Carc002411.2
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- Exd2
- Assembly
- GCA_036785405.1
- Location
- CM072057.1:2970323-2978915[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.00071 0.28 12.2 0.1 52 100 429 476 381 486 0.82 2 5 0.00098 0.39 11.8 0.0 53 100 498 544 483 554 0.86 3 5 0.001 0.4 11.7 0.0 53 100 566 612 552 622 0.86 4 5 0.00098 0.39 11.8 0.0 53 100 634 680 619 690 0.86 5 5 0.0011 0.43 11.6 0.0 53 100 702 748 687 755 0.86
Sequence Information
- Coding Sequence
- ATGAAGATGTCCAAGTTGAAACTTGGCTTAACCTCTGCCATAGCGTTGGGATGTGCCGGAGCTGGTTTAACGTATTTGGTACTGCAGAGGTTGAAAGAAAAGAATGCTGCAGACGTATTGAATGACTTGACAATTGATATAATTACATCAGAAGAGGATTGTGATCAAGCCATCACTAAATTAAGGAgGAAGTGCGATCACAGCGCTGTTGGGTTTGACTGTGAGTGGGTGACAGTGGGGGGGCGGCGACAGCCCATAGCCTTGCTGCAACTGTCTACTTTTGATGGCTATTGTGCCTTATTCAGACTGAATCTTATCAAATCTGTTCCTAAGGCATTGCAAGATCTGTTAGAAGATGGCAGCATATACAAAGTGGGTGTAGCGCCCAAAGACGATGCAAAGTATCTATCACAGGACTATGGAGTTTACATGCGAGGCACGCTGGATGTTAGACACCTTGTGCGTTTGTGTGGTTACAGTAACGGTGGTTTGGCAACACTTTCCAAGTCTCTACTGGGCATTGTACTGGATAAAACTTGGAGGATAAGGTGCAGTGACTGGGCTGCAGAAGAGTTATCTGAAAGGCAGGTGAAGTATGCAGCAGCAGATGCTCATGTTGCTATCAAGATCTTTGTCAAACTCATCAACGACTACCATAAACCTGTTCTAATCACATGGTTTAGAACCAGTGGGGATAATAGCTGGAAGGATTTGGACATTTGCAAGAGATATGTTGACGTGCCTTATAAGGCTAATCACAATGCAGGGAAGAATGATACGAGTTCCAATCATAGGAGTAAAGAGCGAGAGGCGAGACCCGGCAAGGAGGTGGAACTGAAGCGCTACCCGCACGCCACGCGCTCCAAGCCGCTCTACCACAACTGCTTCCTGGAGGCGCCCGACGGCGAGCTGCTGTGCACCTGCGACAACAGCAAGGCCATGTGGTACGTCACAAAAGAATTAGCAGACGTAGTAAGCGAGGACCCCCTGAAGGTCCGCCTGCGCTTCGAGCCCGCGGGCCGCTCCGTGGGCGACGTGGGAAGATACTACCAGCTGACTAAGGAGAACAAGTGCGTAGTCTGCGGCGCCAACGACTCGTACATACGCAAGAACGTCGTGCCCAGGGAGTACAGGAAGTACTTCCCAGAGATAATGAAGGAGCACTCGTCCCACGACGTGGTGCTGCTGTGCGTGTCGTGCCACCAGCTCAGCAACATGCTGGACcgcgcgctgcgcgagcgcctCGCCGCGCAGTGCGACGCGCCGCTCGCCTCGCACGGGCACAGCCGGCTCACCGAGGACGTGGATTGCAAGTTAGTACACCGGCTACTGTCGAGTTGTTACACCTCAGAGATAATGAAGGAGCACTCGTCCCACGACGTGGTGCTGCTATGCGTGTCGTGCCACCAGCTCAGCAACATGCTGGACcgcgcgctgcgcgagcgcctCGCCGCGCAGTGCGACGCGCCGCTCGCCTCGCACGGGCACAGCCGGCTCACCGAGGACGTGGATTGCAAGTTAGTACACCGGCTACTGTCGAGTTGTTACACCTCAGAGATAATGAAGGAGCACTCGTCCCACGACGTGGTGCTGCTGTGCGTGTCGTGCCACCAGCTCAGCAACATGCTGGACCGCGCACTGCGCGAGCGCCTCGCCGCGCAGTGCGACGCGCCGCTCGCCTCGCACGGGCACAGCCGGCTCACCGAGGACGTGGATTGCAAATTAGTACACCGGCTACTGTCGAGTTGTTACACCTCAGAGATAATGAAGGAGCACTCGTCCCACGACGTGGTGCTGCTGTGCGTGTCGTGCCACCAGCTCAGCAACATGCTGGACCGCGCACTGCGCGAGCGCCTCGCCGCGCAGTGCGACGCGCCGCTCGCCTCGCACGGGCACAGCCGGCTCACCGAGGACGTGGATTGCAAGTTAGTACACCGGCTACTGTCGAGTTGTTACACCTCAGAGATAATGAAGGAGCACTCGTCCCACGACGTGGTGCTGCTATGCGTGTCGTGCCACCAGCTCAGCAACATGCTGGACcgcgcgctgcgcgagcgcctCGCCGCGCAGTGCGACGCGCCGCTCGCCTCGCACGGGCACAGCCGGCTCACCGAGGACGTGGATTGCAAGTTAGTACACCGGCTACTGTCGAGTTGTTACACCTCAGAGATAATGAAGGAGCACTCGTCCCACGACGTGGTGCTGCTGTGCGTGTCGTGCCACCAGCTCAGCAACATGCTGGACCGCGCACTGCGCGAGCGCCTCGCCGCGCAGTGCGACGCGCCGCTCGCCTCGCACGGGCACAGCCGGCTCACCGAGGACTTGGATTGCAAAAAAATTCGTTCAGCGGCGCGTGCTCTGCTGTACCAGTCGCGGAAGCACGTGCTCCCCGAGGCACGACGCAAGGAGCTGGAGGGCGTCATCCTGCAGCACTACGTTCAGCATGACGAGATCACCGAGGAGCTGCTCAAGGAGGCGGCCGACATGCAAGTCGTATTTGAAAACGAAGACTACGAGTGTCACGGGCGCAAGGTGATGGAGTATTACGCGAAGCGCGACGGCGTACTGCGCCTCGAGGAGCTGTGGCGGGAGCACTTCCTCGCGACCATGCACCCCCGGTACATGCCCGAGTTGTGGTCCATCAAACATAACGAGGAAAGgttaACAGTACGTCTCAAAGAAGGTCGCCTATCCGAAGAGGACAGAAAATTGCTAGGAGTctctatttaa
- Protein Sequence
- MKMSKLKLGLTSAIALGCAGAGLTYLVLQRLKEKNAADVLNDLTIDIITSEEDCDQAITKLRRKCDHSAVGFDCEWVTVGGRRQPIALLQLSTFDGYCALFRLNLIKSVPKALQDLLEDGSIYKVGVAPKDDAKYLSQDYGVYMRGTLDVRHLVRLCGYSNGGLATLSKSLLGIVLDKTWRIRCSDWAAEELSERQVKYAAADAHVAIKIFVKLINDYHKPVLITWFRTSGDNSWKDLDICKRYVDVPYKANHNAGKNDTSSNHRSKEREARPGKEVELKRYPHATRSKPLYHNCFLEAPDGELLCTCDNSKAMWYVTKELADVVSEDPLKVRLRFEPAGRSVGDVGRYYQLTKENKCVVCGANDSYIRKNVVPREYRKYFPEIMKEHSSHDVVLLCVSCHQLSNMLDRALRERLAAQCDAPLASHGHSRLTEDVDCKLVHRLLSSCYTSEIMKEHSSHDVVLLCVSCHQLSNMLDRALRERLAAQCDAPLASHGHSRLTEDVDCKLVHRLLSSCYTSEIMKEHSSHDVVLLCVSCHQLSNMLDRALRERLAAQCDAPLASHGHSRLTEDVDCKLVHRLLSSCYTSEIMKEHSSHDVVLLCVSCHQLSNMLDRALRERLAAQCDAPLASHGHSRLTEDVDCKLVHRLLSSCYTSEIMKEHSSHDVVLLCVSCHQLSNMLDRALRERLAAQCDAPLASHGHSRLTEDVDCKLVHRLLSSCYTSEIMKEHSSHDVVLLCVSCHQLSNMLDRALRERLAAQCDAPLASHGHSRLTEDLDCKKIRSAARALLYQSRKHVLPEARRKELEGVILQHYVQHDEITEELLKEAADMQVVFENEDYECHGRKVMEYYAKRDGVLRLEELWREHFLATMHPRYMPELWSIKHNEERLTVRLKEGRLSEEDRKLLGVSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -