Cbeh028552.1
Basic Information
- Insect
- Colias behrii
- Gene Symbol
- ZFY
- Assembly
- GCA_029959075.1
- Location
- JARWMB010000028.1:6219416-6222000[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00022 0.021 16.2 2.8 3 23 134 155 132 155 0.96 2 18 6.2e-05 0.0059 17.9 0.9 1 23 164 187 164 187 0.96 3 18 0.025 2.4 9.7 0.4 2 23 200 222 200 222 0.97 4 18 0.00066 0.063 14.7 0.8 1 23 231 254 231 254 0.96 5 18 0.0013 0.13 13.7 0.9 1 23 266 289 266 289 0.96 6 18 0.00015 0.014 16.7 1.2 3 23 319 340 317 340 0.95 7 18 0.00011 0.011 17.1 1.3 2 23 350 372 349 372 0.97 8 18 0.057 5.5 8.6 1.0 2 19 377 394 376 396 0.93 9 18 0.0012 0.12 13.8 0.6 2 21 402 421 402 424 0.94 10 18 0.00034 0.033 15.6 2.0 3 23 434 455 433 455 0.96 11 18 0.0025 0.24 12.8 3.0 1 20 460 479 460 483 0.91 12 18 0.0037 0.36 12.3 0.4 2 23 494 516 493 516 0.89 13 18 0.0002 0.019 16.3 1.1 1 23 541 564 541 564 0.94 14 18 3.4 3.2e+02 3.0 0.6 2 23 571 592 570 592 0.81 15 18 0.0058 0.56 11.7 0.8 2 23 598 619 597 619 0.97 16 18 6.3 6.1e+02 2.1 3.2 3 23 627 649 625 649 0.92 17 18 0.012 1.2 10.7 0.2 1 23 685 707 685 707 0.97 18 18 0.26 25 6.5 2.4 1 23 713 736 713 736 0.96
Sequence Information
- Coding Sequence
- ATGACTGATAAAGTTGATATAAAAGTCAAAAAGATCGACGAAAGAAAGGATCCCACTTTACTCTTGCCAGAAGAACcaatgtcatacgaaataaaGCCAAAAaggaaaaagaaaaagaaacttCAAGAAGACCCTTTCAAAGATATTGAAGAAAACGTAAAATTACCAACAGTCGCTGTGTTCGATCCATCGTCTGATTCTGTATTGGATCCAGAAGTAAATATAAaagttgaaaatattgaagttgaATTGGATTTTAATGATTTTGCAAATGATCATGGCTTAATGATGGGTACAAACAGTGATGACAGCCAACCCGAGCCCATAGTCAAACTAGAACAAGATAATAAAGAAGCTACCCTTCTAACGTTTGAAAATATCGTCAACGATAAATCAATTTGCAAAGTGTGCCATCTAGTCTTTCGAACGCCACAAACATTACGAATGCATCAGAAAAGAAAGCACAAGGTGTTCAGACGGTTGTTTAAACATATATGTGATTATTGTGGCATGTCGTATGAGACGAAGAACAGTTTAGGAGCGCACATTAGAAGGAAGCATGGACCGGATTCCACCCCTGATGATAGGGAAGAGAGAACATGCGATGTGTGTGCACTAGTCTTTAAAGGCATGGCTAGATTGCGTATGCATATGCGACGAAAACACGGCTCTTTTCAAGAGTCCTTCAAGCATATTTGCGAGGACTGCGGCCTGACATACGATAAGTACAGAAGTTTAATAGTACACATACAAAGAAAGCACTCCAAATCAGACGCGCCAATAGCAGATCAGTGGTTCAACTGTCCGTTTTGTCCGAAAGGATTCGGTAAACGGGAAACTTATGTACGACATGTACAGAGAAAACACAGGGTAAATGATGAAGAAACAAGCAAGAATCAAGAAATTGGACAAGATATTGAGAAAGTGGAAAGCACGGAAACAGGAGAGATATGTTGTGCTGAGTGCCCGTTGGTTTTTTCATCCTTGAACTATTTAAAACTGCATATGAGACGAAAGCATAACGCCTTTAAGGATAACTTTCGACTGAAATGTAAAATATGTAACTTGTCTTATGATAAAATAGAGAGCTTAAAGCGCCACATTCGAAGAAAACATGACAAGGGGTCGTATTGCGATGTTTGTAACAAGCAATTTGATACTCGAGAACTGTACTTAAATCATTCCCACGAAAGATTGGTAAGAGAATGTACAATTTGTGGATTAATATTTGCGTCCCAAAGTGGTCTAGGTAAACATTTACGATGTACGCACAAGATTGTTCAACCGAAGACTGTTTTCTGCCATATTTGTAACGAGGGTTTCAATGATAAACGTCAATTAAAGCTGCATTATTTAAGAGTCCATTTAAATGTATCTTACACTtgtcaattttgtaaaaaaGTGTTCAAAGCGAAGGAGAGTTACAGACGCCATGTTGTTTTTAAGCATCAAAACAAACGTCCAAATAGTGAATTGCAAACCTGTGATCAATGTTCTGAAACATTCTCTGACGAGTTTGAATTAAGTCGACATTTTGATTTAGCTCATAGGCGAACGGAGGGAACACAAGAAACAAATAATGTAGTTATTAAAAAAGAAGATGCAGATATACCGAATTCATTCCAATGCACAAAGTGCCCGGAAAACTATACGTCTTGGAATCAATTGAAATTGCATTATGAGCAGAACCATTACATCTTAGCCGAAACACAATGCCAAGTGTGTGGCGAAATAATACCTGGCAACGAATTACAGAAGCACATGAAAGATGCGCATACAGATAACAGCATGCGATGTAGATATTGTGAATATGTTACAAATAATAGAGCGAGTATGACCCAGCATATTTTAAGGCATAAGAATGCGACTACGTTGAACTGTCATTTTGAGAATTGTAAATATAAGACGTTTTATGAAGGTGCAATGGAGAAGCATAAGCGTAAGCATGAAGATCAGGGTGTCAAGTTACAGTGTACCCAGTGTCCGTTTCAGACGATGAATAAGTATATATTAAAGTATCATGAAGAAGCGCACATGACGGGTAAGAAACGGTATTCGTGTGATCAATGTGATTATGCAACCGTTTTGCCAGCGAACTTAGTTCAGCACAAATATAAACATTCCACAGAAAAGAGATTTAAATGCGAAATGTGTCCGTTTGCTACAAAGTACAATACGTCGTTACGTTTTCATGTTAAGAAAAAACATTGTGATCTCCCATCTTAA
- Protein Sequence
- MTDKVDIKVKKIDERKDPTLLLPEEPMSYEIKPKRKKKKKLQEDPFKDIEENVKLPTVAVFDPSSDSVLDPEVNIKVENIEVELDFNDFANDHGLMMGTNSDDSQPEPIVKLEQDNKEATLLTFENIVNDKSICKVCHLVFRTPQTLRMHQKRKHKVFRRLFKHICDYCGMSYETKNSLGAHIRRKHGPDSTPDDREERTCDVCALVFKGMARLRMHMRRKHGSFQESFKHICEDCGLTYDKYRSLIVHIQRKHSKSDAPIADQWFNCPFCPKGFGKRETYVRHVQRKHRVNDEETSKNQEIGQDIEKVESTETGEICCAECPLVFSSLNYLKLHMRRKHNAFKDNFRLKCKICNLSYDKIESLKRHIRRKHDKGSYCDVCNKQFDTRELYLNHSHERLVRECTICGLIFASQSGLGKHLRCTHKIVQPKTVFCHICNEGFNDKRQLKLHYLRVHLNVSYTCQFCKKVFKAKESYRRHVVFKHQNKRPNSELQTCDQCSETFSDEFELSRHFDLAHRRTEGTQETNNVVIKKEDADIPNSFQCTKCPENYTSWNQLKLHYEQNHYILAETQCQVCGEIIPGNELQKHMKDAHTDNSMRCRYCEYVTNNRASMTQHILRHKNATTLNCHFENCKYKTFYEGAMEKHKRKHEDQGVKLQCTQCPFQTMNKYILKYHEEAHMTGKKRYSCDQCDYATVLPANLVQHKYKHSTEKRFKCEMCPFATKYNTSLRFHVKKKHCDLPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01193786;
- 90% Identity
- iTF_00358855;
- 80% Identity
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