Chom013414.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- Nfat5
- Assembly
- GCA_004302925.1
- Location
- PYHX01000436.1:123436-139553[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.95 4e+03 -2.5 0.7 57 69 79 91 72 139 0.66 2 4 4 1.7e+04 -4.8 2.8 64 70 250 256 232 311 0.58 3 4 1e-36 4.3e-33 114.6 1.5 1 168 361 520 361 521 0.96 4 4 0.38 1.6e+03 -1.2 0.0 45 68 620 643 612 665 0.83
Sequence Information
- Coding Sequence
- ATGCGTACTACCATGTCAACTATGTCCACTATGAGCCCGCGTATTCATCGTAAAGGTTTTCGGACCCCTTCAAAAAGACATCCCGGCAAAGCTTTTCCCGGCAAATTGCATTCAGTTTCAAGaatTGGACCGGGTAAAATGGTGCCAGGTAAACGTTTTCCTATAAGACCGCATCCACCACCCTGTGATAATTCAAATGATAGTGGTTATGGTTTCGATCAACATGTTGAagttcaacaacaacaacaacagcatagCCAGcatcaacatcagcaacaacaaaccaGTAGCCCCAATGCAAGtacaaatttatcaaattcCTCGTCCACCTCCGCCATACATCATCATCAcaccagcagcagcagtagTCATCAGCAACAAAGTTCAATACAAAATAGTCCCAATACAACATCCTTATCAGCAAACAGTCTACATTCTCCCCAACAACATTTGATTAGAGCTATACCTGCCTCCAGATCGAGGCCAGCGAAAAAATTACCCTTTTTAAATGATGATACTGAAAATACCGAATCAGAAGATGAAGATTTCTGTACTGATGATTCCGATGACAATTATGGTGGTCGACAtcgtaaaaatcttaaaataaataatcaacaaacttcatcatcgtcatcatcctCTTCGTCGTCATCGTCTTCGTCCTCGTCATCGTCGTCTTCAACGTCACCCCATTCCGATAAAAATCATCAACATCAAAATCaccatcatcataatcatcaccACAATCaccatcataatcatcatttgGGTCATGGCATTAAACGTAAAAAGATGGAAACCATAGCAGTAGATTTGGAAAATGATGATGCCTGCAGTGAGGATGCTTTCATACGTAAAATAGCCAGTGAGACCAATACAAATACAGTATCGAATATTAATACAAGAGCACCGGCGCAATTACAGGTACAGGCACAACCACACGTCTCCCAAGTAGTAGTCACGCCGGCACCCACAAAATTTATTGCCGCCAGTGCTCGTGGCATGACAAGAGTGGCTCACAAAAGGCAACCTGTAACACCGCCCAACAGTGTGGCCACCTCTTCAGATGGTCGCGTACAATTGGAAATTGTCTCACAACCAGAACAACAACACAGAGCCAgatatCAAACCGAGGGCAGCCGTGGAGCTGTTAAGGATCGTAGTGGCAATGGTTTTCCAATAGTGAGATTGGTAGGCTATAATAAGGCCACTTCTTTACAAGTATTTATTGGCACCGATATTGGTCGTGTTGCTCCACATATGTTTTATCAGGCCTGCAAAGTTGCTGGCAAAAATTCCACGCAATGTAATGAAAAGAAAGTTGATGGTACAGTggttattgaaattgattttaaaccAGAGCAAGATATGACCATAACATGTGATTGCGTGGGaattttaaaggaACGCAATGTCGATGTAGAACATCGTTTTCCTGAACATCTTgcacaaaagaataaaaagaagtCTACAAGGTGTCGCATGGTATTCCGTACACAATTAACACATGATGATGGCACCGTGGAAACACTACAAGTCTGTTCTAATCCCATTATATGCactcaACCTCCGGGTGTAccagaaatttgcaaaaaatcccTTAACTCTTGCCCAGTAGATGGTGGTCtggaattatttataattggTAAAAATTTCCTCAAAGATACGCATGTGATATTTCAAGAAACCTACGATAGTGTCAATCCCAATAATGAAGATGATCTCAAGACAGCAGCAGCCGCTGCCAATGATATGTCAATTATAGGTGGAGCATTATGGGAACAAACAGTGTTGCCTGATAAAGAATATTTACAACAAACCCATTTAATATGCACTGTACCACCGTATATACatcaaaatattatgaaacCCGTTACCGTACAAGTTTCGATTATTTCGAGTGGCAAAAAAAGTGAACCCCATACATTTGTTTATACCCCAAAGGGCACTTATACACCATTGGCGGCTGCAACTACGCTAAGTAGTACAAATACAATACACAATAGCTTATCATCGGTCCAaggtatttatttttgtttatacttattattttatttatattctctttaa
- Protein Sequence
- MRTTMSTMSTMSPRIHRKGFRTPSKRHPGKAFPGKLHSVSRIGPGKMVPGKRFPIRPHPPPCDNSNDSGYGFDQHVEVQQQQQQHSQHQHQQQQTSSPNASTNLSNSSSTSAIHHHHTSSSSSHQQQSSIQNSPNTTSLSANSLHSPQQHLIRAIPASRSRPAKKLPFLNDDTENTESEDEDFCTDDSDDNYGGRHRKNLKINNQQTSSSSSSSSSSSSSSSSSSSSTSPHSDKNHQHQNHHHHNHHHNHHHNHHLGHGIKRKKMETIAVDLENDDACSEDAFIRKIASETNTNTVSNINTRAPAQLQVQAQPHVSQVVVTPAPTKFIAASARGMTRVAHKRQPVTPPNSVATSSDGRVQLEIVSQPEQQHRARYQTEGSRGAVKDRSGNGFPIVRLVGYNKATSLQVFIGTDIGRVAPHMFYQACKVAGKNSTQCNEKKVDGTVVIEIDFKPEQDMTITCDCVGILKERNVDVEHRFPEHLAQKNKKKSTRCRMVFRTQLTHDDGTVETLQVCSNPIICTQPPGVPEICKKSLNSCPVDGGLELFIIGKNFLKDTHVIFQETYDSVNPNNEDDLKTAAAAANDMSIIGGALWEQTVLPDKEYLQQTHLICTVPPYIHQNIMKPVTVQVSIISSGKKSEPHTFVYTPKGTYTPLAAATTLSSTNTIHNSLSSVQGIYFCLYLLFYLYSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01201371;
- 90% Identity
- -
- 80% Identity
- -