Cpil020848.1
Basic Information
- Insect
- Coelopa pilipes
- Gene Symbol
- ftz-f1
- Assembly
- GCA_947389925.1
- Location
- OX376699.1:10951438-10957558[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.6 9.4e+03 -3.6 16.3 45 123 102 169 87 186 0.42 2 2 6e-76 9.3e-72 243.5 0.1 1 361 344 687 344 690 0.83
Sequence Information
- Coding Sequence
- ATGTTATTGAAAATGGAGCAGCAGGAGTCCACGGCGTCGTTTATTTCGTCGCTCAACATGTCGCCCTTCTCCATGAACCTGGACCAGCAGCCCTCCAGTCCCGCGATGGGCGCCACCATCCAGCAGATTGcggccgcaaccaacggcggcggcaacggcgctggcaatggaggtgggaacggtaccagcagtagcaacaacaacgccaatgcggacaacgactcttcgggcttgaacaacccggacggcgactattccacgtacacgctgcacctgggcaacgccagcggcaccaacagcagtcaacagcaccaccaccagcaacagcaacaccaccatcagcagcagcagcaatcgcagcaacaacaccacaatcacaaccaccagcaacagcaacactatcagcaacagcatcagcaatcgcagcaaccttcgcaccagaatattgccaacaaccccaatttctcgTATTCCTACATATATAACTTTGATTCACAGTACGTATTCCCAACAGGTTACCAGGATAACACTTCCTCGCACTCCCAGCAAAGCGCTGGCGGTGGGGGTGGTGGTGGTGGCCTGGGTGGCGGCGGGGGTGGTCCTGGTAGCAATGGGGGCGGCGCCAGTGCTTCCAACTCCAGCGTTGTTCTGTTGAACGGCGTTGGTCCGTCGGGTGCCGGCGGCGGTTACATGTCGCTGATCCCGCCCACTGTGGGCGCCACCAGCTCCAGTGGGCACCTGAGTGGTGTCTCCGGTGGCACCAGCGCCTCGACCGGTGCCACCGGCGAGGGCATTGATTTCAAACACCTGTTCGAGGAGTTgtgtcccgtgtgcggcgacaaggtcagcggctatcactacggccttctgacctgtgagtcctgcaaaggcttcttcaagcgcacggtccaaaacaagaaggtctacacgtgtgttgcagaacgttcctgtcacatagacaagacccagcgcaagcgatgcccatactgcaggttccagaagtgcctggaggtgggcatgaagctagaagCTGTGAGAGCCGATCGAATGAGAGGCGGGAGGAACAAATTCGGACCGATGTACAAAAGAGATCGAGCGCGGAAGTTGCAAGTTATGCGCCAGAGACAGCTCGCCCTTCAAGCTCTACGTACGTCGATTGGATCCGCTGACATGAAAGCGACACCTCTATCCCCAGGCTATCAACAAGCATATCCAAACATGAGCATAAAACAAGAAATTCAAATACCTCAGGTATCTTCCTTAACTCAGTCGCCGGATTCATCGCCCAGTCCGATCGCCATTGCGCTGGGGCAAGTAAATGCCAACGCCGGTGTTATATCGAATCCCTTGAACGGAAACACTGGTTCGAACAGTAATAACACAAGCAATACTAGTGACAGTATCAACAGGAGTAGCTCCAGCAGTTGCCACGACACCGGCACCGGCTTCGATTCTGGCACGCACCCCTCCAGCACAGCTGACTCAGTTATAGAACCCCTGAGAGTCTCACCAATGATCAGAGAATTCGTGCAGTCGATAGACGACAGAGAGTGGCAAACGCAACTATTCGCATTGTTGCAGAAACAGACCTACAACCAAGTAGAGGTGGATCTCTTTGAGTTGATGTGCAAAGTGTTGGATCAGAACCTTTTCTCTCAGGTGGATTGGGCCAGGAACACGGTATTTTTTAAAGATCTAAAGGTCGACGATCAAATGAAGTTATTACAACACTCATGGTCCGATATGCTAGTATTAGATCACTTGCATCAAAGGATTCATAACGGCCTACCCGACGAGACGCAGCTTAACAATGGACAAGTCTTTAATCTCTTAGGATTAGGTTTGCTGGGCGTGCCGCAGTTGGCGGACTACTTCAACGAGTTACAAAATAAACTACAGGACTTGAAGTTCGATATGGGCGACTATGTCTGCATGAAATTCCTCATACTTCTAAATCCGGATGTGCGAGGAATCATTAATAAGAAAACCGTTTTGGAAGGACACGAAAACGTTCAAGCCGCTCTCCTGGATTACACGTTAACATGCTATCCATCTGTGACGGTAAATCCTTCATTAACCTAA
- Protein Sequence
- MLLKMEQQESTASFISSLNMSPFSMNLDQQPSSPAMGATIQQIAAATNGGGNGAGNGGGNGTSSSNNNANADNDSSGLNNPDGDYSTYTLHLGNASGTNSSQQHHHQQQQHHHQQQQQSQQQHHNHNHQQQQHYQQQHQQSQQPSHQNIANNPNFSYSYIYNFDSQYVFPTGYQDNTSSHSQQSAGGGGGGGGLGGGGGGPGSNGGGASASNSSVVLLNGVGPSGAGGGYMSLIPPTVGATSSSGHLSGVSGGTSASTGATGEGIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRTSIGSADMKATPLSPGYQQAYPNMSIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNANAGVISNPLNGNTGSNSNNTSNTSDSINRSSSSSCHDTGTGFDSGTHPSSTADSVIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHQRIHNGLPDETQLNNGQVFNLLGLGLLGVPQLADYFNELQNKLQDLKFDMGDYVCMKFLILLNPDVRGIINKKTVLEGHENVQAALLDYTLTCYPSVTVNPSLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00352552; iTF_00624786; iTF_01023052; iTF_01023081; iTF_01426714; iTF_01426728;
- 90% Identity
- iTF_00352552;
- 80% Identity
- iTF_00352552;