Basic Information

Insect: Coccinella septempunctata
Gene Symbol: -
Assembly: GCA_907165205.1
Location: OU015573.1:69175413-69183231[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 6 1e+03 1.7 0.1 3 11 64 72 62 78 0.56

2 13 0.00042 0.071 14.8 0.1 1 23 283 305 283 305 0.95

3 13 1.5e-05 0.0025 19.4 1.6 1 23 313 335 313 335 0.99

4 13 5.4e-05 0.0091 17.6 0.2 2 23 343 364 342 364 0.96

5 13 2.1e-06 0.00035 22.1 1.2 1 23 370 392 370 392 0.99

6 13 0.00017 0.028 16.1 0.9 1 23 399 421 399 421 0.96

7 13 3.2e-05 0.0053 18.3 1.3 1 23 427 449 427 449 0.96

8 13 2.5e-05 0.0043 18.6 0.1 1 23 455 477 455 477 0.97

9 13 1.9e-06 0.00032 22.2 1.4 1 23 483 506 483 506 0.96

10 13 4e-05 0.0067 18.0 1.8 1 23 512 535 512 535 0.95

11 13 2.5e-06 0.00042 21.8 2.6 1 23 541 563 541 563 0.99

12 13 0.00011 0.018 16.6 0.4 1 23 569 591 569 591 0.94

13 13 0.00089 0.15 13.8 0.1 1 21 597 617 597 621 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	6	1e+03	1.7	0.1	3	11	64	72	62	78	0.56
2	13	0.00042	0.071	14.8	0.1	1	23	283	305	283	305	0.95
3	13	1.5e-05	0.0025	19.4	1.6	1	23	313	335	313	335	0.99
4	13	5.4e-05	0.0091	17.6	0.2	2	23	343	364	342	364	0.96
5	13	2.1e-06	0.00035	22.1	1.2	1	23	370	392	370	392	0.99
6	13	0.00017	0.028	16.1	0.9	1	23	399	421	399	421	0.96
7	13	3.2e-05	0.0053	18.3	1.3	1	23	427	449	427	449	0.96
8	13	2.5e-05	0.0043	18.6	0.1	1	23	455	477	455	477	0.97
9	13	1.9e-06	0.00032	22.2	1.4	1	23	483	506	483	506	0.96
10	13	4e-05	0.0067	18.0	1.8	1	23	512	535	512	535	0.95
11	13	2.5e-06	0.00042	21.8	2.6	1	23	541	563	541	563	0.99
12	13	0.00011	0.018	16.6	0.4	1	23	569	591	569	591	0.94
13	13	0.00089	0.15	13.8	0.1	1	21	597	617	597	621	0.92

Sequence Information

Coding Sequence: ATGTCTGCAGGTTTAATAAACCATAATTCCCTTTGTTTAATATGTAATGGAAGTTGTATTACTTCGAGAAATTCAATACAGATATTCAATGAGGAGACCACAACTTGCTCTGAAAAACCATTGATAGCTATTCTATCCAGAGTTTTGGATAAGGATATCACCGTACAATCTGTACACTCTAAATTGATATGCAAAAAATGTTTCAAATTATTTGATGAACTAGATGAACTGGAAATGAGATGTGATGAGATAAGAGGAGAACTTATAAGGAATTATAAGCTTTCTAGTCAAAAAAATTCTCTAGAAAATTCAGATTTGAAGGAGAGAAGTGAAAATTTATCTGATAAAGGAAAACCACCTTCAGGAAATAATAAAAATTTTTTATCATCAAGGACTTCTCACAAGAATGAGGGTCAGAGCAAACAAAATTTGCCTACAATCGAAGACATCGACGAGGAACTCTTCCAAATACAAAAGGAAAAAGTTGATAATGAGTTAGACCAATCTGATAATTCTGAATCTGACTTTATGCAATTAAGAGATGACGTTATCGATGAGGGAGCTTTAGAACATAGTTCAGATTCGGAATATGATCCATCGTGCATTCAAGACACCTCAGAAGATTTGGAAGAACGTCAGAAAAGTATCACAAGCCAAGATTTGAAGAAACCGAATATATTGAAGAAAGCTGCCTTGGATAATTTGAAACCTGTGAAAGAGGAGTTTGAAGTTATTGTTTCTAGAGATGGTGATGATTACACATGTTCAGTTTGCGAAAATGAGCCGTATGTCGGTGATCGTAAAACTATAATAACGCATATGAAAACGATCCATAATCTCAGGTTGTACATTTGCGATGTTTGCGGTTTAGATTTTAGGAAACGGAATGAATTGTCAGCTCATTTGGATGAACATGTGGAGATGGAAGAAGGCGACTTCCAATGTGAAATTTGCAATAGGATTTTCAGCAATTTGAGGTTATTCAGGATACACAAGAGGATGCACGCGCCCCAGCACAAGGCGTGGGAATGCGAAGAATGCGGAAAGAAATACAGTTCCAAAAATCTCCTCGATGAACACCGTAACATACATTCCGGCGTTCGACCGTATGTTTGTGATAAATGCGGCAAAGACTTCGCCTCTAAGTATACTTTCAAGGCTCACGAAAAAACGCACGAGATCAGACCCCGTCCCTATCTGTGCGGACAGTGCCCCAAAACGTTCCTCAGTCAGCAGAATTTGACGCAGCACGAACGAACCCACCTCGGGATCAAAGAGTATTCCTGTCATCTGTGCGGGAAGCAGTTCGGATCGGCCCATAATCTGGAGGTGCACTCGATAGTCCATACGGGGTACAAGCCGTTCGCCTGCGGCCTGTGCGGGAAGGCGTTCGCCAGGAAGGCCGAGATCAGGGACCACGAAAGGACGCATACCGGAGAGAGGCCTTTCCAGTGTGAGTTCTGCGGTGCGAGGTTCAGCCAGCGCAGCAACCTCCAATCCCACAAGAGGGCCACCCATTACGACGACAAGAGGCACAAATGCGAACAGTGCGGAAAGGCGTTCAAGAGGAGACGTCTTCTGGATTATCACCTGAAGGCCGCCCATACCGGCGAACGACCTTTCAAGTGCAATATCTGCGACGCCACCTTCGTTTATCCGGAACATTTCAAGAAGCATCGCAGGATTCATACCGGTGAGAAACCTTTCTTGTGCGAAGTTTGCGGGAAAGCCTTCAACAGCCGCGATAACAGGAACGCGCACAGGTTCATCCACTCCGACAAGAAGCCCTACGAATGCCTGGTATGCGGCACCGGCTTCATGAGGAAACCCCTCCTCTATCAACACATGCAAGCTCAAGGTCACCTGAACGATACCATAGTGGTCAATCAGCCACGTCTCACCACGGACGACGACCAATTGGTGACGGTCAACGAGGAGGGCGAGATGGAAATAGTCGATCCGAGCGTGAACCCCGAGGACTCCAAGTTGTACATAGCGGAACACATATTGGCCGAGGAGGAGTTGGTGGAGAGGGAGGAAGACGGTCATATAGAGCATATTATTATAGACGGTCAACATATCACTTTTAAAGAGGGCGAGGCAGAGTATGCCACCGGCGATCTGGAAGAAATCATCCAGGGTAGTATTTTATCGGAAGGTGAGACTCAGATAGTTCAAACGGAGGAGGGGCCCATGCAGCTGGTTAAGGTGAGGATACCGGACGAGAATGGGGGCGAGCAGGAGGCCTGGGTCAAGTTGATGTCGGAATAG
Protein Sequence: MSAGLINHNSLCLICNGSCITSRNSIQIFNEETTTCSEKPLIAILSRVLDKDITVQSVHSKLICKKCFKLFDELDELEMRCDEIRGELIRNYKLSSQKNSLENSDLKERSENLSDKGKPPSGNNKNFLSSRTSHKNEGQSKQNLPTIEDIDEELFQIQKEKVDNELDQSDNSESDFMQLRDDVIDEGALEHSSDSEYDPSCIQDTSEDLEERQKSITSQDLKKPNILKKAALDNLKPVKEEFEVIVSRDGDDYTCSVCENEPYVGDRKTIITHMKTIHNLRLYICDVCGLDFRKRNELSAHLDEHVEMEEGDFQCEICNRIFSNLRLFRIHKRMHAPQHKAWECEECGKKYSSKNLLDEHRNIHSGVRPYVCDKCGKDFASKYTFKAHEKTHEIRPRPYLCGQCPKTFLSQQNLTQHERTHLGIKEYSCHLCGKQFGSAHNLEVHSIVHTGYKPFACGLCGKAFARKAEIRDHERTHTGERPFQCEFCGARFSQRSNLQSHKRATHYDDKRHKCEQCGKAFKRRRLLDYHLKAAHTGERPFKCNICDATFVYPEHFKKHRRIHTGEKPFLCEVCGKAFNSRDNRNAHRFIHSDKKPYECLVCGTGFMRKPLLYQHMQAQGHLNDTIVVNQPRLTTDDDQLVTVNEEGEMEIVDPSVNPEDSKLYIAEHILAEEELVEREEDGHIEHIIIDGQHITFKEGEAEYATGDLEEIIQGSILSEGETQIVQTEEGPMQLVKVRIPDENGGEQEAWVKLMSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00020694;
90% Identity: -
80% Identity: -