Basic Information

Insect: Colias behrii
Gene Symbol: JARID2
Assembly: GCA_029959075.1
Location: JARWMB010000001.1:12626837-12647733[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.7e-15 1.6e-11 45.4 0.0 18 89 587 654 572 654 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.7e-15	1.6e-11	45.4	0.0	18	89	587	654	572	654	0.85

Sequence Information

Coding Sequence: ATGTTGGATGTGGTCTCTTTCCAAGGTATACACACTCACAAGCAACCAGTTGTACTATTAAAAAGGTTAGAAGATACAAGCCAGCCAAGTTGCAGCAAGAGCAGCGAAAATGGCGAATCTGAACCGCCCAATCGGTACCCAGAACGTTCGAAGAGCAGAAAATCTGTACGGAGGGATCGTAGCAGTGATACAGaAATGGAAGAGTCCGTATCGATAACACCTGTTACTGGAGCTCCTGCCGATTATATGATAGGTATATACaatggaaattttcgatgggccctggagggaaacaTTTGGTTCATCTATGACGTCATCTTTTCGTTTCGTTCGCAAGTATCTGCACGCTGCGCCGTTGATAATCAAGGCTGTGAAGGTGAAGATGATGCAGGCAATTCCAACGGCATACGGGAACCAGTCGCCGTGGAGCTGACATCTCTGGCCGGTATACCAGCTGCAGATGAGGAAGTAGAAAATGTTAAAGGATATGGAAGCATAACGCCTCTTTCTAATACTTCTGGCTGTAGAGCAGATCAGGAAGTTTCTGGAACCGTGAACCAAATTCCTTTTGGTGATTTAacagATATGGAAATGCCTGTGTCCATAAAGATGTCCAATGATCCCGAGGATTATGTAATAaatAACCAAGAATCCCCATTACATGTTGCTGGTACTTCTTCGAATTATGTTACAAATTTACAATTCGAAAATTCTGATGAAGCCATGATGAATGTTAAGATAGAGAAATATGAGAGGACAgATGAAGATGAAAAATTTTCAGACAATTCAGTTATTATTGGTGATAGTAATGGACAGGACGCAGTTACTTATACACCGGcgCCGAACAACTATTGTGCACAAAATATAGACGATGCTTCTCCATCTGTTCAAAATCAAGCAAGTACGCGTAGCAACACGAAAAAAACAAGAAACGAGTCATGCCCCTCGAGGCACATTACTTCTTTGAGGGATATTGTTTGCTGTAGTAATACTGTTCTAAATAAACGATGTAACGCGTGTAAATTCTGTTCAAAAATAAAACTCGTATCGACACTTGTGAAATCACTGGAGTCGTCGAGTTTCAACTTATTACTATCGGATCATATAAATGTTGAAAATCTTCCCACTGATCTCACTGATACCACCAATCCTTCAACATCAGTTTCGTCAActggaaatttaaataattcaaataatacgTGGAATTGTAAACTTGAAGTACCGTTCCCGGAGACCCTGGATGATGATTGTGATGAGACCGTGCAAAATGGCCAATTGTCCGGCACACAACAGCAAGAGACACGTAATCCCAACGCGAGTCCGTCCACTGATGAGACGTCGAAAAATCGGCGGTCTGTTTTCATTCCTTCCTCAGCAGTTCCTGGACCATCTACTAGTACCCGTACCCAGACACCTCCCAATTCCGAAATTTCCAGCGACGATGAAGTATTGTCGAAAATGAGGAAGCAGAAGGAAAATCGGAATATTGAACGACCAAAAATGCAAAATGCTCCCGTTTTCAAACCGACCGCAGAGGAATTTAAGGATCCGATGATATATTTCGAGTCAATACTGCCAAAGGTGGCAGAGTTTGGGTTGTGCAAAGTGGTTCCACCGGAGACGTTCGTCCCACCTTGTAACTTGGATAACGAAATTCGATTTGGGGTCACAAATCAGTATATAGCGCGTATGTTCAAGCGCTGGGGTCCGGCCTCTAAAGAACTTTCCAATATTCGGGCCAATTTGATTGCGCACAAAATGTGCCCCAGACCACCATtgCTTGATGGCCTTGAGGTAAACTTACCAAAACTATTACGAGTTGTGCAAGGCTTGGGTGGATTGAAGAACGTATTCACTAAGAAGAAATGGAATAAGGTTGCTGAGGAGATGAGATACAAAAAACTGATAAAACCGGAAAAGCGCCTTGACCAAATATATGTGAAATTCCTGTTGCCATACGACACGTTGACCAATCAGGAGCGTAATAAGCTGGCTAATCAAGTTAATCGTTTATGGAAGAAGCGTTCCGATAATATGTTAGAGCGAGCTACGAACCCATTACATAGACAGAAACGCATGTTGGCGGAGTCTGATTCGTCCTCCGACGAAGAGTATGGGCCAGATGATGTGAAAATATTGGAGCCATTGAGTGAAACCGAAGACTGTATTATCGCGGGAAAGAATATGAATTTGAAGTTGTTTAAAAAGATCGCCAATAGCGCTGTGGATATAAACGTGCCCACGCGCGTTTGCAACGAGGAGAATGTCGAGAAGATATATTGGAAGCATGTCGAGACTGGCGAGGAGCACGTGTGCGTGTACGCCGCCTCCATAGACACGGACGAGGCTGACTTGGGCTTCCCGAACAATTGTGATCAACCGTACTCGCAACACCCGTGGAATCTGAAGAGACTGAGTGAAAATCCCCGCAACGTTCTAAGTTACCTAGGCCCAGTTGTGGGTATGACGGTGCCAACCCTGCACCTCTCTATGGTGTTCTCTACTAGTTGCTGGCATCGCGACCCACACGGCCTACCCTGGATTGAGTACATGCATGAGGGTGCGCAGAAAATATGGTATGGCATACCAGACGACCAAAGCAATAACTTCCGCAGCGCAGTGGAGATTCTTGGCCCTGCGTTCTGCCAAAACAAATCCATTTGGCTCCCCTCTGACATTACAATGATACCCCCGGAAATGTTACAGAAGTATAACGTATCAATGTGCCGTGCGGTACAAAAACCCCGCGAGTTCATCATAGTGTGCCCCAAGGCTTACTCTTGTTCGATTGCCACAAATTTTGGAGTGTCAGAAAGTGTGTACTTCGCTACAAACAGCTGGATTAAAAACTATGTTCATATATTTAAGgaGTTAACGAATAGTTGTGAACCAGCCATGTTCTCTATTGAAAAGTTGTTATTATCTTTTACACGCGATCAACGTACTCCTATGGATATTTTAAGGCAAATCTACCCGACATTGAATGaagtaataaaaaaagagcTTAAGAACCGTCGTTCGATTAAAAAACTTGGATTTAAGGGTAAAGATATTCCAGAGACACGAGTTCACACCGGTGCCTGGAATGTTCGCGATCAAGATGAGTGCGAACTTTGCAGGGTTACCTTATACCTGTCTAAGGTCAAGGGGATGTTCCAAAAAAAGACTGCGCTTTGTTTGGAACAcggattaaaaatattaaaaaaaaatataaaaccacAATTCCCATTAGAGGTAGAACACATCGTGTCATCCGAGGTGCTGACAGGAATTTTAGAAAACCTACAATTGCGGCTGACTGAAGGAACAatgtaa
Protein Sequence: MLDVVSFQGIHTHKQPVVLLKRLEDTSQPSCSKSSENGESEPPNRYPERSKSRKSVRRDRSSDTEMEESVSITPVTGAPADYMIGIYNGNFRWALEGNIWFIYDVIFSFRSQVSARCAVDNQGCEGEDDAGNSNGIREPVAVELTSLAGIPAADEEVENVKGYGSITPLSNTSGCRADQEVSGTVNQIPFGDLTDMEMPVSIKMSNDPEDYVINNQESPLHVAGTSSNYVTNLQFENSDEAMMNVKIEKYERTDEDEKFSDNSVIIGDSNGQDAVTYTPAPNNYCAQNIDDASPSVQNQASTRSNTKKTRNESCPSRHITSLRDIVCCSNTVLNKRCNACKFCSKIKLVSTLVKSLESSSFNLLLSDHINVENLPTDLTDTTNPSTSVSSTGNLNNSNNTWNCKLEVPFPETLDDDCDETVQNGQLSGTQQQETRNPNASPSTDETSKNRRSVFIPSSAVPGPSTSTRTQTPPNSEISSDDEVLSKMRKQKENRNIERPKMQNAPVFKPTAEEFKDPMIYFESILPKVAEFGLCKVVPPETFVPPCNLDNEIRFGVTNQYIARMFKRWGPASKELSNIRANLIAHKMCPRPPLLDGLEVNLPKLLRVVQGLGGLKNVFTKKKWNKVAEEMRYKKLIKPEKRLDQIYVKFLLPYDTLTNQERNKLANQVNRLWKKRSDNMLERATNPLHRQKRMLAESDSSSDEEYGPDDVKILEPLSETEDCIIAGKNMNLKLFKKIANSAVDINVPTRVCNEENVEKIYWKHVETGEEHVCVYAASIDTDEADLGFPNNCDQPYSQHPWNLKRLSENPRNVLSYLGPVVGMTVPTLHLSMVFSTSCWHRDPHGLPWIEYMHEGAQKIWYGIPDDQSNNFRSAVEILGPAFCQNKSIWLPSDITMIPPEMLQKYNVSMCRAVQKPREFIIVCPKAYSCSIATNFGVSESVYFATNSWIKNYVHIFKELTNSCEPAMFSIEKLLLSFTRDQRTPMDILRQIYPTLNEVIKKELKNRRSIKKLGFKGKDIPETRVHTGAWNVRDQDECELCRVTLYLSKVKGMFQKKTALCLEHGLKILKKNIKPQFPLEVEHIVSSEVLTGILENLQLRLTEGTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00357203;
90% Identity: -
80% Identity: -