Cfla011436.1
Basic Information
- Insect
- Coleophora flavipennella
- Gene Symbol
- dmd-4
- Assembly
- GCA_947284805.1
- Location
- OX369284.1:2337252-2354867[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-24 3.9e-20 72.8 11.4 1 47 7 53 7 53 0.98 2 2 2.6 3.2e+04 -3.7 5.2 2 11 457 466 456 466 0.90
Sequence Information
- Coding Sequence
- ATGAACAGTGGCCGTGCTCGAGTGCCGAAATGCGCCCGGTGTCGGAATCACGGGCTGATATCCAGTCTACGCGGCCACAAGAAGGCGTGCATGTACCGCCACTGCCAGTGCCCCAAGTGCGGGCTCATCAAGGAGCGACAACGCATCATGGCTGCTCAGGTGGCTCTGAAGAGGCAGCAAGCCGCAGAAGACAAGATCGCCCTGCACTTGGCATCAGTTGAGAGCGGCACCCATCTGGAAGCGTTGCCGCCGGGAAGGATCTATGGGATGAGGGTGACCGGCCCGTCGCATAGTCCTGGCCCAGAGCCGGACTCGGCGCACGACGATCAGACGCCAATCCACATCGACAGCGAGACTAGTGACTCCCTCCCAGAGTGCTGCGCCTCGCCCGACTCTGCCGGCGTCTCCAGCGCAGCCCGACCACGAGTGCTGCGCCTCGCCCGACTCTGCCGGCGTCTCCAGCGCAGCCCGACCACGGTAACCACTACAATTTTGTTCCACCAGCCAATCCACAACGACAGCGAGACTAGTGACTCCCTCCCAGAGTGCTGCGCCTCGCCCGACTCTGCCGGCGTCTCCAGCGCAGCCCGACCACGAGTGCTGCGCCTCGCCCGACTCTGCCGGCGTCTCCAGCGCAGCCCGACCACGGTAACCACTACAATTTTGTTCCACCAGCCAATCCACATCGACAGCGAGACTAGTGACTCCCTCCCAGAGTGCTGCGCCTCGCCCGACTCTGCCGGCGTCTCCAGCGCAGCCCGACCACGAGTGCTGCGCCTCGCCCGACTCTGCCGGCTTCTCCAGCGCAGCCCGACCACGGTAACCACTATAATTTTGTTCCACCAGCCAATCCACATCGACAGCGAGACTAGTGACTCCCTCCCAGAGTGCTGCGCCTCGCCCGACTCTGCCGGCTTCTCCAGCGCAGCCCGACCACGTCAAAACGAAGATAGCGTGGAAGGAGAGGGTTCCGTCAGCACGGCTGGCCTGGAGATGCTTCGGAAGTTGTTCCCCGGCAAGAAGCGGTCGGTACTGGAGCTGGTGATGAGACGCTGCAACCACGACCTGCTGCGCGCTGTCGAGCACTTCAATGCTACCCATATTGCACAGCGCGACAAGCCCCTCCCAACAAGTCAAACCAGTACAAGCACCTTAGACGCATCGGTATCCAGTTCCCAAGAAACAGAAGCCAGGTGGTCTGCATTTAGACCCGTTGGTCCACGAGCACCGTTACTTCCAGCTTTGGTCATGGGTCGGGTCTGCGGCTCCGAGTGGTTGGTGCCCCTTCCAGCATTACCAGCGCTGTCAGGGCCCTTGCTGCTACCGCTGCAGCATCAGCACCCGCCACCAGGAATATGTAACCCGTGCTCGCCTGATTGCCGGCAGTGTAACCGCCACTGA
- Protein Sequence
- MNSGRARVPKCARCRNHGLISSLRGHKKACMYRHCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVESGTHLEALPPGRIYGMRVTGPSHSPGPEPDSAHDDQTPIHIDSETSDSLPECCASPDSAGVSSAARPRVLRLARLCRRLQRSPTTVTTTILFHQPIHNDSETSDSLPECCASPDSAGVSSAARPRVLRLARLCRRLQRSPTTVTTTILFHQPIHIDSETSDSLPECCASPDSAGVSSAARPRVLRLARLCRLLQRSPTTVTTIILFHQPIHIDSETSDSLPECCASPDSAGFSSAARPRQNEDSVEGEGSVSTAGLEMLRKLFPGKKRSVLELVMRRCNHDLLRAVEHFNATHIAQRDKPLPTSQTSTSTLDASVSSSQETEARWSAFRPVGPRAPLLPALVMGRVCGSEWLVPLPALPALSGPLLLPLQHQHPPPGICNPCSPDCRQCNRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -