Cpil014721.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Coelopa pilipes
Gene Symbol
sip1
Assembly
GCA_947389925.1
Location
OX376696.1:10893136-10896067[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-95 5.5e-91 305.8 14.3 1 275 417 687 417 687 0.99
2 2 0.03 9.4e+02 -0.0 0.0 243 269 700 726 691 737 0.66

Sequence Information

Coding Sequence
ATGTCCGACAACGAATACGAGCGATTCGAAATCTCGGACTATGACCTGGCCAATGAGTTTAACATCAACCGTCCGCGGCGGCGCCAGACGAAGCATCAACAAATCTACGGCATCTGGGCCGACGACAGCGAGAACGACAGTGAGGAGGAGTCCGGCAAGCGTGGCCGCGGCCGTCGTGGTCGTGGCGGGAAGGTAGCGGGCGGCAAACCCAAGGACTACACGGCGCCAGTGAGCTTCGTTGCCGGTGGCATACAGCAGTCGGGGAAGAAGAACAAGCGGCAGGACGATGACAACGCCGACGACGGAGACAAGGGTGGTGAAATCACCGACGAAGAAGAAGATGAGCGGCCCTCGTTCGGACGGAAGCAGCCACAGCTCATGGAGCAGTCGAGTGGGTCCAGCGACTCCTCGGAAGAGCAGCCGAAGAAGGCGCCGCCCCCTAAACGCGGCGGCTTCGGCGCCCAGAACAAATCGCACAGCATGGGAAGCGACCGCAACGTAGGCGCGTGGGAGCAGCACACGCGCGGCATCGGAGCCAAGCTGTTGCTGCAGATGGGTTACAAGCCTGGCAAGGGCCTGGGCAAGGACTTACAGGGAATCGCGCAGCCGGTGGAAGCCCACGTGCGCAAAGGACGTGGCGCCATCGGAGCCTATGGGCCGGAGACGGCAGCAAGTGTTGGTGGCAAAGGCCACCAACCCAAGGAGGACGAGGACGAGCGCGAGGCCAAGGAGTTCAAGGAGAAATTGAACAAGTGGAAGAAAGGTGGCGATGCGCGGCCGGACAAAAGCAAGCGCTACTACTACAAGTCCGTCGAAGAGGTCATCGAGAAGGGGAAGAAGTCCAACTTCATGCTGCCGGAGAAGATAAGCCACAAACTGGGCAACGTACCAGTCATCGACATGACGGGACCCGAGAAACGCGTACTTAGTGGCTACCATGCTCTGGCCCAGAACAAGGTGGTCGACGAAGATCTCTACGACCTGCAAGCAACAACAGCAACGAAGCAGTCCGTGAGCTTCGCCTTGCCCGAGCTGATGCACAATCTAAATTTGATCGTGGATCTCTGCGAACGCGATATCATCGACTTAGACAAGGCCGAACGGGCGGCCAGCGACAGGCAGCACTCACTAGAGCAAGAGCGGAAGAACTTAGAGGAAATCGTCAACCTAGAGAGCAATCACATACACACCCTGGAGAAAGTGGAGGCCCTGGTGGATGAGCTGACCAGTGCTGAGTCCAATTTGACGTTGGACAGAGCAGAGAAAATATTTCTCGAACTGCAAAAGGAGTATCCTGCTGAGTTTCAAGAGTTCGGTTTGGCCGACCTGGCTGCCGGCATCATCGCTCCACTGGTCAAGGCGACTTTGGACGAGTGGCAGCCTTTGTTGGAACCCACGCATCACATAGATTTGGTTAAGAAATGGCGCTGCATCTTGGAGAAGGCCTCTGGCGATCAACAATCCGAAACTCGCAACGTTTTCGACCCGTACTCATCGGTGATCTGGGCTGGCGTGATACCCAGCTTCCGCACCTGCTCCGCGGCCTGGAATCCCAAGCAGCACCAGAAAATGGCGGCTCTACTGGATAGTTGGGCCCCGCTGTTCCCAAGCTGGATACTGGACTCGGTGCTGGAGCAGTTGGTGTTGCCGCGTCTGGTGTCCGGTGTCCAAGAGTGGGATCCACTCACAGACACTGTGCCGATTCACATTTGGATCCTGCCCTGGACAACCATTCTGGGCCACAAAATGGAGGAGTCCATCTTCCCGACGATTCGCGTAAAGCTCGGCAACGCGCTGCAGGCTTGGATGCCGCAGGACCGTTCAGCTCGGGCCATGTTGACGCCTTGGAAGGGCGCCTTTGGCGCGACCGAAATGCAAACCTTCCTCATGCAGCACATCATTCCCAAACTGCAGCTCGTCCTCAACGAGTTCATCATCAACCCCTTGCAGCAGAACCTGGAGCTCTGGAACCAGGTGTGGGAGTGGCACGAACTCATTCCGCCGATACACATGGCACAACTGCTGGACAAGCACTTCTTCCCCAAGTGGATGCAGGTGCTGGTGATGTGGCTGAATCAATCGCCCGACTATGCGGAGATTTCGCGCTGGTACACCGGCTGGAAGAGCATGCTCTCCGAGGAGGTTCTGCAGGAGCCCTGCATCAAGGAGCATCTGCGGCGCGCCCTCGAAATGATGCATCGCGCTACGGACGTTGCCAGCGTTCCGCTAAACGTTCCCGGTGTTGGCATCCCAACACCAGTCATGACGTCGACGCCTCCGCCACCGCAGCCACCGCCGGGACTCATCGGTTTCCAGCTGGCCGTGCCCGCGCAGTTGGAGTTCAAAGAGTTGGTCTCCCAGAAATGCGCCGAGTTGGGAATACTGTTCGCTCCGATGCCGGGCCGACGAGAGCTAGGCAAGCAGGTCTACCGAGTGGGCAAGCTCTACTGCTACATCGACCGCAATGTCATCATGCTGAGCGACAGCAGTTTCAGCAACTGGATGCCGACGTCGCTGTCGCAAATGTTGGAGCATGCTAGGACGGGTGTGCTCTAA
Protein Sequence
MSDNEYERFEISDYDLANEFNINRPRRRQTKHQQIYGIWADDSENDSEEESGKRGRGRRGRGGKVAGGKPKDYTAPVSFVAGGIQQSGKKNKRQDDDNADDGDKGGEITDEEEDERPSFGRKQPQLMEQSSGSSDSSEEQPKKAPPPKRGGFGAQNKSHSMGSDRNVGAWEQHTRGIGAKLLLQMGYKPGKGLGKDLQGIAQPVEAHVRKGRGAIGAYGPETAASVGGKGHQPKEDEDEREAKEFKEKLNKWKKGGDARPDKSKRYYYKSVEEVIEKGKKSNFMLPEKISHKLGNVPVIDMTGPEKRVLSGYHALAQNKVVDEDLYDLQATTATKQSVSFALPELMHNLNLIVDLCERDIIDLDKAERAASDRQHSLEQERKNLEEIVNLESNHIHTLEKVEALVDELTSAESNLTLDRAEKIFLELQKEYPAEFQEFGLADLAAGIIAPLVKATLDEWQPLLEPTHHIDLVKKWRCILEKASGDQQSETRNVFDPYSSVIWAGVIPSFRTCSAAWNPKQHQKMAALLDSWAPLFPSWILDSVLEQLVLPRLVSGVQEWDPLTDTVPIHIWILPWTTILGHKMEESIFPTIRVKLGNALQAWMPQDRSARAMLTPWKGAFGATEMQTFLMQHIIPKLQLVLNEFIINPLQQNLELWNQVWEWHELIPPIHMAQLLDKHFFPKWMQVLVMWLNQSPDYAEISRWYTGWKSMLSEEVLQEPCIKEHLRRALEMMHRATDVASVPLNVPGVGIPTPVMTSTPPPPQPPPGLIGFQLAVPAQLEFKELVSQKCAELGILFAPMPGRRELGKQVYRVGKLYCYIDRNVIMLSDSSFSNWMPTSLSQMLEHARTGVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00351856;
90% Identity
iTF_00351856;
80% Identity
-