Basic Information

Insect: Coccinella septempunctata
Gene Symbol: RREB1
Assembly: GCA_907165205.1
Location: OU015574.1:52645992-52678060[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00098 0.17 13.6 0.8 1 23 83 105 83 105 0.98

2 16 0.00029 0.049 15.3 0.4 1 23 118 140 118 140 0.98

3 16 0.00015 0.025 16.2 5.1 1 23 146 168 146 168 0.97

4 16 3 5.1e+02 2.7 0.1 1 22 227 249 227 251 0.74

5 16 0.00085 0.14 13.8 1.8 2 23 257 279 257 279 0.92

6 16 0.18 30 6.5 3.5 1 20 325 344 325 346 0.93

7 16 0.18 30 6.5 0.1 1 23 475 497 475 497 0.96

8 16 5.8e-06 0.00097 20.7 0.7 1 23 506 528 506 528 0.99

9 16 0.00073 0.12 14.0 3.1 1 23 534 557 534 557 0.97

10 16 0.00043 0.073 14.8 3.0 1 23 955 978 955 978 0.97

11 16 0.00043 0.073 14.8 0.4 2 23 1187 1208 1186 1208 0.97

12 16 0.11 19 7.2 6.3 1 23 1214 1237 1214 1237 0.97

13 16 0.012 2.1 10.2 2.6 1 23 1265 1289 1265 1289 0.96

14 16 0.36 61 5.6 1.4 1 23 1347 1370 1347 1370 0.92

15 16 0.015 2.5 10.0 0.4 3 23 1417 1437 1415 1437 0.93

16 16 0.0071 1.2 10.9 5.7 1 23 1443 1465 1443 1465 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00098	0.17	13.6	0.8	1	23	83	105	83	105	0.98
2	16	0.00029	0.049	15.3	0.4	1	23	118	140	118	140	0.98
3	16	0.00015	0.025	16.2	5.1	1	23	146	168	146	168	0.97
4	16	3	5.1e+02	2.7	0.1	1	22	227	249	227	251	0.74
5	16	0.00085	0.14	13.8	1.8	2	23	257	279	257	279	0.92
6	16	0.18	30	6.5	3.5	1	20	325	344	325	346	0.93
7	16	0.18	30	6.5	0.1	1	23	475	497	475	497	0.96
8	16	5.8e-06	0.00097	20.7	0.7	1	23	506	528	506	528	0.99
9	16	0.00073	0.12	14.0	3.1	1	23	534	557	534	557	0.97
10	16	0.00043	0.073	14.8	3.0	1	23	955	978	955	978	0.97
11	16	0.00043	0.073	14.8	0.4	2	23	1187	1208	1186	1208	0.97
12	16	0.11	19	7.2	6.3	1	23	1214	1237	1214	1237	0.97
13	16	0.012	2.1	10.2	2.6	1	23	1265	1289	1265	1289	0.96
14	16	0.36	61	5.6	1.4	1	23	1347	1370	1347	1370	0.92
15	16	0.015	2.5	10.0	0.4	3	23	1417	1437	1415	1437	0.93
16	16	0.0071	1.2	10.9	5.7	1	23	1443	1465	1443	1465	0.98

