Cdea008963.1
Basic Information
- Insect
- Coleophora deauratella
- Gene Symbol
- Hr39
- Assembly
- GCA_958295455.1
- Location
- OY282390.1:21581204-21602099[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.5 2.2e+04 -4.3 12.7 60 163 178 287 147 297 0.55 2 5 8.2e-08 0.0012 19.6 0.1 1 20 393 412 393 427 0.92 3 5 0.19 2.7e+03 -1.3 0.0 89 120 450 478 413 495 0.72 4 5 4.2e-57 6e-53 182.0 0.0 207 380 519 687 501 701 0.95 5 5 0.9 1.3e+04 -3.6 0.0 392 408 717 733 715 733 0.86
Sequence Information
- Coding Sequence
- atgtgtgttgcGTGCGCAGACGAGGCGAGCAACGGCTCGGTGGAGACgctgcgcggcgcgggcggcggccgcgagcgcgccgcgcgcccgcccgccgcgcaccccgcgcaccccgcgcaccccgcgcCACCGCAGGCGGCGTACgagccggcgccggcgcggccGCCGTCGCCCGCGCCGCTCGACGCGCTGCGCCCCATCAAGAAGGAGCTCTGGCCAGGGTTAAATTACTTCAATCTAGTCCTAGTTTCATCCCCGGAAAGGTACGCGAGCCAGTACACAGAAGACTGTTTGTTAACTGGTCACTGGGTACTGTTGCCGCGTGTCTCGGCGTCTCTTAACGTGCGGCTCGTGGTTGCAGAGGTGAAGTGCGAgccggcggcgggggcgggggcgggggcgggggtgACGGGGGGCGGGGGCTGGTCGCCGCTGGCCGCGCGGCTGGTGCGCGTGCAGTCGGCCGGCAGCGCGGACAGCGCCGTGCACTCGCTGTACCACAGCAGCCCCGCCGCCTCGCGCCGCGCCACGCCCTCGCTCTCGCGCAACAACAGCGACGCCTCGCACTCCTCCTGCTACTCCTACAGCACCGGTAGCGAGCTGTCGCACTCGCCGGCGCACTCGCCCACGCAGCACCGGCAGCGAGCTGTCGCACTCGCCCACGCAGGTGCgccacccacacacacacacacacacacgcactccTCCTGCTACTCCTACAGCACCGGCAGCGAGCTGTCGCACTCGCCGGCGCACTCGCCCACGCAGGTGcgctctcccccccccccccacacacacacgcactccTCCTGCTACTCCTACAGCACCGGCAGCGAGCTGTCGCACTCGCCCACACAGGCGCGgcacggcgcggcgccggcgggcCCCGGCGCGGCGGACGAGGAGGATGCGGACGAGCGGCTGCAGCAGCACCAGGGCATCAGCCGCCAGCAGCTCATCAACAGCCCGTGCCCGATCTGCGGCGACAAGATCAGCGGCTTCCACTACGGCATCTTCTCGTGCGAGTCGTGCAAGGGCTTCTTCAAGCGCACCGTGCAGAACCGCAAGAACTACATGTGCCTGCGCGGGGGCGCCTGCCCCGTGGCCGTGGCCACGCGCAAGAAGTGCCCCGCCTGCCGCTTCGACAAGTGCCTCGCGCGCGGCATGAAGCTGGAGGCCATCCGCGAGGACCGCACCCGCGGCGGCCGCTCCACGTACCAGTGCTCGTACTCGCTGTCCGGCGCCGCCTCCACCGGCTCGCTgctggcgccgccgcccgcgccgctgcgccACGCCGCCTCGCTCACGCACGTGAACGGGCCCGGCGCGTACGGCGGCCGCGGCGAGTGCAGCAGCAGTCCGCGAACGCCCGACATCCCGCCGTTATTGCAGGAAATAATGGACGTGGAGCACCTGTGGCAGTACAACGAGGCGGAGCTGGCGACGCGGACGCCCGGGGGGCCCGGGGGGGCCGGGGCTGGGGCtgcgggcgggggcggcgggggccaCAACCCCCTGCTGGCCGGGTGCGGCATCACGGCGGGTAGCGCGCCGCCGGACTTCCTGGCCGAGCTGTGCCACATCGCCGACCACCGCCTCTACAAGATCGTCAAGTGGTGCAAGAGCCTGCCGCTCTTCAAGAACATCTCGATCGACGACCAGATCTGCCTGCTCATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTACCGCGGCGTGGCCACGCCCGGCGAGGTGCGCCTGCGCAGCGCCGGCGCCTGCCTGCACAGCGCCCGGGCGGCGGCGGGGCTGCAGCCGTGGCTGGAGCGCATGCTGAGCTTCACGGAGCACCTGCGGCGGCTGCGCGTCGACCGCTACGAGTACGTCGCGCTCAAGGTCATCGTGCTGCTCACCTCGGACGCGCCGGAGCTGCGCGAGCCGGAGCGCGTGCGCGCCATGCAGGAGCGCGCGCTGGCGGCGCTGCAGCACTACACCGCGCGCCACtcgccgcgcgcgcccgccaAGTTCGGCGAGCTGCTGCTGCGCATCCCCGAGCTGCAGCGCACCTGCCAGTACTTCATGCAGGTGGGCAAGGAGATGTTGAGCCCGGCGAcggcgggcgcggggggcggggcgggcggcgggggcggcgagGGTGCAGCGGGCGACGCGCCCAGCTTCAACCTGCTCATGGAGCTGCTGCGCGGCGACCACTGA
- Protein Sequence
- MCVACADEASNGSVETLRGAGGGRERAARPPAAHPAHPAHPAPPQAAYEPAPARPPSPAPLDALRPIKKELWPGLNYFNLVLVSSPERYASQYTEDCLLTGHWVLLPRVSASLNVRLVVAEVKCEPAAGAGAGAGVTGGGGWSPLAARLVRVQSAGSADSAVHSLYHSSPAASRRATPSLSRNNSDASHSSCYSYSTGSELSHSPAHSPTQHRQRAVALAHAGAPPTHTHTHTHSSCYSYSTGSELSHSPAHSPTQVRSPPPPHTHTHSSCYSYSTGSELSHSPTQARHGAAPAGPGAADEEDADERLQQHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGACPVAVATRKKCPACRFDKCLARGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLAPPPAPLRHAASLTHVNGPGAYGGRGECSSSPRTPDIPPLLQEIMDVEHLWQYNEAELATRTPGGPGGAGAGAAGGGGGGHNPLLAGCGITAGSAPPDFLAELCHIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVATPGEVRLRSAGACLHSARAAAGLQPWLERMLSFTEHLRRLRVDRYEYVALKVIVLLTSDAPELREPERVRAMQERALAALQHYTARHSPRAPAKFGELLLRIPELQRTCQYFMQVGKEMLSPATAGAGGGAGGGGGEGAAGDAPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00355303;
- 90% Identity
- iTF_00355303;
- 80% Identity
- iTF_00355303;