Cbeh000964.1
Basic Information
- Insect
- Colias behrii
- Gene Symbol
- JARID2
- Assembly
- GCA_029959075.1
- Location
- JARWMB010000001.1:12730758-12740111[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-15 1.4e-11 45.5 0.0 18 89 500 567 485 567 0.85
Sequence Information
- Coding Sequence
- ATGACTGGAAAAGTACCGAAATCATGGAAACTTGCCAACGTGCAGCCTGTGCCCAAAAAAGGCAGTCGTGCCGACCCCTCCAATTATAGGCCAATTTCAGTTacgtccatactctgcaagactatggagcgtgtaCTGAATAGCAGGCTAATGGCACACCTAGAAGCGAACGATCTACTCAGTGACCGGCAATACGGATTTCGCCGAAATCGGTCCACTGGGGATCTTCTAGCGTATGCCACCTATATCTGGAGTGAGGCCATCGAGAATCATGGTGAAGCACTCGCAGTCTCCCTCGATATCTCGAAGGCCTTCGATAGGGTCTGGCATGATAGTCTTATCGGCAAGCTTCCATCGTACGGTCTGCCTACTGGTTTTTGCGCATGGATCTCAGATTTCTTGAGAGACCGGTCGATTCGAGTAGTCGTCGACGATTTACAATTCGAAAATTCTGATGAAGCCATGATGAATGTTAAGACAGATAAATATGAGAGGACAgATGAAGATGAAAAATTTTCAGACAATTCAGTTATTATTGGTGATAGTAATGGACAGGACGCAGTTACTTATACACCGGcgCCGAACAACTATTGTGCACAAAATATAGACGATGCTTCTCCATCTGTTCAAAATCAAGCAAGTACGCGTAGCAACACGAAAAAAACAAGAAACGAGTCATGCCCCTCGAGGCACATTACTTCTTTGAGGGATATTGTTTGCTGTAGTAATACTGTTCTAAATAAACGATGTAACGCGTGTAAATTCTGTTCAAAAATAAAACTCGTATCGACACTTGTGAAATCACTGGAGTCGTCGAGTTTCAACTTATTACTATCGGATCATATAAATGTTGAAAATCTTCCCACTGATCTCACTGATACCACCAATCCTTCAACATCAGTTTCGTCAActggaaatttaaataattcaaataatacgTGGAATTGTAAACTTGAAGTACCGTTCCCGGAGACCCTGGATGATGATTGTGATGAGACCGTGCAAAATGGCCAATTGTCCGGCACACAACAGCAAGAGACACGTAATCCCAACGCGAGTCCGTCCACTGATGAGACGTCGAAAAATCGGCGGTCTGTTTTCATTCCTTCCTCAGCAGTTCCTGGACCATCTACTAGTACCCGTACCCAGACACCTCCCAATTCCGAAATTTCCAGCGACGATGAAGTATTGTCGAAAATGAGGAAGCAGAAGGAAAATCGGAATATTGAACGACCAAAAATGCAAAATGCTCCCGTTTTCAAACCGACCGCAGAGGAATTTAAGGATCCGATGATATATTTCGAGTCAATACTGCCAAAGGTGGCAGAGTTTGGGTTGTGCAAAGTGGTTCCACCGGAGACGTTCGTCCCACCTTGTAACTTGGATAACGAAATTCGATTTGGGGTCACAAATCAGTATATAGCGCGTATGTTCAAGCGCTGGGGTCCGGCCTCTAAAGAACTTTCCAATATTCGGGCCAATTTGATTGCGCACAAAATGTGCCCCAGACCACCATtgCTTGATGGCCTTGAGGTAAACTTACCAAAACTATTACGAGTTGTGCAAGGCTTGGGTGGATTGAAGAACGTATTCACTAAGAAGAAATGGAATAAGGTTGCTGAGGAGATGAGATACAAAAAACTGATAAAACCGGAAAAGCGCCTTGACCAAATATATGTGAAATTCCTGTTGCCATACGACACGTTGACCAATCAGGAGCGTAATAAGCTGGCTAATCAAGTTAATCGTTTATGGAAGAAGCGTTCCGATAATATGTTAGAGCGAGCTACGAACCCATTACATAGACAGAAACGCATGTTGGCGGAGTCTGATTCGTCCTCCGACGAAGAGTATGGGCCAGATGATGTGAAAATATTGGAGCCATTGAGTGAAACCGAAGACTGTATTATCGCGGGAAAGAATATGAATTTGAAGTTGTTTAAAAAGATCGCCAATAGCGCTGTGGATATAAACGTGCCCACGCGCGTTTGCAACGAGGAGAATGTCGAGAAGATATATTGGAAGCATGTCGAGACTGGCGAGGAGCACGTGTGCGTGTACGCCGCCTCCATAGACACGGACGAGGCTGACTTGGGCTTCCCGAACAATTGTGATCAACCGTACTCGCAACACCCGTGGAATCTGAAGAGACTGAGTGAAAATCCCCGCAACGTTCTAAGTTACCTAGGCCCAGTTGTGGGTATGACGGTGCCAACCCTGCACCTCTCTATGGTGTTCTCTACTAGTTGCTGGCATCGCGACCCACACGGCCTACCCTGGATTGAGTACATGCATGAGGGTGCGCAGAAAATATGGTATGGCATACCAGACGACCAAAGCAATAACTTCCGCAGCGCAGTGGAGATTCTTGGCCCTGCGTTCTGCCAAAACAAATCCATTTGGCTCCCCTCTGACATTACAATGATACCCCCGGAAATGTTACAGAAGTATAACGTATCAATGTGCCGTGCGGTACAAAAACCCCGCGAGTTCATCATAGTGTGCCCCAAGGCTTACTCTTGTTCGATTGCCACAAATTTTGGAGTGTCAGAAAGTGTGTACTTCGCTACAAACAGCTGGATTAAAAACTATGTTCATATATTTAAGgaGTTAACGAATAGTTGTGAACCAGCCATGTTCTCTATTGAAAAGTTGTTATTATCTTTTACACGCGATCAACGTACTCCTATGGATATTTTAAGGCAAATCTACCCGACATTGAATGaagtaataaaaaaagagcTTAAGAACCGTCGTTCGATTAAAAAACTTGGATTTAAGGGTAAAGATATTCCAGAGACACGAGTTCACACCGGTGCCTGGAATGTTCGCGATCAAGATGAGTGCGAACTTTGCAGGGTTACCTTATACCTGTCTAAGGTCAAGGGGATGTTCCAAAAAAAGACTGCGCTTTGTTTGGAACAcggattaaaaatattaaaaaaaaatataaaaccaaaATTCCCATTAGAGGTAGAACACATCGTGTCATCCGAGGTGCTGACAGGAATTTTAGAAAACCTACAATTGCGGCTGACTGAAGGAACAatgtaa
- Protein Sequence
- MTGKVPKSWKLANVQPVPKKGSRADPSNYRPISVTSILCKTMERVLNSRLMAHLEANDLLSDRQYGFRRNRSTGDLLAYATYIWSEAIENHGEALAVSLDISKAFDRVWHDSLIGKLPSYGLPTGFCAWISDFLRDRSIRVVVDDLQFENSDEAMMNVKTDKYERTDEDEKFSDNSVIIGDSNGQDAVTYTPAPNNYCAQNIDDASPSVQNQASTRSNTKKTRNESCPSRHITSLRDIVCCSNTVLNKRCNACKFCSKIKLVSTLVKSLESSSFNLLLSDHINVENLPTDLTDTTNPSTSVSSTGNLNNSNNTWNCKLEVPFPETLDDDCDETVQNGQLSGTQQQETRNPNASPSTDETSKNRRSVFIPSSAVPGPSTSTRTQTPPNSEISSDDEVLSKMRKQKENRNIERPKMQNAPVFKPTAEEFKDPMIYFESILPKVAEFGLCKVVPPETFVPPCNLDNEIRFGVTNQYIARMFKRWGPASKELSNIRANLIAHKMCPRPPLLDGLEVNLPKLLRVVQGLGGLKNVFTKKKWNKVAEEMRYKKLIKPEKRLDQIYVKFLLPYDTLTNQERNKLANQVNRLWKKRSDNMLERATNPLHRQKRMLAESDSSSDEEYGPDDVKILEPLSETEDCIIAGKNMNLKLFKKIANSAVDINVPTRVCNEENVEKIYWKHVETGEEHVCVYAASIDTDEADLGFPNNCDQPYSQHPWNLKRLSENPRNVLSYLGPVVGMTVPTLHLSMVFSTSCWHRDPHGLPWIEYMHEGAQKIWYGIPDDQSNNFRSAVEILGPAFCQNKSIWLPSDITMIPPEMLQKYNVSMCRAVQKPREFIIVCPKAYSCSIATNFGVSESVYFATNSWIKNYVHIFKELTNSCEPAMFSIEKLLLSFTRDQRTPMDILRQIYPTLNEVIKKELKNRRSIKKLGFKGKDIPETRVHTGAWNVRDQDECELCRVTLYLSKVKGMFQKKTALCLEHGLKILKKNIKPKFPLEVEHIVSSEVLTGILENLQLRLTEGTM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357204;
- 90% Identity
- -
- 80% Identity
- -