Carc025354.1
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- -
- Assembly
- GCA_036785405.1
- Location
- CM072081.1:3001363-3017265[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 1 3.4e+03 -1.4 0.1 23 31 15 23 11 28 0.80 2 22 0.28 9.3e+02 0.4 2.2 17 31 35 49 15 54 0.75 3 22 1.3 4.3e+03 -1.7 0.1 21 27 99 105 92 111 0.74 4 22 0.0074 24 5.5 0.1 20 34 157 171 149 173 0.83 5 22 0.0052 17 5.9 0.1 20 34 194 208 187 210 0.75 6 22 0.0052 17 5.9 0.1 20 34 231 245 224 247 0.75 7 22 0.0052 17 5.9 0.1 20 34 268 282 261 284 0.75 8 22 0.0052 17 5.9 0.1 20 34 305 319 298 321 0.75 9 22 0.0052 17 5.9 0.1 20 34 342 356 335 358 0.75 10 22 0.0052 17 5.9 0.1 20 34 379 393 372 395 0.75 11 22 0.0052 17 5.9 0.1 20 34 416 430 409 432 0.75 12 22 0.0052 17 5.9 0.1 20 34 453 467 446 469 0.75 13 22 0.0052 17 5.9 0.1 20 34 490 504 483 506 0.75 14 22 0.0052 17 5.9 0.1 20 34 527 541 520 543 0.75 15 22 0.0052 17 5.9 0.1 20 34 564 578 557 580 0.75 16 22 0.0052 17 5.9 0.1 20 34 601 615 594 617 0.75 17 22 0.0052 17 5.9 0.1 20 34 638 652 631 654 0.75 18 22 0.0052 17 5.9 0.1 20 34 675 689 668 691 0.75 19 22 0.0052 17 5.9 0.1 20 34 712 726 705 728 0.75 20 22 0.0052 17 5.9 0.1 20 34 749 763 742 765 0.75 21 22 4.4 1.5e+04 -3.4 0.3 1 7 811 817 811 822 0.68 22 22 2.5 8.2e+03 -2.6 0.1 22 32 841 851 833 854 0.72
Sequence Information
- Coding Sequence
- ATGGTGGAACGTCGCTGCATCGCTGCATTAAACGGTGAACAATGCACGACCTGCACGCTGCGCTTCGCGAGCCCTGCCTCGCTGCGACTGCACGTGGCGAGTCACACGCAGCGGTATCTGTGTCGCAAGTGCGGAGAGACCCTCAAGCCGCGCGCCAAGCGCCGCCACCCCTGCCTCGAGCCGGCGCCGCCGCAGAGCGCCGCGTGCCATCTGTGCGGGAACTTGCTCAAGGACGCGAACGgtctgcagcagcacctgcggcgcgtgcacgcgagccgcagcagcgggcggcgctacgcgtgcaacgtgtgcggcgacagctacgagcggcaggaggcgctgcgcacgcacatgatAAAGCACATAACCCGCAAGTTCCACTGCGACCAGTGCCCCGCCACCTACAGCAGCCCCTACACGCTCACGCAGCACAAGCGTACCCGCCACGccgagcacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACccgccacgccgcgcacgccgcgcacgtctgccacgcgtgcggcgcgcgctacGCGACCAGGAAGAGCCTGCTGGCGCACGTGCGCGACACCAGCGACCACGCCGCCACCACATACGAGTGCCCCATCTGCAGTCGGGTTTGCCCCAACGAGAGGTCGCTCGCCTCGCACATCCAGTGCGTGCACTCGGCGCGCAAGGACTACGCGTGCTCGCAGTGCCCCGCGCGCTACACCAACAGGAAGTCGCTCGTGCGGCACGTCGCGTCGCACACGCGTTTAAAACCCCACAGGGTTGTCATCTGTCACCTGTGCGGGAATAGCTTTAAGGACAACAGCAAACTGAACAGGCATCTTCGAGAAGCGTGCAAAAAGACAAGAGAAGAAAATCTAGTAGCTATGTATGACTAG
- Protein Sequence
- MVERRCIAALNGEQCTTCTLRFASPASLRLHVASHTQRYLCRKCGETLKPRAKRRHPCLEPAPPQSAACHLCGNLLKDANGLQQHLRRVHASRSSGRRYACNVCGDSYERQEALRTHMIKHITRKFHCDQCPATYSSPYTLTQHKRTRHAEHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTRHAAHAAHVCHACGARYATRKSLLAHVRDTSDHAATTYECPICSRVCPNERSLASHIQCVHSARKDYACSQCPARYTNRKSLVRHVASHTRLKPHRVVICHLCGNSFKDNSKLNRHLREACKKTREENLVAMYD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00353342;
- 90% Identity
- iTF_00353342;
- 80% Identity
- iTF_00353342;