Cbeh001155.1
Basic Information
- Insect
- Colias behrii
- Gene Symbol
- -
- Assembly
- GCA_029959075.1
- Location
- JARWMB010000001.1:15764594-15764944[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-09 9.9e-07 29.3 0.0 3 36 16 49 15 54 0.90
Sequence Information
- Coding Sequence
- ATGCCTCGAAACTACCAACGTAAAACGGTAACAAAATATAACGTGGAAGATCTAAAAAGAGCCATTGAAGATGTTAAGAGCAAAAAGTTAACCTTAGGCAAAGCGTCTACTGTATATTCGGTGCCTAAAACCACAATATTTGACCACATGAAGAAGATGGTCATTAAACAACCAAGGTGTGGGAGAAAATCCGTCTTCTCGGATCTTCAAGAATTGGAACTAGAAAACCACATTATAAATTGCAGCAAACTGTTTTACGGATTAACCATAAATATGGTTCGTAAAATTGCATTTAGATTCGCCAAAGAGCGCCAAAGAAAATATAGAGTATTTTTGCATTTTTTGTCATGA
- Protein Sequence
- MPRNYQRKTVTKYNVEDLKRAIEDVKSKKLTLGKASTVYSVPKTTIFDHMKKMVIKQPRCGRKSVFSDLQELELENHIINCSKLFYGLTINMVRKIAFRFAKERQRKYRVFLHFLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357394; iTF_00357395; iTF_00357396; iTF_00357397; iTF_00255776;
- 90% Identity
- iTF_00357394; iTF_00357395; iTF_00357396; iTF_00357397; iTF_00255776;
- 80% Identity
- iTF_00255776;