Basic Information

Insect: Coelinius sp
Gene Symbol: TT1
Assembly: GCA_035578325.1
Location: JAOZGT010000027.1:142213-144410[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00014 0.015 16.1 0.1 2 23 7 29 6 29 0.94

2 18 5.9e-05 0.0064 17.3 5.8 1 23 33 55 33 55 0.99

3 18 1.6e-05 0.0018 19.1 0.4 1 23 61 84 61 84 0.95

4 18 3.3e-06 0.00036 21.3 0.9 1 23 91 114 91 114 0.98

5 18 4 4.4e+02 2.1 0.6 2 14 118 130 117 136 0.81

6 18 0.0049 0.54 11.3 2.1 3 23 148 168 147 168 0.97

7 18 0.00074 0.081 13.8 0.3 2 23 175 197 174 197 0.94

8 18 0.00053 0.058 14.3 0.5 2 23 202 223 201 223 0.96

9 18 6.6e-06 0.00073 20.3 2.2 1 23 229 251 229 251 0.98

10 18 2.8e-05 0.0031 18.3 0.8 1 23 354 376 354 376 0.98

11 18 6.9e-07 7.6e-05 23.4 1.9 1 23 382 404 382 404 0.97

12 18 0.14 15 6.7 1.3 1 23 411 434 411 434 0.95

13 18 7.4e-06 0.00081 20.1 1.4 1 23 440 462 440 462 0.98

14 18 0.2 22 6.2 3.4 2 20 468 486 467 490 0.82

15 18 0.00022 0.024 15.5 4.4 1 23 497 519 497 519 0.94

16 18 0.00053 0.058 14.3 5.2 1 23 523 545 523 545 0.98

17 18 0.048 5.2 8.1 3.1 1 23 551 573 551 573 0.96

18 18 1.6e-06 0.00017 22.3 0.8 1 23 579 601 579 601 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00014	0.015	16.1	0.1	2	23	7	29	6	29	0.94
2	18	5.9e-05	0.0064	17.3	5.8	1	23	33	55	33	55	0.99
3	18	1.6e-05	0.0018	19.1	0.4	1	23	61	84	61	84	0.95
4	18	3.3e-06	0.00036	21.3	0.9	1	23	91	114	91	114	0.98
5	18	4	4.4e+02	2.1	0.6	2	14	118	130	117	136	0.81
6	18	0.0049	0.54	11.3	2.1	3	23	148	168	147	168	0.97
7	18	0.00074	0.081	13.8	0.3	2	23	175	197	174	197	0.94
8	18	0.00053	0.058	14.3	0.5	2	23	202	223	201	223	0.96
9	18	6.6e-06	0.00073	20.3	2.2	1	23	229	251	229	251	0.98
10	18	2.8e-05	0.0031	18.3	0.8	1	23	354	376	354	376	0.98
11	18	6.9e-07	7.6e-05	23.4	1.9	1	23	382	404	382	404	0.97
12	18	0.14	15	6.7	1.3	1	23	411	434	411	434	0.95
13	18	7.4e-06	0.00081	20.1	1.4	1	23	440	462	440	462	0.98
14	18	0.2	22	6.2	3.4	2	20	468	486	467	490	0.82
15	18	0.00022	0.024	15.5	4.4	1	23	497	519	497	519	0.94
16	18	0.00053	0.058	14.3	5.2	1	23	523	545	523	545	0.98
17	18	0.048	5.2	8.1	3.1	1	23	551	573	551	573	0.96
18	18	1.6e-06	0.00017	22.3	0.8	1	23	579	601	579	601	0.98

