Carc001773.1
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- Bgb
- Assembly
- GCA_036785405.1
- Location
- CM072056.1:10733950-10744261[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-14 4.5e-10 40.3 0.1 42 94 1 46 1 47 0.90 2 2 1.5e-51 1.7e-47 162.0 0.1 41 164 45 161 45 164 0.95
Sequence Information
- Coding Sequence
- ATGCGGTTCACGAGCGGCTGTCGCGAGGGCCACACCGAGATCGCGTTCACGGGCACCGGCACCAACCTGCAGCTCGTGTTCGACCACTCGCCCTACAACAACCGCGGCTGCGACTTTCAGAAGGAATCCGGCAAGATGCGGTTCACGAGCGGCTGTCGCGAGGGCCACACCGAGATCGCGTTCACGGGCACCGGCACCAACCTGCAGCTCGTGTTCGACCACTCGCCCTACAACAACCGCGGCTGCGACTTTCAGAAGGAATCCGGCAAGGCCCACATCGTGTCCCGATTCATCATGAACGGCGTGTGCGTGCGGTGGCGAGGCTGGATCGACCTGGAGCGCCTGGACGGCGCCGGCTGCCTGGAGCTGGACGAGGAGCGCGCCGCCATCGAGGACGCCGCGCTGCGCGACCAGATCGAGCGCTACAACCAGCGGCTGCGGGACTTCGAGGACAAGCAGCGCGCCTACCGCGAGCACGGCGAGGAGCTGCGCGCGCACTCGCAGGTGCACCAGCGCTGCCACCAGCGccagccgcacgcgccgcacgcgccgcacccgcacgccgcgcacgccgctcACCCCGTGCACATCAAGCCGCACTCCCAGGGCGCGCTCATCTCCTAA
- Protein Sequence
- MRFTSGCREGHTEIAFTGTGTNLQLVFDHSPYNNRGCDFQKESGKMRFTSGCREGHTEIAFTGTGTNLQLVFDHSPYNNRGCDFQKESGKAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRAHSQVHQRCHQRQPHAPHAPHPHAAHAAHPVHIKPHSQGALIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00776544;
- 90% Identity
- -
- 80% Identity
- -