Carc000280.1
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- DMRT2
- Assembly
- GCA_036785405.1
- Location
- CM072055.1:5057927-5065022[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-26 2.5e-22 79.3 11.4 1 47 24 70 24 70 0.99
Sequence Information
- Coding Sequence
- ATGCAAAGTGAAACGAACGGCAACGAAAACTGTAGTGAGGGTGAAAACAGTGGCAGTCGAAGGGTTCTTCGGACTCCGAAATGTGCTCGCTGTCGCAACCACGGCGTGATCTCCTGTCTGAAGGGGCACAAGAGGCTGTGTCGCTGGCGGGATTGTCGCTGCCCCGGCTGTCTGTTGGTGCTGGAGCGACAGCGTGTCATGGCTGCTCAGGTGGCTCTGCGGCGGCAGCAAAGCGCGGGCGGGCTGGTGCGCGACGGCGAGGCGGCCGCGCTTGCTGCGCGCAAGCGGGCGTACCGGGCGCGCTTGCGCAGCGTGCAGATATCGCGCCACCATGCAGTTCCTTCTACTACATCTTATGGTAACGTACTGGACGGAGATCCCTTGTGGTCTGAAAGGATCAGACGGCGCAAGGTGTTCGCGGACGCGGCGCTGCAGcacagcgcgccgcccgccgagcccgcgcccgccgcgctgtGTCGCCacctgctggccgcgctgctCACCAGCTACGCGCCCGCGCATGCGCCGCCCGCACCGCACGCGCCACGACCCAAGATATCCTTCTCTATTGAATCCATTATTGGCGTACAGTAA
- Protein Sequence
- MQSETNGNENCSEGENSGSRRVLRTPKCARCRNHGVISCLKGHKRLCRWRDCRCPGCLLVLERQRVMAAQVALRRQQSAGGLVRDGEAAALAARKRAYRARLRSVQISRHHAVPSTTSYGNVLDGDPLWSERIRRRKVFADAALQHSAPPAEPAPAALCRHLLAALLTSYAPAHAPPAPHAPRPKISFSIESIIGVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01021276;
- 90% Identity
- -
- 80% Identity
- -