Sequence Information

Coding Sequence: ATGCAGGGCGTAGTATTTATGCACCAACAAGGTTCACCACCTCCAAATAATACTTCAGACATGGAAGTATCGCATAGTCCAATGAACTACTCAACCAAAGAAAAGACAGACCAAAGCAACCACGACTCGGGCGTCTTCTCGACGACCAACAACTCAATCTACGAAACCACGGAGAACCACAGCCGCACCACCCAGTCGGAAAACTGCCCCTCCGAGAATGGAAGCGACTGCGGCTCCAACGACAAATTCTCCTGTCCCATATGCGCGACAGTTCTAACCTCCCAACACGAGTTCACGTTGCACATCAAATCCCACAACAGCGACAACGAAACGTGGCAAGACGACAAGGGCTACACCTGCAGGATCTGCTTCAAGGTCCTCAGCTCCAGCTCCAGCCTGGACAGGCACGTCCTGGTGCACAGCGGCGAGAGACCCTTCCATTGCAAATACTGCGGCGACACCTTCACCACCAACGGCAACATGCACAGACACATGCGCGCCCACTCGGTGAAGAACAAGAGCTACGAGTCGGACGGCAGCACCGACAGCAGCGCCAGCAACACCGAGTACAACAACAACAGGGTGAAATCCAAACTGGTCAGGAAACGGAAGCTGGAACAAGACGACGATGAGCTAATCTGCACCAAGAGAACCTTCTCCGGTGACGTTCCCAGGACCTACAGATGCCCGGTTTGCGAAAGAAACGACTTCGACTCTGTGTCCGTGCTGGAGACCCACATGGAAGACAACCACCCCGATTACCCCGCCAAGTGTCACCAGTGCAACAACGTGTTCTCCAACCAGAAACAGCTGGAGGTCCATCGGGCGGCCACTCACGACAACGTGAACCCCAAACATTCCGTCGTCGGTTTCAAAGATCTAACTTTCGTGGACTTCTCCAGCGAGAAGTTTCCCCACATAGCTCGTTACGAGTGCGAGAAGAACCTCCACAAGGGGTCGGGTAGCCTCAAGTTCCAGTGTAAGAAATGCAACCGTTTCTTCCCTTGCTCCAGTTCGCTGGAATACCACGAGAAAGACTGCAAGGAAAGCGTGACCGGTCTGGACCTGTCCTCGCAAAAATTGACGGAAGTGGAAGTCAGAAGAAACGACTTCTTCTCCCGCTTGAATCTCCAAGATGTATCGCCTGAAAAACATATCACTAACAAGAACGAAAACTGCGTAAAGACCGAGTATAAACTGATGCCGGATAACAACAAAGATCTGGCTGATATACAGACCATAATATCCATGACGACTAGTGGCAGTCTGTTGCAACAGCTCCAACACAAGACGAACGAAATGACCAACAGCCTGCAAAAGTCGCACCCGGACATACAGCAGCAAGAATCCTCGAAGAACGAAGAGGAGGAAACTCAAGATGCCTTCGCCGTTGAGTTTCGAAAGATGAAGTTGAAAGGGGAGTTCCCTTGCAGGTTATGCACTGCCATTTTCCCGAACTTACGAGCTTTAAAGGGTCATAACAGAGCCCATCTGAATGGTAACAACAACGGATCGTACCGGTGTAACATGTGCCCACATTCCTCCGTAGACAAAGCTGCTTTGATCCGTCACATGCGAACTCACAACGGTGACAGACCGTACGAATGCTCCCTGTGCAATTACGCCTTCACCACCAAGGCGAACTGCGAGCGTCACCTCAGAAACCGACATGCCAAAACCACGAGGGAGGAGGTGAAGAAGGCCATCATTTACCACCCTTCGGAGGACCCGACGAACGACGAAATGACCAAACTGTCGAACAGGGACGATTCCAGAAAGATACACAATTCTTCCAGCGAGGTTTTCGATAGCGTTCCGGATAAGATACACTGCTCGACTCCGAAATTCGAGAGCAGACCCGAACTGAAACACATCGCTACCCCCGAACGCAACCCTTTACTTTCCAACTTGCAATCGTTGAAGGAGAGTCTGATGGGTAAAGAACCCTTACAGTTGTTCCCGAACATCAACGATGTCATACGTAACGAGAATCTGAAGACGCTGAAGGAGTACAGAAACGGCACCATTCCAGTTCCTCCATACTTGCCACCTTACGGCTTTCAACCTAAACTGAACAACGTTCCGACTCCTCCTACCCCTGGTAAAATCCAGGTGAAAGATCTGAGCGCTTTGAAGATGAACCCTTACGATAACAACTCGGACGAAGAAGATTACGATGACGACGAGGAATCCATCGATGTTGTGCTGGATTTGAGCAAGAAGAAACCAACAGTGGAAGATGCTAAACCAGTCGAAGATACCCCTCAAGATTTATCGGTTAAATCTTCACCACCGCCTTCTCAAGTTGCCCCACCGATGGCTGAAATGCTCCAAGCGAATCTCCTGAAGAGTCCACCCAAGATAGACCCGGCAGCCTTCTACGCGCAATGGGCGTTGCTGAGAAACGGTTTCGCCGGTTTGCCTAGTTGGCCGAGCTTCCCTTTCAATCCTATATTCCTCCAGCAACTCCAGAATCAAGTGCCAACTGCTGCAACGTCGGATATGAAGGATAGACTGAGGAATCAGTTGTGCGGTGGTACCGTGATCGCCGATAACCGTTTGCAGGCCTTGCAGCAGATCAGAAACGCCGGTTTGATACCGATGGCCATGAATAACTTCGGGAATGACGCAAGGCAAGAGGTGGAGAGTTCATATGCGTCCCCGAAAACCACGGAGGATCTGAGCAGACCGCTGAGTCTAACCATCGAGCAAAATATGAACGAAAGTATGTCCAAGATGACCAGTCCGTTACCGCAGGGTAAACCAGATATCTTACAGTCCCCAAACTCGGTGAAAATGGTGATAAAGAACGGGATCTTGATGCCCAAACAGAAGCAGAGGAGGTATAGGACCGAGAGACCTTTCACCTGCGAGCACTGTTCGGCAAGGTTCACCCTACGTTCAAACATGGAACGCCACATCAAACAGCAACACCCCCAATTCTGGTCGCAACGTCAACGCGGCAACATCGGAAACCCCGGTAGAAAATCTCAAGTTTTACCAATGAAACCAGGTTTCTGCGATCTGAGCATCCCCAGCTACGACCTCCAGAAGAATCAGGGTTACGAGGACAACAAAGAGATGCTGAGCGACAGGCTTAAATTCGCCATCTTAGCTCAGCATTTGCGGGGGGTTAACAGTTACACCAACGCCATCAAGAGGGAAGAAGACGAAGAAGACGCTTTGGTCATCGACGAGAACAGCGAGGATAAACCGTCCGATCTTCACGTACCACACGAAGCGTTCCAGAAGGAAGACCATGAGGAGATGGAGAAAGATGATGAGCACACGACCAAGACTGGTAAAACGGAGGAGAGTCAAGACTTGGTACCCGTGTCTAGGCTGTTGGACAACGCGTCCCAGCAACAGTTCAACGAGTATTTCAAGAGGGACGTTGAAGAGAATGGCGCTGGTAGCGAGGAAGACGAAGAAGGGTTGGTGGCGAGTGGGAGTACCAGCGAAGGGAACATTTCTGGGACTGATGAGAATAAATCTGAATCGGAAAATACAGCGCCTGTGAAGAAAAAGTCCGCCTATTCCCTGGCGCCAAACAGAGTAAGCTGCCCTTATTGCAGTCGTAAATTTCCTTGGACATCTTCCCTACGCCGTCACATCCTGACCCACACCGGCCAGAAGCCATTCAAGTGCAGCCACTGCCCCCTGCTCTTCACCACCAAGTCGAATTGCGACAGACATCTATTGAGGAAGCACGGAAACGCCGCCACCACCATAACCAACGACGTGGTCAACAACAACGCCAACTACCTGATGAGGAACGTCCCGGAAAGGCCTTTCAAGTGTTCCAACTGTCCCAGTAGTACCTTCTCCACGTACACCAACCTGAAGAAGCACATCAGTTCGAAACACGCGACCAACGCCCAAGGTGACGACATCAGGGCTCAGGGGTACGAGGCCGGTAGTTCAGAGGACGAAAAAGTCAACGTTTCCGACAACGTAAACGAGTGGAACAGCCAAAATCCCCACACGAAAATGCAAAACCAAGAACCCTTACCGAGTTCCGTGAACGCCGACCAACCGTTCAAATGCCATTTGTGCGAATTTTCCTTCGGGGAACGCCAAGAAGCGTTGGACCACATTAAGGACAAGCACGCCTCCGAATACGACCTGCTGATGTCCAAGAACGCTCTAGACAGCAGCGCCACGACCCCAGAAGAAAGCGCCCACAACGACGAAGAAGACGGCGAGATCAGGGGAAAATTTCCCGACTATTCCAACAGAAAAGTCATCTGCGCATTTTGCATGCGTCGATTCTGGTCGGCGGAAGATCTGAGGAGACACATGAGGACCCACACCGGCGAACGACCGTTCATGTGCGACATCTGCCGACGGAGATTCACACTGAAGCACAGTATGCTGCGCCACAGGAAAAAGCATAACGTGAACTTCGATAACGACGGCGCGATCAACAGCGACGATGACGGAAACGGGGTTTCCCCGAAATACGAGAATGGAAGCAACAAGAGAGCTGAAGATTCCGACGGTGGAAACGAAGGGGGAGATCTCATCAGTAACCTACTCGGAATCCGTCCGTCTTTCATCGATAAAGTGCTGACGGCGTCGGCAGATGACGCTGCTAAGCTTCTAGGAGTTAGGAATGGAGTGAAGGAGTAG
Protein Sequence: MQGVVFMHQQGSPPPNNTSDMEVSHSPMNYSTKEKTDQSNHDSGVFSTTNNSIYETTENHSRTTQSENCPSENGSDCGSNDKFSCPICATVLTSQHEFTLHIKSHNSDNETWQDDKGYTCRICFKVLSSSSSLDRHVLVHSGERPFHCKYCGDTFTTNGNMHRHMRAHSVKNKSYESDGSTDSSASNTEYNNNRVKSKLVRKRKLEQDDDELICTKRTFSGDVPRTYRCPVCERNDFDSVSVLETHMEDNHPDYPAKCHQCNNVFSNQKQLEVHRAATHDNVNPKHSVVGFKDLTFVDFSSEKFPHIARYECEKNLHKGSGSLKFQCKKCNRFFPCSSSLEYHEKDCKESVTGLDLSSQKLTEVEVRRNDFFSRLNLQDVSPEKHITNKNENCVKTEYKLMPDNNKDLADIQTIISMTTSGSLLQQLQHKTNEMTNSLQKSHPDIQQQESSKNEEEETQDAFAVEFRKMKLKGEFPCRLCTAIFPNLRALKGHNRAHLNGNNNGSYRCNMCPHSSVDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKAIIYHPSEDPTNDEMTKLSNRDDSRKIHNSSSEVFDSVPDKIHCSTPKFESRPELKHIATPERNPLLSNLQSLKESLMGKEPLQLFPNINDVIRNENLKTLKEYRNGTIPVPPYLPPYGFQPKLNNVPTPPTPGKIQVKDLSALKMNPYDNNSDEEDYDDDEESIDVVLDLSKKKPTVEDAKPVEDTPQDLSVKSSPPPSQVAPPMAEMLQANLLKSPPKIDPAAFYAQWALLRNGFAGLPSWPSFPFNPIFLQQLQNQVPTAATSDMKDRLRNQLCGGTVIADNRLQALQQIRNAGLIPMAMNNFGNDARQEVESSYASPKTTEDLSRPLSLTIEQNMNESMSKMTSPLPQGKPDILQSPNSVKMVIKNGILMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGNIGNPGRKSQVLPMKPGFCDLSIPSYDLQKNQGYEDNKEMLSDRLKFAILAQHLRGVNSYTNAIKREEDEEDALVIDENSEDKPSDLHVPHEAFQKEDHEEMEKDDEHTTKTGKTEESQDLVPVSRLLDNASQQQFNEYFKRDVEENGAGSEEDEEGLVASGSTSEGNISGTDENKSESENTAPVKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNAATTITNDVVNNNANYLMRNVPERPFKCSNCPSSTFSTYTNLKKHISSKHATNAQGDDIRAQGYEAGSSEDEKVNVSDNVNEWNSQNPHTKMQNQEPLPSSVNADQPFKCHLCEFSFGERQEALDHIKDKHASEYDLLMSKNALDSSATTPEESAHNDEEDGEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFMCDICRRRFTLKHSMLRHRKKHNVNFDNDGAINSDDDGNGVSPKYENGSNKRAEDSDGGNEGGDLISNLLGIRPSFIDKVLTASADDAAKLLGVRNGVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00130772;
90% Identity: -
80% Identity: -