Basic Information

Insect: Coenonympha arcania
Gene Symbol: -
Assembly: GCA_036785405.1
Location: CM072081.1:8868909-8871950[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 1.4e-05 0.001 20.2 0.8 1 23 118 140 118 140 0.98

2 31 7.5e-05 0.0056 17.9 2.8 3 23 147 167 145 167 0.97

3 31 0.13 9.4 7.8 1.9 3 23 174 194 173 194 0.98

4 31 0.007 0.52 11.7 2.2 1 23 200 222 200 222 0.98

5 31 0.00085 0.063 14.6 8.6 1 23 228 250 228 250 0.99

6 31 0.0086 0.64 11.4 7.2 1 23 256 278 256 278 0.98

7 31 0.0011 0.085 14.2 0.5 1 23 284 307 284 307 0.91

8 31 0.029 2.1 9.8 1.6 1 23 313 335 313 335 0.98

9 31 0.00098 0.072 14.4 0.7 1 23 341 363 341 363 0.98

10 31 0.0084 0.62 11.5 0.7 1 23 369 391 369 391 0.98

11 31 0.00023 0.017 16.4 4.9 1 23 397 419 397 419 0.98

12 31 6.6e-05 0.0049 18.1 3.3 1 23 425 447 425 447 0.98

13 31 0.00012 0.0085 17.3 1.0 1 23 453 475 453 475 0.98

14 31 0.00048 0.035 15.4 3.3 1 23 481 503 481 503 0.98

15 31 0.34 25 6.4 4.9 1 23 509 531 509 531 0.98

16 31 0.0081 0.6 11.5 0.7 1 23 537 559 537 559 0.97

17 31 0.033 2.4 9.6 0.5 1 23 565 587 565 587 0.97

18 31 1.7e-05 0.0012 20.0 2.4 1 23 593 615 593 615 0.98

19 31 8.4e-05 0.0062 17.8 0.1 1 23 621 643 621 643 0.97

20 31 7.7e-05 0.0057 17.9 2.5 1 23 649 671 649 671 0.97

21 31 0.0003 0.022 16.0 2.1 1 23 677 699 677 699 0.97

22 31 0.0011 0.085 14.2 9.4 1 23 705 727 705 727 0.98

23 31 1.1e-05 0.00079 20.6 1.4 1 23 733 755 733 755 0.98

24 31 0.0012 0.089 14.1 0.8 1 23 789 811 789 811 0.98

25 31 0.0023 0.17 13.2 0.7 2 23 817 838 816 838 0.97

26 31 0.035 2.6 9.5 3.3 1 23 844 866 844 866 0.96

27 31 0.00033 0.025 15.9 1.9 1 23 872 894 872 894 0.99

28 31 5.1e-05 0.0038 18.4 0.3 1 23 900 922 900 922 0.99

29 31 8.3e-05 0.0062 17.8 1.3 1 23 928 950 928 950 0.98

30 31 8.1e-06 0.0006 20.9 1.2 1 23 956 979 956 979 0.98

31 31 0.15 11 7.5 7.4 1 23 987 1010 987 1010 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	1.4e-05	0.001	20.2	0.8	1	23	118	140	118	140	0.98
2	31	7.5e-05	0.0056	17.9	2.8	3	23	147	167	145	167	0.97
3	31	0.13	9.4	7.8	1.9	3	23	174	194	173	194	0.98
4	31	0.007	0.52	11.7	2.2	1	23	200	222	200	222	0.98
5	31	0.00085	0.063	14.6	8.6	1	23	228	250	228	250	0.99
6	31	0.0086	0.64	11.4	7.2	1	23	256	278	256	278	0.98
7	31	0.0011	0.085	14.2	0.5	1	23	284	307	284	307	0.91
8	31	0.029	2.1	9.8	1.6	1	23	313	335	313	335	0.98
9	31	0.00098	0.072	14.4	0.7	1	23	341	363	341	363	0.98
10	31	0.0084	0.62	11.5	0.7	1	23	369	391	369	391	0.98
11	31	0.00023	0.017	16.4	4.9	1	23	397	419	397	419	0.98
12	31	6.6e-05	0.0049	18.1	3.3	1	23	425	447	425	447	0.98
13	31	0.00012	0.0085	17.3	1.0	1	23	453	475	453	475	0.98
14	31	0.00048	0.035	15.4	3.3	1	23	481	503	481	503	0.98
15	31	0.34	25	6.4	4.9	1	23	509	531	509	531	0.98
16	31	0.0081	0.6	11.5	0.7	1	23	537	559	537	559	0.97
17	31	0.033	2.4	9.6	0.5	1	23	565	587	565	587	0.97
18	31	1.7e-05	0.0012	20.0	2.4	1	23	593	615	593	615	0.98
19	31	8.4e-05	0.0062	17.8	0.1	1	23	621	643	621	643	0.97
20	31	7.7e-05	0.0057	17.9	2.5	1	23	649	671	649	671	0.97
21	31	0.0003	0.022	16.0	2.1	1	23	677	699	677	699	0.97
22	31	0.0011	0.085	14.2	9.4	1	23	705	727	705	727	0.98
23	31	1.1e-05	0.00079	20.6	1.4	1	23	733	755	733	755	0.98
24	31	0.0012	0.089	14.1	0.8	1	23	789	811	789	811	0.98
25	31	0.0023	0.17	13.2	0.7	2	23	817	838	816	838	0.97
26	31	0.035	2.6	9.5	3.3	1	23	844	866	844	866	0.96
27	31	0.00033	0.025	15.9	1.9	1	23	872	894	872	894	0.99
28	31	5.1e-05	0.0038	18.4	0.3	1	23	900	922	900	922	0.99
29	31	8.3e-05	0.0062	17.8	1.3	1	23	928	950	928	950	0.98
30	31	8.1e-06	0.0006	20.9	1.2	1	23	956	979	956	979	0.98
31	31	0.15	11	7.5	7.4	1	23	987	1010	987	1010	0.95

