Chom005113.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cochliomyia hominivorax
Gene Symbol
dmrta2
Assembly
GCA_004302925.1
Location
PYHX01000274.1:1206879-1211633[-]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-27 1.1e-23 82.7 10.5 1 47 37 83 37 83 0.99

Sequence Information

Coding Sequence
ATGAGTTTACCCAGTGGTGTTGATATGCAAAATCTCATGTCTCAACATCCAGTTTTAGGTGCCTTGCCACCAGCATTCTTCTTACGCGCCGCTTCGGAACGTTATCAACGTACACCCAAATGTGCCCGTTGTCGAAATCATGGAGTGgttaGCGCCTTAAAAGGTCACAAACGTTATTGCAGATGGCGCGATTGTTTGTGTGCGAAATGCACCCTAATTGCTGAACGCCAACGTGTTATGGCCGCACAGGTTGCTTTACGCAGACAACAAGCACAAGAGGAAAATGAAGCCAGAGAATTAGGACTTTTATACACAAGTGTACCATCACGTGTGTCATCACAAAATGGCAACGAGAATACCACAACGGCGACTTCATCACAATTATCACCACAACAGACATCAGCAAATGGAGTTTTTCATCCGGGCATACCTTCACCACCAAGTGATGGCATCGATTCCACTAATAATTCTACCCACCATCACAATCGTATGCCCTTTAGCAATGGCAATTCAGGAGATTCAGATTCTGAAATGCGTTTAAGAGCTGAAAGATTATCAATGGGTTTCTCACCCGATCGCACTGAAGTGGAAAGTCCTGgCTCCAAACGTGCACGTCTCTCTAATGAAACCGATCAAGATACCGGTTCTGAATCTGCCCCTAGTAGTCCCCATCCCAAGGGTTATAATAACAATGGAAATCTCTCACCTGCTCGCACTGGACCACCTAGTTCGCCAGAATCTGATTTAGATGTCGACTCAGCACCCGATGAGGCTACACCCGAAAATCTTAGTCTGAAAAAAGAAGATTCTACCTCTCCACCTCATACGCCCTCTAACGAGAGTATGCACATGTTGCGAACATTTAACAATGGTAATGCTCAAGGTTTTATGCCGTATCATCATACACAATTTTTAGCAGCGGCCGCAGCCTCAGCTCATTCTCATGCCCAGCATTCACCTCATCATCCTCAACAGCCTCAAATGCCACCCCAACATCCTGGTTCAGCCACACAACAACGTTCCCCAGTAGATGTTTTAATGCGCGTCTTTCCCAATCGCCGTAGAAGTGATGTTGAACAATTATTACAACGTTATCGTGGTGATGTTTTACAAACCATGGAAGCCATGATTTCAGGAGAGGATATGCTTACCACAACTACCAGTTCACCACCAAATGTACCACCATCTCCTCCATTTCCCTTAAAATCAGCATTCTCACCATTAGTTCCTCCAGCAGCGGTATTCGGTTCGCCCACCCATAGATATCCACCATTTATGCAGGCCCATGCTAAACGTTTCTTAACAGCTCCCTATGCAGGAACCGGTTATCTACCTGGTGTCATAAATCCAGCTGATGTCGAACAATCTGAATCAAATGGTGGCACGTCAGTAGATCGCAATAGTAATGCAGGAGATTCACAAGATTGA
Protein Sequence
MSLPSGVDMQNLMSQHPVLGALPPAFFLRAASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCLCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGLLYTSVPSRVSSQNGNENTTTATSSQLSPQQTSANGVFHPGIPSPPSDGIDSTNNSTHHHNRMPFSNGNSGDSDSEMRLRAERLSMGFSPDRTEVESPGSKRARLSNETDQDTGSESAPSSPHPKGYNNNGNLSPARTGPPSSPESDLDVDSAPDEATPENLSLKKEDSTSPPHTPSNESMHMLRTFNNGNAQGFMPYHHTQFLAAAAASAHSHAQHSPHHPQQPQMPPQHPGSATQQRSPVDVLMRVFPNRRRSDVEQLLQRYRGDVLQTMEAMISGEDMLTTTTSSPPNVPPSPPFPLKSAFSPLVPPAAVFGSPTHRYPPFMQAHAKRFLTAPYAGTGYLPGVINPADVEQSESNGGTSVDRNSNAGDSQD