Cfri002118.1
Basic Information
- Insect
- Coelopa frigida
- Gene Symbol
- dmrta2
- Assembly
- GCA_017309665.1
- Location
- CM029561.1:33725638-33727839[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-25 6.5e-22 77.4 8.4 1 47 31 77 31 77 0.98 2 2 0.4 2.1e+03 -1.1 0.2 23 32 332 341 324 343 0.77
Sequence Information
- Coding Sequence
- ATGGACACCAATCCGAGTGGCAAGTTGGTCAATCCGAGTGGCAAGTTGGCCAAATCCAGCGAGACGAGCCAGAAAAACGCCGCCTCGAATCGGGTGCCGAAGTGCGCTCGCTGTCGCAATCACGGCATCATCTCGGAGCTGCGGGGCCACAAGAAGCTCTGCACCTACAAGAGCTGCAAGTGCCCCAAGTGCGTTCTGATCTTCGAGCGGCAGCGCATCATGGCAGCACAGGTTGCTCTCAAACGGCAGCAGGCCGTGGAGGATGCGATCGCTCTCCGCCTGGTGGCCACCAAGACGGGCCAACAAATGGACGCCCTGCCGCCGGGCAGCATCTTCGGCCTCACCGTCACGGAGCCCGTCCACAGCCGCCGGTCGCCGCAGCCCGAGTCGTCGTCGTCGTCGACGTCACCGCCGCCCCCTCCGCCTCAGGATGCGTCGCCGTCGGAGAGAGCCGTGGCCGAGGACCTGAGCACATCGGCCCCGGGTCGCCAGAACTCGGAGACGAATGCGGATCCGCCCTACCCATTGGCAACAGGTTCCACCCGCAGCCAAAGCCAAAGCCACAGTCAGAACCAGAACCAGAACCAGTTCCACCCAGGGCCCGGCGCCGTCTCCCAGGCCGCCATCGATATGTTGGCCCAGCTCTTCCCGAATCGCAAACGCTCCGTGCTCGAGTTGGTGCTGAAACGTTGCGATCTGGATCTGATCCGAGCCATTGAGAATATTTCGCCATCGACTCCGGTGCACGGACAGCAGCCGTCGCCGACTCATGGACATGGGCAGGAGTTGCGAAGCGCCTTCCGTCCCGTGGCTGTGGATAAGTTCCCGAAGACCTTCGATCACAAGAACGCATTCGATCACAAGAACTCGTATGTTTCGCCCCAGGCCCAGGTCCAGACCCAGCCGATGGCGCCGCCCATTTGTGCTTACCCCAAGTGGATTGTGCCGCTCTCGTTCCCCGTCACCATGGGCCATCTCTCGAATCTGGCGCCGCGCTGCACGCTGCCCAATTGCGCCTGCATGCAGAGCTTCCAGTTCAACTAA
- Protein Sequence
- MDTNPSGKLVNPSGKLAKSSETSQKNAASNRVPKCARCRNHGIISELRGHKKLCTYKSCKCPKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVATKTGQQMDALPPGSIFGLTVTEPVHSRRSPQPESSSSSTSPPPPPPQDASPSERAVAEDLSTSAPGRQNSETNADPPYPLATGSTRSQSQSHSQNQNQNQFHPGPGAVSQAAIDMLAQLFPNRKRSVLELVLKRCDLDLIRAIENISPSTPVHGQQPSPTHGHGQELRSAFRPVAVDKFPKTFDHKNAFDHKNSYVSPQAQVQTQPMAPPICAYPKWIVPLSFPVTMGHLSNLAPRCTLPNCACMQSFQFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -