Csp011376.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Coelinius sp
Gene Symbol
Paxbp1
Assembly
GCA_035578325.1
Location
JAOZGT010000007.1:8008983-8012601[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-30 2.5e-26 93.4 1.0 3 272 560 768 558 770 0.88

Sequence Information

Coding Sequence
ATGTCtctttttaataaaaaacCAAAGAGAAATATCAGAAGAAGATCATTCAATGATGAATCCGAGGACAATGAAAATAGGATGGATGTTGATCAGGGACAGAGCATTAAGGTTAAGCAAAAGAAAAAGGATAAGCCTAAGCAGACGCTCCTTAGTTTTGGCGAGGAGCTGGATGAagCTGACGATGGTGAGgtttttaaagtgaaaaaaacatggaggagcaaaaaactgatgaaacaACTTGATCacgagaggagaaaaaagaaaggtGAAGAGAAAATGCAAGTGGACTCTGAGCAAGCAAACATGTCCATTAAGTGCGACAAAGATTTAGAAATAAAGACAGATGATCTAGTAgttaaaataaaaaataccggACCACTTATATTGAATGGAAAAGCTGCACTGGTAGCTGGAAAGGATGATTATAGTTCTGAGGATGaggagaatgataaaaatcacatATTTAGAACAAAAAACAATGAGCAATCGGATACCATGAAACTCCTTTTACAAAgTGGTTGTATTCCTGATGCAGCTATGATTCATGCTGCAAGAAAGAAACGTCAGAAGGCTAGAGAATTGGGCACTGATTATATACCAGTGGAAGAACAAACGGAAGATAGAGGAAAATCTCGATTAATTCGTGAAGAAGATCATGATCGGAGTGATAATGatgatcatgatgatgatgattatgatgttgatgatgatgatgatgatgatgatgataatgacaGAATAGATATGACTGTTAATACTGAAGCGAGAGATAAAGAGAAGAGGAGAGAAGTATTTTTAGCTTCTCAAGTATCAATAAAACttTCAGACAATGAGAGTGAACATGGATTTGAAGAAGAGGAGTGGGAAGTTCAACAAATTAAGAAAGGTGTAACTGGAGCTCAGATTGCAGCTGCTCAACAAGATTCAATAATGCAACAACAGTATACGATGGGAATCAATACAAACCAAATAATTGGAGCTTCTGGAGTTCCCATGGAGATGGTTTTAATGCCAGCCCCACCACCTCCTCCCTCCATTCATCCCCCAGATCCAACGAAAATTGTCCCAGTGACGTTACAACaagttgttgaaaaaatgaaagcaAGAGTCGCAGGTCTCCAACAGATTTACAGACGTCATCAACTGGACCAAATACAACTGGATAATGAACTTGACCAGACACTGAAGGAGCTGGATGAGGGCTCATTACGTGCACCTGAATTGGCACAACGCTTCAGATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGACGAGAAGCTGCCTCTACTGACTGGACTAGAGCAAAAATGGTTGGATTTGTACAGTGACAGATctaatgaattgattgaacGACGAAGACAGGACACGAGGGATCAAGCTGAGGAAATTACTTCTGCTGCAAgAGGACAACCAGTTCGCAGAGGACCAGAGGATGATGCCCGTATTCATCGAGCTACAGAGCGTGAGGGCAGACGTGCCCGACGTCGAAGAGCTCGTGAATTAAATCGCATTATGCCAAAACATATAGACGGAATGTCCAGCGATGAGGAAGTCACAGAGCAACAGAATCTAGTATTTAAGCAGACAAaagaggaaattgacgaagAGAGCCAGGAGATATTTTCTGATGTAATGGATGACTTTTGTTCAGTTCGAGGTATTTTATTAAAGTTAGAATCATGGAGGGAGAATGATATGGAAGCCTATACTGAAGCCTACGTCTCTCTATGCATTCCAAAAATGATTTCTCCAATAATTCGATTGCATCTGATAACGTGGAATCCACTGATGGAGAGTGCTGATGTTGAGAGGACCAAATGGTACAATTCTTTATTACTCTATGCCCTCAATaaaggagaaaatgaagagagCCTAAAAGGTGATCCTGATATACGATTAATTCCTctgacaattgaaaaaattattctaccCAAGTTGACTTGTATTGTGGAGAAAATTTGGGATCCATTGTCCACTTCTCAGACACTCAGACTTGTTGGAACTGTCAGTCGTCTTGTTCGAGATTATCCAAATTTAAATGAGACTTGTAAAAAtcttgagaaattatttaatacaaTTTTAGATAAAATCAAATCAGCTGTTGAAAATGATGTGTTCATTCCAATATTTCCCAAACAAATTTTGAACACAAAACATATGTTTTTTCAACGACAATTCACAATGGCTGTCAAATTGCTGAGAAATATATTGAGTTGGCAGGGATTGCTTGGGGATAcgcaattgaaaaatttggcTCTGGGATCACTTTTGAATCGATATCTTTTGGCTGGATTAAGGGTTTTGCCTCCAGTGGATGCTCTCACTAAAGCTAATATGATAATGAGTACTCTACCAAGAGCTTGGCTCCAGGGTACTACAATCGATCATCTCAAAATGTTTGCTACACTTATACAACAATTGAGCGATCAATTGGATCAAGCAAATCCTGCCCACAATGAAGCCTGGGATTATGCAAAATCCATTCTGTCGATAATTAAGCCACAGTAA
Protein Sequence
MSLFNKKPKRNIRRRSFNDESEDNENRMDVDQGQSIKVKQKKKDKPKQTLLSFGEELDEADDGEVFKVKKTWRSKKLMKQLDHERRKKKGEEKMQVDSEQANMSIKCDKDLEIKTDDLVVKIKNTGPLILNGKAALVAGKDDYSSEDEENDKNHIFRTKNNEQSDTMKLLLQSGCIPDAAMIHAARKKRQKARELGTDYIPVEEQTEDRGKSRLIREEDHDRSDNDDHDDDDYDVDDDDDDDDDNDRIDMTVNTEARDKEKRREVFLASQVSIKLSDNESEHGFEEEEWEVQQIKKGVTGAQIAAAQQDSIMQQQYTMGINTNQIIGASGVPMEMVLMPAPPPPPSIHPPDPTKIVPVTLQQVVEKMKARVAGLQQIYRRHQLDQIQLDNELDQTLKELDEGSLRAPELAQRFRYYQELRGYVTDLVECLDEKLPLLTGLEQKWLDLYSDRSNELIERRRQDTRDQAEEITSAARGQPVRRGPEDDARIHRATEREGRRARRRRARELNRIMPKHIDGMSSDEEVTEQQNLVFKQTKEEIDEESQEIFSDVMDDFCSVRGILLKLESWRENDMEAYTEAYVSLCIPKMISPIIRLHLITWNPLMESADVERTKWYNSLLLYALNKGENEESLKGDPDIRLIPLTIEKIILPKLTCIVEKIWDPLSTSQTLRLVGTVSRLVRDYPNLNETCKNLEKLFNTILDKIKSAVENDVFIPIFPKQILNTKHMFFQRQFTMAVKLLRNILSWQGLLGDTQLKNLALGSLLNRYLLAGLRVLPPVDALTKANMIMSTLPRAWLQGTTIDHLKMFATLIQQLSDQLDQANPAHNEAWDYAKSILSIIKPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00728653; iTF_00047961; iTF_00046973; iTF_00046144; iTF_00438750; iTF_00438075; iTF_01273777; iTF_01273091;
90% Identity
-
80% Identity
-