Cgly024094.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Coenonympha glycerion
Gene Symbol
-
Assembly
GCA_963855885.1
Location
OY979654.1:341213-344305[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 7.6e-06 0.00046 21.1 0.8 1 23 133 155 133 155 0.98
2 31 4e-07 2.4e-05 25.1 1.5 3 23 162 182 160 182 0.97
3 31 0.3 19 6.6 0.5 3 23 189 209 188 209 0.97
4 31 0.00027 0.017 16.2 3.1 1 23 215 237 215 237 0.98
5 31 2.9e-06 0.00018 22.4 3.7 1 23 243 265 243 265 0.98
6 31 0.019 1.1 10.4 7.1 1 23 271 293 271 293 0.98
7 31 0.0026 0.16 13.1 0.8 1 23 299 322 299 322 0.93
8 31 0.0036 0.22 12.7 3.1 1 23 328 350 328 350 0.98
9 31 0.0024 0.15 13.2 0.8 1 23 356 378 356 378 0.96
10 31 0.0016 0.1 13.8 1.8 1 23 384 406 384 406 0.98
11 31 3.5e-05 0.0021 19.0 5.0 1 23 412 434 412 434 0.98
12 31 2.2e-05 0.0013 19.7 1.6 1 23 440 462 440 462 0.99
13 31 0.0012 0.071 14.2 0.6 1 23 468 490 468 490 0.97
14 31 0.00047 0.029 15.5 3.9 1 23 496 518 496 518 0.98
15 31 0.067 4.1 8.7 7.7 1 23 524 546 524 546 0.98
16 31 0.06 3.7 8.8 1.0 3 23 554 574 552 574 0.96
17 31 0.22 13 7.1 0.1 1 23 580 602 580 602 0.96
18 31 0.00023 0.014 16.4 8.9 1 23 608 630 608 630 0.98
19 31 1.4e-06 8.6e-05 23.4 1.1 1 23 636 658 636 658 0.99
20 31 0.00069 0.042 14.9 2.5 1 23 664 686 664 686 0.97
21 31 7.9e-06 0.00048 21.0 0.4 1 23 692 714 692 714 0.98
22 31 0.00045 0.028 15.5 7.3 1 23 720 742 720 742 0.98
23 31 0.0001 0.0062 17.6 1.3 1 23 748 770 748 770 0.97
24 31 0.002 0.12 13.5 1.3 1 23 804 826 804 826 0.98
25 31 0.017 1 10.5 1.0 2 23 832 853 831 853 0.96
26 31 0.029 1.8 9.8 3.0 1 23 859 881 859 881 0.96
27 31 0.00035 0.021 15.9 3.7 1 23 887 909 887 909 0.99
28 31 9.6e-06 0.00059 20.8 1.6 1 23 915 937 915 937 0.99
29 31 0.0005 0.03 15.4 5.1 1 23 943 965 943 965 0.98
30 31 7e-06 0.00043 21.2 1.3 1 23 971 994 971 994 0.98
31 31 0.14 8.3 7.7 7.2 1 23 1002 1025 1002 1025 0.97

Sequence Information

Coding Sequence