Sequence Information

Coding Sequence: ATGCTGACAGCAATAGTCGAATGTCCCATCTGTCACAGAAAATTCGCCAATCGTGCTGCTGTTGAGAGACACACAGCATCAGCCCACAAATCAGCCTACAAGTGCAAACACTGTGATACGTGTTTCTTCACACAGACAGGTTTGGACCAGCACATGGCGACACATAAGCATCCCCTGGTATTCCCCTGTCCCCAGTGTAAGAAGAAATACAAACGTAGAGATGGCCTGAATCTGCATATTGTCAGGGCACACAGTAAAATTGAGGCGAAATTTACTTGTGACGACTGTGAAAAATCTTTTCACTTGAAGGCTGATTTAACTGCCCACATGAATCGTGCTCACATGCTTCAAGAGTGCaaattttgtcataaaatagtTAAAGACCTGAAGAATCACGAGGATGCGcacaagaagaaaaatgctGATATCATTGATGAGAATTGTGATCTGTGTGGCCAGCGTTTCAGATCAAAAGCTAGATACGACAGTCACAGAAAAAAACACAAGGATGGTAGAAATCTCGAGTGCAAAGAGTGTGGCCTGGTGTTCCCTGGTCATCgttcattgattaatcatcGTGACAGGGAGCACAGATCTGGGACAACTTGTGAAATATGCAAAAAAGTATTTTACTCCATcacaaattattatcaacatgTTTTGGTTCATGCTGGAATAAAGCCCTACAAGTGTGATGTGTGTTCAGAGAATTTCAGTCAGAGAACGAGTCTCAAGAGACATCGAGAGAGGCATGAGGGACCATTACCTCCATTCGATGAAGTTACCAGGATTGCACACCTTGCAAAGGAATGTCAAGAAGATTATTTAGAGCAAGAACATGATATCGATCCTCTCTCAACCCTCAAAACATCACAGCAATCACCAAAAACAAAACCAGAGAAGactaaaaatgtcaagaagaTAATAATAACCAGAATCATACGTCGTTGCCCAAAAAGGCCACCAAAATCtccatcaccaccaccaccaccatcattACCACAACTCCAGAGGCAGCCTTCAGTAATTTTATCAGAGGACACACCACTCTTCAAACCCTACGAGTGTGAATTATGCCCAGCGAACTTTGACCGACGCAGTAAACTCCTCAAGCACATGTTTAAACACAGTGATTCTCGTCCCCACAAGTGCACAGTGTGTAATAAAGCTTTCAAGACCCCTACCTATCTACTGAGACACATGGATATCCATCAGGAACCTGAGGAGCTCTTTAAATGTGAATTATGCGAGTTTCAAGCAAAATCAAAGCCTTATCTCAAAATACACTTTATCAGAAAACACACAGAAGGCTGGAGTTTCACCTGCAAACTATGTGGCAAGATGTTCAAGATCCAGGGAGACTACACAACCCACATGAAGGACCACGATGGTGAATCCTGTATCTGTGACATATGTGGATACGAATATCCAAACAAAAGCTCTCTCTACTTCCACAAACATAATAAACACAAAAATAAAGTCAAGGAATTTCAGTGCAACGTTTGCAAGAAACATTtcaagagtaaaaaaaatctagacaGTCATTCAGAACTGCACAACATGATCTTTGTGTGTGAACACTGTGGAATGAGATTCAAGTGCAAGTATGGATTGACTAAACACCTGAAGATTcataagaaagaaaaatcttaTCTCTGCAcagtttgtaataaaaatttcagcTGTTTGAGTTCCCAGAAAATTCATCTGTTGACTCATGTGGGAGAGAGACCCTATGTTTGTGATATATGTGGTAAAAGTTTTACTCAACGATCTCCAATGATGCTGCATAGGAAAAAACATCCTGGAACTCATCCTCCTCTACCTCCTGTGAAAATCTCTGGACTACTTGGGGATATGAGGGGgacaattgttaataacaatggAAGCTGA
Protein Sequence: MLTAIVECPICHRKFANRAAVERHTASAHKSAYKCKHCDTCFFTQTGLDQHMATHKHPLVFPCPQCKKKYKRRDGLNLHIVRAHSKIEAKFTCDDCEKSFHLKADLTAHMNRAHMLQECKFCHKIVKDLKNHEDAHKKKNADIIDENCDLCGQRFRSKARYDSHRKKHKDGRNLECKECGLVFPGHRSLINHRDREHRSGTTCEICKKVFYSITNYYQHVLVHAGIKPYKCDVCSENFSQRTSLKRHRERHEGPLPPFDEVTRIAHLAKECQEDYLEQEHDIDPLSTLKTSQQSPKTKPEKTKNVKKIIITRIIRRCPKRPPKSPSPPPPPSLPQLQRQPSVILSEDTPLFKPYECELCPANFDRRSKLLKHMFKHSDSRPHKCTVCNKAFKTPTYLLRHMDIHQEPEELFKCELCEFQAKSKPYLKIHFIRKHTEGWSFTCKLCGKMFKIQGDYTTHMKDHDGESCICDICGYEYPNKSSLYFHKHNKHKNKVKEFQCNVCKKHFKSKKNLDSHSELHNMIFVCEHCGMRFKCKYGLTKHLKIHKKEKSYLCTVCNKNFSCLSSQKIHLLTHVGERPYVCDICGKSFTQRSPMMLHRKKHPGTHPPLPPVKISGLLGDMRGTIVNNNGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00438916;
90% Identity: -
80% Identity: -