQCLDHIKQTHAHEFALLLAKGAIETEALDTPLTTGMGNGNGGSGTISDDEAGSVRGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGRTLNGDLGGSDCSDDEQAATPPATPMPLPSTASSNNNNNNNNTCHTNNNNNNNNNNGSSSKLGLRLPKLHELLDKANEWRASRLGEHKENIGETPTTPSVAAAAAAVASGDLIGNLLGISDQGILNKLLSSADEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00804650;
90% Identity
-
80% Identity
-