Basic Information

Insect: Coenonympha glycerion
Gene Symbol: -
Assembly: GCA_963855885.1
Location: OY979645.1:5767916-5782100[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 3.7 2.3e+02 3.2 0.7 1 20 7 27 7 28 0.89

2 21 0.0004 0.025 15.7 0.0 2 21 35 54 34 55 0.94

3 21 0.19 11 7.3 0.3 1 12 213 224 213 233 0.86

4 21 4.6e-05 0.0028 18.6 0.3 1 23 346 368 346 368 0.98

5 21 0.00015 0.0094 17.0 3.0 1 23 383 405 383 405 0.98

6 21 0.00014 0.0084 17.1 1.9 3 23 460 480 458 480 0.96

7 21 0.0016 0.1 13.8 2.4 1 23 496 518 496 518 0.99

8 21 1.8e-06 0.00011 23.1 4.2 1 23 524 546 524 546 0.98

9 21 0.0055 0.34 12.1 6.2 1 23 552 574 552 574 0.97

10 21 1.7e-05 0.001 20.0 0.4 1 23 580 602 580 602 0.98

11 21 0.00066 0.04 15.0 0.1 1 23 606 628 606 628 0.98

12 21 0.001 0.064 14.4 0.1 1 23 636 659 636 659 0.96

13 21 0.19 11 7.3 0.0 6 23 674 691 672 691 0.97

14 21 0.001 0.064 14.4 0.1 1 23 699 722 699 722 0.96

15 21 0.19 11 7.3 0.0 6 23 737 754 735 754 0.97

16 21 0.001 0.064 14.4 0.1 1 23 762 785 762 785 0.96

17 21 0.19 11 7.3 0.0 6 23 800 817 798 817 0.97

18 21 0.001 0.064 14.4 0.1 1 23 825 848 825 848 0.96

19 21 0.19 11 7.3 0.0 6 23 863 880 861 880 0.97

20 21 0.001 0.064 14.4 0.1 1 23 888 911 888 911 0.96

21 21 0.19 11 7.3 0.0 6 23 926 943 924 943 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	3.7	2.3e+02	3.2	0.7	1	20	7	27	7	28	0.89
2	21	0.0004	0.025	15.7	0.0	2	21	35	54	34	55	0.94
3	21	0.19	11	7.3	0.3	1	12	213	224	213	233	0.86
4	21	4.6e-05	0.0028	18.6	0.3	1	23	346	368	346	368	0.98
5	21	0.00015	0.0094	17.0	3.0	1	23	383	405	383	405	0.98
6	21	0.00014	0.0084	17.1	1.9	3	23	460	480	458	480	0.96
7	21	0.0016	0.1	13.8	2.4	1	23	496	518	496	518	0.99
8	21	1.8e-06	0.00011	23.1	4.2	1	23	524	546	524	546	0.98
9	21	0.0055	0.34	12.1	6.2	1	23	552	574	552	574	0.97
10	21	1.7e-05	0.001	20.0	0.4	1	23	580	602	580	602	0.98
11	21	0.00066	0.04	15.0	0.1	1	23	606	628	606	628	0.98
12	21	0.001	0.064	14.4	0.1	1	23	636	659	636	659	0.96
13	21	0.19	11	7.3	0.0	6	23	674	691	672	691	0.97
14	21	0.001	0.064	14.4	0.1	1	23	699	722	699	722	0.96
15	21	0.19	11	7.3	0.0	6	23	737	754	735	754	0.97
16	21	0.001	0.064	14.4	0.1	1	23	762	785	762	785	0.96
17	21	0.19	11	7.3	0.0	6	23	800	817	798	817	0.97
18	21	0.001	0.064	14.4	0.1	1	23	825	848	825	848	0.96
19	21	0.19	11	7.3	0.0	6	23	863	880	861	880	0.97
20	21	0.001	0.064	14.4	0.1	1	23	888	911	888	911	0.96
21	21	0.19	11	7.3	0.0	6	23	926	943	924	943	0.97

Sequence Information

Coding Sequence: ATGGATCTTCCAGTGCTTTATAGCTGTCCACTTTGCTGTAGTAATACGTTTAACTCCAAACAATCGCTTGCGGAACATTTGGTCCAGATTTCACTGAATATTGTATGCACAATATGTAACCAAAGTTTTTCATCATTGGAACTACTCACTGAACACCTTAAAGTTGAAAATTGCGATTTACAAAGTACTGATGACAGTGAGATCATGGGAACTGACTTGCCTAACATTGTTAAAGTTGAACATGACATGAACTCTGATAGTACACAGGACAATGAccgtaaacaaaaaaatagtatAGAAAACAATgctgtaaacaaaataaaagtaacTACCATTGAGGATAACACAGGCAGCAAAATGTATGTAGAGCTGTTAAGCAAACAGTTAACAAAACCATGTCTGCAGAAGCAAGAGATGAAACTGGTCAGGGAAGATGGCCAGAGCAGATACGTCATCCTTGCAGATGATGGGTCAATGTTGAGCCAAGACTTCACTATAGTCACTAGACAAAATAATGATGGAACAATTTCTTTGACTACACTGAAAGaaACAGAAAGTCCTGAAAATGAAGATGGAAAATTGGCTCCTGATTCAGCAGTGCCTGAGGATGAAGCAGGTGATAAAGAGGAAGAACTCTACACTTGCAACACATGTGGGGTTTCATTCTCCTCCGTTCTCGAACACATTCAAAACTACCACACAGACGAAGATGTTGTTGTTCATgacacaAGCAGTGCTGATCAATTAGAATTTGAATCTACAGAGAACAACAAAACTGCAGTAGATAAACAGTCCTCAAGAAGAATGATAACTGAGGCTGGGAACATTATAGAAGCACCACCTCCTCTGTCAGTCACTACAAATCAGTTGAATCAGGAAACTCAGATAGataaaaatagcGTATACCACAAAGTAGTGATGAAGGATATGCAGACGTCGGGAGGTAATAAAATTAAGCTGTACAACTGCCTCACTTGCAACATCTATGTCACCTCGCTGGATGAGTTCAAACACCAGCCATGTAAAGTCTtGAAATACCAATGCCCGCAGTGTCCAGCAGCCTATGAAAATTCTAAATCCCTATGTGCACATATGAAAGCACATAAATTAAGGAACACAGAGTGTGCCCCCGTGTTGCCGCTAAAATTCGAATGTGAAATTTGCAATACACATTTCCCCACTAGTAAATCCCTTAAATTACACAAGAAAATGCACGAACCTGTCAAATCCCGTCCAATAGATCCTCCTTTAGAGACGCCGGAGGGAATGCCAGTGAGCACCGACAAGTATCTGTGcggtatttgcgaaaaactaatacCCATAGATTATAGAATAATACACCAAAACTCACACAAACCCAACAACAAAAATATGAACTGTGATATATGCAACAAGAAGTTCCATTCGAAAGAGTATCTGGAAATGCATATGAGTGTACATAAAACAGATAAGGCGCCAATTGAAAAGTCAGACAAATCGCTGCCATATAAATGTTTATATTGTGAAAGGAAGTTCGCACGGCCCCACGAGAAAGTTAAACATGAGAGGATACATACAGGCGAGAAGCCACACGAGTGCGAGATCTGCGGCAAGACGTTCCGTGTGTCGTACTGCCTCACGCTGCACATGCGCACGCACACCGGCGCGCGCCCCTACGCGTGCCCGCACTGCAACAAGAGGTTTAAAGCGCACAGCGTGTACAACCACCACCTGCTGACGCACTCGGAGGTGCGCGCCTACAAGTGCCCCTTCTGCCCCAAGGCGTTCAAGACCTCCGTGCAGCTGGCGGGGCACAAGAACTCGCACACCAAGCCCTTCTCGTGCCAGCTGTGTAACAGGCCGTTCGCGTCGCTGTACGCGGTGCGCGTGCACATGGAGATCCACACGCGGCAGAACAGCCTCAAGTTCGTGTGCTCGCTGTGCGGCGCCAGCTACGCACGCGCCTTCGCGCTCAAGGACCACGTCAAGCAGGTGCACAAGCAGGACATCGACACCGCGGAGAACATTGTGAGTACTGCTTGTGACAGGCCGTTCGCGTCGCTGTACGCAGTGCGTGTGCACATGGAGATCCACACGCGGCAGAACAGCCTCAAGTTCGTGTGCTCGCTGTGCGGCGCCAGCTACGCACGCGCCTTCGCGCTCAAGGACCACGTCAAGCAGGTGCACAAGCAGGACATCGACACCGCGGAGAACATTGTGAGTACTGCTTGTGACAGGCCGTTCGCGTCGCTGTACGCGGTGCGCGTGCACATGGAGATCCACACGCGGCAGAACAGCCTCAAGTTCGTGTGCTCGCTGTGCGGCGCCAGCTACGCGCGCGCCTTCGCGCTCAAGGACCACGTCAAGCAGGTGCACAAGCAGGACATCGACACCGCGGAGAACATTGTGAGTACTGCTTGTGACAGGCCGTTCGCGTCGCTGTACGCGGTGCGCGTGCACATGGAGATCCACACGCGGCAGAACAGCCTCAAGTTCGTGTGCTCGCTGTGCGGCGCCAGCTACGCACGCGCCTTCGCGCTCAAGGACCACGTCAAGCAGGTGCACAAGCAGGACATCGACACCGCGGAGAACATTGTGAGTACTGCTTGTGACAGGCCGTTCGCGTCGCTGTACGCGGTGCGCGTGCACATGGAGATCCACACGCGGCAGAACAGCCTCAAGTTCGTGTGCTCGCTGTGCGGCGCCAGCTACGCGCGCGCCTTCGCGCTCAAGGACCACGTCAAGCAGGTGCACAAGCAGGACATCGACACCGCGGAGAACATTGTGAGTACTGCTTGTGACAGGCCGTTCGCGTCGCTGTACGCGGTGCGCGTGCACATGGAGATCCACACGCGGCAGAACAGCCTCAAGTTCGTGTGCTCGCTGTGCGGCGCCAGCTACGGTATCCGTTTGGACCCTTGTCTGGCTCGTCAGGCTCGTCAGGCTCGTCGTACTGACCAGAGCGATCgtctgaagtgggaggggaaaatTATCGGCAAAGTTTATACGGCAGCAGCGAACGGGCTATATGCTGGCATTATCGAATTAATTTAG
Protein Sequence: MDLPVLYSCPLCCSNTFNSKQSLAEHLVQISLNIVCTICNQSFSSLELLTEHLKVENCDLQSTDDSEIMGTDLPNIVKVEHDMNSDSTQDNDRKQKNSIENNAVNKIKVTTIEDNTGSKMYVELLSKQLTKPCLQKQEMKLVREDGQSRYVILADDGSMLSQDFTIVTRQNNDGTISLTTLKETESPENEDGKLAPDSAVPEDEAGDKEEELYTCNTCGVSFSSVLEHIQNYHTDEDVVVHDTSSADQLEFESTENNKTAVDKQSSRRMITEAGNIIEAPPPLSVTTNQLNQETQIDKNSVYHKVVMKDMQTSGGNKIKLYNCLTCNIYVTSLDEFKHQPCKVLKYQCPQCPAAYENSKSLCAHMKAHKLRNTECAPVLPLKFECEICNTHFPTSKSLKLHKKMHEPVKSRPIDPPLETPEGMPVSTDKYLCGICEKLIPIDYRIIHQNSHKPNNKNMNCDICNKKFHSKEYLEMHMSVHKTDKAPIEKSDKSLPYKCLYCERKFARPHEKVKHERIHTGEKPHECEICGKTFRVSYCLTLHMRTHTGARPYACPHCNKRFKAHSVYNHHLLTHSEVRAYKCPFCPKAFKTSVQLAGHKNSHTKPFSCQLCNRPFASLYAVRVHMEIHTRQNSLKFVCSLCGASYARAFALKDHVKQVHKQDIDTAENIVSTACDRPFASLYAVRVHMEIHTRQNSLKFVCSLCGASYARAFALKDHVKQVHKQDIDTAENIVSTACDRPFASLYAVRVHMEIHTRQNSLKFVCSLCGASYARAFALKDHVKQVHKQDIDTAENIVSTACDRPFASLYAVRVHMEIHTRQNSLKFVCSLCGASYARAFALKDHVKQVHKQDIDTAENIVSTACDRPFASLYAVRVHMEIHTRQNSLKFVCSLCGASYARAFALKDHVKQVHKQDIDTAENIVSTACDRPFASLYAVRVHMEIHTRQNSLKFVCSLCGASYGIRLDPCLARQARQARRTDQSDRLKWEGKIIGKVYTAAANGLYAGIIELI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00353340;
90% Identity: iTF_00353340;
80% Identity: -