Sequence Information

Coding Sequence: ATGGACGTCTTCAAAGATAGGATGGATTTCAAAACGGAAACAGAAGACAAGTCTTTGCCATTTATAGACACTGGCACATTGTACAAACGGAAGAATACACTCGGTGATGAGATGGAGACCTCCACAAATGTTTACGATGCTTACTTTGATGTCGATCATGAAAGTTCCAGTGGTACTTCACAACGGGAAGATTTGAGCGACAAGCAAGTCAAAACAACATCTCACAGAGGAGATAAAGAAAAACTAAACTATGAGTCAAACAATGCAAAACTTTGTGACACAACTGACAATAAAGGCATCCAAGAACCAAGTAACATTGAACAAGGTAACAACATGAACAAAGAAGCGGTGTATATTTGTGAAATTTGCAAAATCACATTCGATAGAAAGAATTATTTAGCCTATCACATGCGGAGCCACGGGTTCGGGTCTCTGGCGTGCCACATCTGTAGATATACATTCACAGATAAAAAGAAACTCGAGTTGCATTTGAAGACTCATCCCATGAAGACTGTGGCGTGCGAGCactgtgactataaatgtgaCTATGTAGGCATTTTGCGCATACACATGCGGACCCACACCCGTGAGAAGCCGTATTCCTGTGCACATTGCACCTACACCTGTGCAGTCAAGAGCTCTTTGATTCCTCACATGAGGATCCACACTGGAGACAGACCATACAAATGTCACTTGTGCAATCacaactataaagacaaatgtAATTTGATCCAACACATGAGACTCCACACGGGCGAGAAGAAGTACTCCTGTCACCACTGTACGTACATGAGTTACACTAAGAGCGCGATGAAAAACCATTTGAGACGTCACTCTGATGACAGGCCGTTCTTGTGCAGCATATGCCAGTGGCAGTTCAAGAATAAGGGCACTTTGGTAAAACATGCTCTGAACACTCATATTCTTGGTAGAACTTACCGTTGCAAGTATTGCCGGGCCACATTCATCGACAAGATCACCTCTAAACAACATCTGATAACACACTCTGGTGAGAAACCCTACCAATGTGACCTCTGCTACAGAGGGTTCGAGTTGAAATACCAATTAGAGGATCACAGGAGAGCTCACCGGGGCGAGAAAACTTACTCGTGCAACCTGTGTGACTACAAATGTGAACAGAGAGCCAGTTTAGCTGGTCACGCCAAGGTTCATGTGGACGAGAGGCCTTTCTACTGCAACCTGTGCCACTCGAGCTTCAAGAGGAAAGGAAGTTTGAAGTACCACATGTTGTCTCACACGGGAGAGCGGCAGTTCGTCTGTGACATCTGCCAATACGAGTGCTCCAAGAAATACTCGCTCCTCactcacatgaggactcacaccgGCGAGCAACCGTACACATGTCCGTATTGCCAGCGCAAATTCAAAACGTCCAACGCGCTGGCTCCTCACTTGAAACGGCACACCGGTGAGAAGAATTTCTCCTGTCAGTATTGTCCGTACAGATGTGTTTTGAAGAGCAGTCTGACGCTGCATCTCCGGACCCACACTCGTGAGACTCCGTTCTCGTGCGATCGCTGCGACTTCAAGTGCAAGAGCAAGGGTTACATGCTGTATCATGCGAGGAAACATACCGGGGAAAAGCCTTTCGCCTGCGACTTGTGCGACTATCGCTGCGCGAGGCCGGGCATCCTCAAGACTCACATGCTGCGGCACGCCGGGGTCAAGCGCTACGCGTGCCATCTGTGCCCGTTCAGGGACGTGACCAGCAACGGGCTGGCGCGGCACAtcaggacgcacactggtgtgAAGCCCTTCGCGTGCAAGTACTGCAGCTACCGCAGCTCCGACAGCAGCTACCTGACCACGCACATGAGGACCCACACTGGGGAGAAGCCCTACGCCTGCGACGCGTGCCCCCTGAAGTTCGCCAATCTGGGCACTCTACGCACCCACATGCGAACGCACACCGGAGAAAAACCACATTCTTGCGACGTTTGTCAGAAGAAATTCCGGGAGAGCGGGACTCTTAAAACTCATATGATGCTGCATATGGGTGAAAGACCACACAACTGTCCGCTTTGTGCCTTCACTAGTACACAAAAAAGTGGTCTAACAACCCATATGAGGACTCACGCGGGAGAGAAACCTTTCTCGTGCGAGCACTGCGGTCATAAATGCGCCACTTCCACGCACTTGAAGGCGCACACGAGGACGCACACCGAGGAGCGGCCGCACCGCTGCGAGACTTGCGGCAATTCGTTCAGAACTAAAGGGGCTTTACAAGTGCATACGAGAGTGCACACCGGCGAAAAGCCTTACTCGTGCGAGCTCTGCGACTTTAAGAGCGCGCAGAAAATCAGCGTCAGACACATGAACACACACACTCGTCAGAAAATACAGTATTCCTGTCCACACTGCGAATTTAAAAGTGCGACGAAGGGGGTTTTGAACGCGCATCTACGGAGTCACCCCGAAGAGACGCTGCGTTGTGCGGTGTGTCCGTTTACTACGATGCATGCTAGCAGTCTAAAAAATCATATACTGACGCATACAGGAGTAAAACTACACTGCTGCAGCTTGTGTCCGTACAGAGGCGCACTGAAACAAGACTTGACCAAGCATATGATGACGCACACAGACGAACGACCCTTTAAGTGCGATCACTGCAGTTACGCGGCTCGGAGCAAGTATACTCTGGTCCTACACATGAGGGTTCACACAGGCGAAAGGCCATATCGTTGCGAGGTGTGTCGCGTGAGATTCTCTGCCGTGAACAACTTGAACGCTCACATGCGGACCCACACCGGAGAAAAGCGGTACGCTTGCAAACAGTGCGACAAGAAGTTCGCGATTCGTAGCACCCTCAAGTCCCACGAGCAGACCCACAGCCGAAGGAGACGGTTCTCCTGCGAGCTTTGCGGGAAGAAGTTCAAAGTCTTCAAGACGCTGAAGGCTCACTTAAGAACGGCCCACGGTAATGCGACGACGAGAAGTTATTCGTGCGACGCTTGTGGGTATAAATGTACTTCAAAACACTGCTTAAGACTGCACATGGGGAAGAAACATGGCTGGAAGTAA
Protein Sequence: MDVFKDRMDFKTETEDKSLPFIDTGTLYKRKNTLGDEMETSTNVYDAYFDVDHESSSGTSQREDLSDKQVKTTSHRGDKEKLNYESNNAKLCDTTDNKGIQEPSNIEQGNNMNKEAVYICEICKITFDRKNYLAYHMRSHGFGSLACHICRYTFTDKKKLELHLKTHPMKTVACEHCDYKCDYVGILRIHMRTHTREKPYSCAHCTYTCAVKSSLIPHMRIHTGDRPYKCHLCNHNYKDKCNLIQHMRLHTGEKKYSCHHCTYMSYTKSAMKNHLRRHSDDRPFLCSICQWQFKNKGTLVKHALNTHILGRTYRCKYCRATFIDKITSKQHLITHSGEKPYQCDLCYRGFELKYQLEDHRRAHRGEKTYSCNLCDYKCEQRASLAGHAKVHVDERPFYCNLCHSSFKRKGSLKYHMLSHTGERQFVCDICQYECSKKYSLLTHMRTHTGEQPYTCPYCQRKFKTSNALAPHLKRHTGEKNFSCQYCPYRCVLKSSLTLHLRTHTRETPFSCDRCDFKCKSKGYMLYHARKHTGEKPFACDLCDYRCARPGILKTHMLRHAGVKRYACHLCPFRDVTSNGLARHIRTHTGVKPFACKYCSYRSSDSSYLTTHMRTHTGEKPYACDACPLKFANLGTLRTHMRTHTGEKPHSCDVCQKKFRESGTLKTHMMLHMGERPHNCPLCAFTSTQKSGLTTHMRTHAGEKPFSCEHCGHKCATSTHLKAHTRTHTEERPHRCETCGNSFRTKGALQVHTRVHTGEKPYSCELCDFKSAQKISVRHMNTHTRQKIQYSCPHCEFKSATKGVLNAHLRSHPEETLRCAVCPFTTMHASSLKNHILTHTGVKLHCCSLCPYRGALKQDLTKHMMTHTDERPFKCDHCSYAARSKYTLVLHMRVHTGERPYRCEVCRVRFSAVNNLNAHMRTHTGEKRYACKQCDKKFAIRSTLKSHEQTHSRRRRFSCELCGKKFKVFKTLKAHLRTAHGNATTRSYSCDACGYKCTSKHCLRLHMGKKHGWK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00354346;
90% Identity: -
80% Identity: -