ATGTCTGCTTCTTATCAGAAACCACCAGACTCAACAAGACGGGCAGAACTGTACGTCTTACTACACAGAATGGATTTCAAAACTGAAACAGAAAACAAGTCTACGCCATTCATAGACAATGGGACATACAAAGAAGAGAATACACTCAGAGATGAGGTAGAAACCTGTGAGAATGTTTATGATGCTTACTTTGATGTAGATCATGAAAGTTTCAATGGCAGCTCACAACAGAAACATTTGAGCGACAAGCGAGTCAAAACAACATCTCAAATAGGAGATAAAGAAAACCTAAACTATGAGTCAAACAAAGCAATACATCGTGATACAATTGACAATGAAGGCATCCAAGAACCAAGTAAAATTGAGCAAGTTGACAACGTGAACGAAGATGCTGTATATATGTGTGAAATTTGTAATATCACATTTGAAAGAAAGAATTATTTAGCCTATCACATGCGGAGCCATGGGCTCGGGTCGCTGGCGTGCCACATCTGTGGATATACATTCACTGATAAAACAAATCTGGAGTCGCACTTGAAGACTCATCCCTTGAAGACAGTGGCATGTGAGcagtgtgactataaatgtgacTATGTGGGTATTCTGCGCATACACATGCGGATGCACACTGGCGAGAAGCCCTATTCCTGTGCACACTGCACCTACACCTGTGCAGTCAAGAGCTCTTTGATTTCCCACATGAGGATCCACACGGGAGACAGACCGTACAAATGTCACTTGTGTAATCAAGACTATAAAGACAAAAGTAATTTGATCCGTCACATGAAACTCCACACAGGTGAGAAGAAGTACTCCTGTCACCACTGTACATACACGAGTTATACTAAGAGCGGGATGAGACTACACTTGAGACGTCACTCTGATGACAGACCGTTCTCGTGCAGCATGTGCCAGTGGAGATACAAGAGTAGGGGCACTTTGGTGAAACATGCGCTGAACACTCATATTTTTGGTAGAACTTACCATTGCAAATATTGCCGGGCGACATTCATTGACAATATTACCTTTAAACAACATATCATAAAACACTCCGGTGAGAAACCCTATAAATGTGATGTCTGCTACAGAGGATTCAGATTGAAATACCAATTAGCCGATCACAGGACAGCACATAGCGGTGAGAAAGCTTACTCGTGCAAACTGTGTGACTACAAATGTGAGCAGAGAGTCAATTTAGTTAATCACGCAAAGGTTCACGTAGATGAGAAGCCTTTCTACTGCAATCTCTGTCACACGAGCTTCAAAAGGAAAGGAAGTTTGAAGTACCACATGCTATCGCACACGGGAGAGAAGCAGTACGTCTGCGACGTCTGCCAATACGAATGCTCCCAGAAATACGCCCTAGTCactcacatgaggactcacaccggcGAAAAACCGTACGCGTGTCGGTATTGCCCGCGCAGATTTAAAACGTCCAACGCGCTAGCTCCCCACTTGAAGCGGCACACCGGTGAGAAGAATTTCTCCTGCCAGTATTGCCCGTACAGATGTGTTCTTAAGAGCACTCTGACTCAGCACCTCCGGACCCACACGGGTGAGACACCATTCTCGTGCGAGCACTGCGACTTCAAATGCAAGACCAAGGGTTACATGTTGTATCATACGCGCACCCACACCGGGGAAAAGCCTCTAGCTTGCGACCTGTGTAACTACCGGTGCTCCAGGCCGGGCATTCTCAAGACTCATTTGCTGCGGCACGCTGGTGTCAAACGCTATGCGTGCGACCTCTGCCCGTTCAGGGACGTGACGAGCAACGGGCTGGCGCGCCACGTGAGAACACACACCGGCGAGAAACCTCACACGTGCAAGTACTGCCATTACAGCTGCAACGACAGCAGCTATCTCACCACGCACATGAGGATCCACACGGGCGAAAAACCATATCCTTGCGACACGTGCCACCTGAAGTTCTCCAATCCGGGCGGCTTACGCAACCACATGCGAACCCACACCAGAGAGAAATCGCACTCTTGCGACGTCTGTCAGATGAAATTCCGGGAACGCGAAACTCTGAAGACTCACATGATGCTGCACACCGGAGAAAAACCTTATAACTGTCCGCTTTGCGACTTCGCGTCTAGACAGAAAAGTGGCCTAACGGTCCATATGAGGACTCATACGGGAGAGAAACCTTTCTCGTGCGAGCACTGCGATCATAAATGCGTCACTTCCACGGCGTTGAAGTCGCATATGAGGACACACACCGAGGAGCGGCCGCACTCCTGCGAGATTTGTTCCTCCTCGTTCAGAACTAAAGGAGCTTTACGAATCCATACGAGAGTGCACACCGGCGAAAAACCTTACTCGTGCGAGCTCTGCGGCTTTAGGAGCGCGCAGAAAATCAGCGTAAGACACATGAATACGCACACGCGTGAGAAAACGCAGTACTCGTGTCCGCACTGTGAATTCAAAAGCGCGACGAAGACAGTCTTGAACGCGCATCTACGGAGTCACCCTGAAGAGACGCTGCGTTGCGCCGTTTGTCCGTTTACTACGATGCATCCTACGAGTTTAAAAACTCATATCCTAAAGCATACAGGAGTGAAGCTGCACTGTTGCAGCTTGTGCCCGTACAGAGGCGCATTGAAATACGACTTAACCCAGCATATGATGACGCATACCAACGAGCGGCCCTTTAAGTGCCACCATTGCAGCTACGCGGCTCGGGACAAGTACTCTCTGGTCCTCCACATGCGGGTTCACACAGGTGAAAGGCCATATCGTTGCGAAGAGTGTCACATGAGATTTGCTATCCTAAACAACTTGAAGGCTCACATGCGGACCCACACGGGAGACAAGCGATACGCTTGCAAACATTGCCACAGGAAGTTCGCGGTTCGCAGTACTCTAACATCACACGAGCAGACCCACAACCGCAAGAAACGGTTTTCCTGCGAGCTTTGTGGAAAGAAGTTCAAAGTTCTCAAAACGCTAAAAAGTCACTTGAGAACAGCCCACGGTAATGTGAAACCGAGAAGCTATTCTTGCGACGCTTGTGGATATAAATGTACTTCAAAACACTGCTTAAGACTGCACATTGAGAAGAAACATGGTCGAACGCGAAAGTAG
Protein Sequence
MSASYQKPPDSTRRAELYVLLHRMDFKTETENKSTPFIDNGTYKEENTLRDEVETCENVYDAYFDVDHESFNGSSQQKHLSDKRVKTTSQIGDKENLNYESNKAIHRDTIDNEGIQEPSKIEQVDNVNEDAVYMCEICNITFERKNYLAYHMRSHGLGSLACHICGYTFTDKTNLESHLKTHPLKTVACEQCDYKCDYVGILRIHMRMHTGEKPYSCAHCTYTCAVKSSLISHMRIHTGDRPYKCHLCNQDYKDKSNLIRHMKLHTGEKKYSCHHCTYTSYTKSGMRLHLRRHSDDRPFSCSMCQWRYKSRGTLVKHALNTHIFGRTYHCKYCRATFIDNITFKQHIIKHSGEKPYKCDVCYRGFRLKYQLADHRTAHSGEKAYSCKLCDYKCEQRVNLVNHAKVHVDEKPFYCNLCHTSFKRKGSLKYHMLSHTGEKQYVCDVCQYECSQKYALVTHMRTHTGEKPYACRYCPRRFKTSNALAPHLKRHTGEKNFSCQYCPYRCVLKSTLTQHLRTHTGETPFSCEHCDFKCKTKGYMLYHTRTHTGEKPLACDLCNYRCSRPGILKTHLLRHAGVKRYACDLCPFRDVTSNGLARHVRTHTGEKPHTCKYCHYSCNDSSYLTTHMRIHTGEKPYPCDTCHLKFSNPGGLRNHMRTHTREKSHSCDVCQMKFRERETLKTHMMLHTGEKPYNCPLCDFASRQKSGLTVHMRTHTGEKPFSCEHCDHKCVTSTALKSHMRTHTEERPHSCEICSSSFRTKGALRIHTRVHTGEKPYSCELCGFRSAQKISVRHMNTHTREKTQYSCPHCEFKSATKTVLNAHLRSHPEETLRCAVCPFTTMHPTSLKTHILKHTGVKLHCCSLCPYRGALKYDLTQHMMTHTNERPFKCHHCSYAARDKYSLVLHMRVHTGERPYRCEECHMRFAILNNLKAHMRTHTGDKRYACKHCHRKFAVRSTLTSHEQTHNRKKRFSCELCGKKFKVLKTLKSHLRTAHGNVKPRSYSCDACGYKCTSKHCLRLHIEKKHGRTRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353331;
90% Identity
-
80% Identity
-