Basic Information

Insect: Coelinius sp
Gene Symbol: -
Assembly: GCA_035578325.1
Location: JAOZGT010000012.1:4354088-4357828[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.2e-06 0.00024 21.8 1.7 1 23 257 279 257 279 0.98

2 9 2.1e-08 2.3e-06 28.1 1.6 3 23 287 307 285 307 0.98

3 9 0.00021 0.024 15.5 0.5 1 23 313 335 313 335 0.97

4 9 9.1e-07 9.9e-05 23.0 1.5 1 23 341 363 341 363 0.99

5 9 1.6e-05 0.0017 19.1 1.7 2 23 485 506 484 506 0.96

6 9 2e-09 2.2e-07 31.3 1.6 1 23 512 534 512 534 0.98

7 9 0.00046 0.051 14.5 0.6 3 23 542 562 540 562 0.97

8 9 6.1e-05 0.0067 17.2 1.4 1 23 568 590 568 590 0.99

9 9 0.014 1.5 9.8 0.8 1 23 596 620 596 620 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.2e-06	0.00024	21.8	1.7	1	23	257	279	257	279	0.98
2	9	2.1e-08	2.3e-06	28.1	1.6	3	23	287	307	285	307	0.98
3	9	0.00021	0.024	15.5	0.5	1	23	313	335	313	335	0.97
4	9	9.1e-07	9.9e-05	23.0	1.5	1	23	341	363	341	363	0.99
5	9	1.6e-05	0.0017	19.1	1.7	2	23	485	506	484	506	0.96
6	9	2e-09	2.2e-07	31.3	1.6	1	23	512	534	512	534	0.98
7	9	0.00046	0.051	14.5	0.6	3	23	542	562	540	562	0.97
8	9	6.1e-05	0.0067	17.2	1.4	1	23	568	590	568	590	0.99
9	9	0.014	1.5	9.8	0.8	1	23	596	620	596	620	0.95

Sequence Information

Coding Sequence: ATGGAGAGACCCCAGGGCCAGTGGGCACCAGGGCCGGGTTCTCTCCAGGATGGTAGTTTGTATGGCCAACAACAGCCCCAAAATCAACAGCCACAGGCACCCCAGCCACAGCAACaggcatcatcatcatcgggTAGCCCACAGCAGGCCTGTGGTCCACCAGTTGAGGGTAATGAAACGGGACCACCGCCAATGGCATCACCAGTACCATCGCCATATCCCTCAGGACCGAGTGACCAGCAAGCCTTAACACCCCCAGATGATGATATACAGTCTGGTCAAACGACAGCAGCTCAACAACAGGcccaacagcagcagcaacagcaacaacaacaacagcagcagcaacagcagcaacaacaagcAAGCCAACAACAGCAGAGTGGTCAACAGTCACAACAACAGGCCAGTGGTCAGCAGGAGCATTCACCACAGCAACAATTGACACCCCATGAGGTCGAAAGAGGTGACTGTTTTCCTGGTACTGGGGATCTACAACAATATCCTCAACACTACTTCAAAGATGCCCGACCACATGCATCACCCTCAGTACCACCTCACATGCTAACACCCGGTGGTTTTTCAGCACTACATTATCTAAAACAACCTGGTGTTATGCTGACATCACTTGGACAAGGCGATGGTGGTGGAAGTTTAGAAGCACATCAGTATGCTGGTACTGGTGGTGCTAATATGGCTAATGTATTGCCTGATATTGTACAACAAAATGGCAAATCAACGAAAGGTGCAAACAGTGATTTAAGACTATTCAAGTGTTTAACGTGTGGTAAAGActttaaacaaaaatcaacGTTATTACAACACGAGAGAATTCATACAGACAGTAGGCCATATGGTTGTCCCGAGTGCGGCAAGAGATTTCGTCAACAATCACATCTAACACAACATCTACGTATACATGCTAATGAGAAGCCATTTGCATGTGTTTACTGCGAGCGTACGTTCCGGCAGCGCGCCATCCTCAATCAGCATCTACGCATACACTCGGGTGAGAAGCCATACCAATGTCCGGAGTGCGGAAAACACTTCCGTCAGAAGGCGATCCTGAATCAGCACGTCCGCACACACCAAGATGTGAGTCCGCATCTGATCTTCAAGAATGGCATGACACCAACCCTCTGGCCTCAAGACGTACCCTTTCCCCCTGAGGATGGTAAAGAAGAGGTAGCCTCAACATTCGGTGACAATGACACCCAATCAGGTGCATTTAGTCCATCGCCGGATGGCAATTCAATACAATATCCAGCCTATTTCAAGGATCAAAAGGGTGGTAATCATGCTGTATTTGGTGCTGGTGGACCAAGTAGTTTTGGTGCCCTTCAATATATAAAACAACAACAGGGTAGTGGTGGTAATGGTACAAATGGTGGTAAATCATGTTTACCAGATGTAATACAACATGGAAGATCAGCTGGTATGCCATTGTACGTACGTTGTCCAATATGTCAAAAGGAATTTAAACAAAAGAGTACATTATTGCAACATGGTTGTATACATATTGAATCACGGCCATATCCATGTCCCGAGTGTGGAAAAAGATTCAGACAGCAGTCACACTTGACCCAACATTTGCGTATACATACTAATGAAAAACCATACGGTTGTGTTTATTGTGGTCGTAATTTTAGACAGAGGACCATACTTAATCAACATTTGCGTATACATACAGGTGAAAAACCCTACAAGTGTCAACAGTGTGGTAAAGATTTTCGACAAAAAGCTATACTTGATCAGCATACACGTACACATCAGGGTGATAGGCCATTTTGTTGTCCAATGCCAAATTGTCGTAGACGTTTTGCAACTGAGCCAGAGGTTAAAAAACATATTGATAATCATATGAATCCACATGCTAGTAAAGTACGTAGAAATTCTAGCAGTGATGTTAAAACAACTGGTGGTACATCAACAATTGGTCCTGTACCAGTGCCACGTGGTTTAACACCAACAGTTGTTAAGCCAGAACTTTATTTTCCCCAGTGTTATGCACCAGCATTTAATCATCAACCACCAGTATCATCATCACAATTTCCTGGACAAACTAATGGTGTTACAGTTACGGGTGAATTTAAAACACCATCGGCATTACCACCCCAGTGA
Protein Sequence: MERPQGQWAPGPGSLQDGSLYGQQQPQNQQPQAPQPQQQASSSSGSPQQACGPPVEGNETGPPPMASPVPSPYPSGPSDQQALTPPDDDIQSGQTTAAQQQAQQQQQQQQQQQQQQQQQQQASQQQQSGQQSQQQASGQQEHSPQQQLTPHEVERGDCFPGTGDLQQYPQHYFKDARPHASPSVPPHMLTPGGFSALHYLKQPGVMLTSLGQGDGGGSLEAHQYAGTGGANMANVLPDIVQQNGKSTKGANSDLRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPFACVYCERTFRQRAILNQHLRIHSGEKPYQCPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGMTPTLWPQDVPFPPEDGKEEVASTFGDNDTQSGAFSPSPDGNSIQYPAYFKDQKGGNHAVFGAGGPSSFGALQYIKQQQGSGGNGTNGGKSCLPDVIQHGRSAGMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCGRNFRQRTILNQHLRIHTGEKPYKCQQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHASKVRRNSSSDVKTTGGTSTIGPVPVPRGLTPTVVKPELYFPQCYAPAFNHQPPVSSSQFPGQTNGVTVTGEFKTPSALPPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00214532;
90% Identity: iTF_01273271;
80% Identity: -