Adec001554.1
Basic Information
- Insect
- Adalia decempunctata
- Gene Symbol
- -
- Assembly
- GCA_951802165.1
- Location
- OX637695.1:16977738-16985199[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.41 54 5.7 0.1 2 16 59 73 58 75 0.77 2 14 5.2 6.9e+02 2.3 1.1 1 23 252 277 252 277 0.85 3 14 0.00044 0.059 15.1 0.1 1 23 282 304 282 304 0.97 4 14 3.4e-05 0.0045 18.6 1.6 1 23 312 334 312 334 0.99 5 14 6.8e-05 0.0091 17.6 0.2 2 23 342 363 341 363 0.96 6 14 2.5e-06 0.00034 22.1 1.2 1 23 369 391 369 391 0.99 7 14 0.00021 0.028 16.1 0.9 1 23 398 420 398 420 0.96 8 14 4e-05 0.0053 18.3 1.3 1 23 426 448 426 448 0.96 9 14 3.2e-05 0.0042 18.6 0.1 1 23 454 476 454 476 0.97 10 14 2.4e-06 0.00032 22.2 1.4 1 23 482 505 482 505 0.96 11 14 2.2e-05 0.0029 19.2 1.3 1 23 511 534 511 534 0.95 12 14 3.1e-06 0.00042 21.8 2.6 1 23 540 562 540 562 0.99 13 14 0.00014 0.018 16.6 0.4 1 23 568 590 568 590 0.94 14 14 0.026 3.5 9.5 0.1 1 21 596 616 596 620 0.92
Sequence Information
- Coding Sequence
- ATGTCTGTAAACAATTCTCTGTGCCTAATTTGTAATGGAAGTTGTATCACTGCGAGAAACTCAATACATATCTTCAATGAGGAGaccATCACTTGTTCAGAAAAACCGCTGGTTGCTATTTTATCAAGAGTATTGGATAAAGACATCACAGAATACTCTGTACACTCAAAATTGATGtgtaaaaaatgtttcaaatcatTTGATGAGCTGGATGAACTTGAAATGAGATGCAACGAAATGAAAGGAGATCTTATTCGCAATTATAAACTTTCGAGTTTTAAAAACTCTGGTGATTTTACAGATCCAAAAGAAAAACATGAGATCAAAGTTAAGGGTGCTAGACAAAATTCGAATATGATCAAAAAGAACATGTCATTTAAAGCTACTCATCAAAGTGAGGGTCACAATAAACAGAATTTGCCAACTATTGAAGATATTGATGAAGAACTGTTTCAAATACAGAAAGAAAAGAGTGAAAATGAGGTTGTAGAACTTTCAGATAATACAGAAGCAGAGTATATTGAAATGAGGGACAACGAAGTAATCGATACAGGGGCATTAGAGCATAGTTCAGATTCAGATTATGAACCTTCTTATGTACAAGTAATTACCGAAGGTCAGGAGGAAGTTCGAAAAGATATAACGAATCAGGATAGTTCTAAAAAACCCAATATTTTGAAGAAGAATGTGCAGGAAGATATCAACATAGTCAAAGAAGAATTTGACCTCATTGTTTCAAAAGATGGTAACGATTACACATGTTTGATATGCGATGGTGATCCAGTTGTTGGAGATCGCAAAACTATGACAGATCACATGAAAACTAGTCATGACCTCAAAGTGTACATCTGTGATGTTTGCGGCTTGGATtttagaaaaagaaatgaactGTCGATTCATCTAGATGTGCATGTAGAGATGGAAGAAGGTGACTTCCAATGTGAAGTATGCAACAGGATTTTCAGCAATTTGAGGCTGTTCAGGATACATAAAAGGATGCATGCGCCACAACACAAAGCGTGGGAGTGTGAAGAGTGTGGCAAAAAATACAGCTCTAAAAATCTACTTGATGAACATCGAAACATTCATTCTGGAGTTAGACCTTATGTGTGCGAAAAATGTGGTAAAGATTTTGCCTCTAAATACACTTTCAAGGCTCACGAAAAGACGCACGAGATCAGGCCCAGACCCTACCTCTGCGGTCAGTGCCCAAAGACGTTTCTGAGTCAGCAGAATTTGACTCAGCACGAACGAACGCACCTCGGTATAAAAGAgtattcctgtcacctctgcgGGAAGCAGTTTGGATCTGCCCACAATCTTGAGGTGCATTCTATCGTTCACACGGGGTACAAACCGTTCGCCTGCGGACTATGTGGCAAAGCGTTCGCTAGGAAGGCCGAGATAAGAGACCACGAGAGGACGCATACCGGAGAAAGACCTTTCCAGTGCGAGTTCTGTGGCGCGCGGTTCAGCCAACGTAGCAATCTTCAATCACACAAGCGAGCGACTCATTACGATGACAAAAGACACAAATGTGAAGAGTGCGGAAAAGCCTTCAAACGAAGACGACTATTGGACTATCACCTGAAGGCTGCCCATACAGgcgaaagacctttcaaatgcaACATCTGCGATGCTACCTTTGTCTATCCTGAGCATTTCAAGAAGCATCGAAGAATACACACAGGTGAAAAGCCTTTCTTGTGCGAAGTTTGCGGTAAAGCGTTCAACAGCCGCGACAACAGGAACGCGCACAGATTCATCCACTCCGACAAGAAGCCGTACGAATGTTTGGTATGCAGTGCCGGTTTCATGAGGAAACCCCTCCTCTATCAGCACATGCAGGCTCAAGGCCACTTGAACGACACCATAGTGGTGAATCAGCCACGCCTCACGACCGACGATGACCAATTGGTGACCGTGAACGACGAAGGCGAAATGGAGATCGTGGATCCGAACGTGAATCCCGAAGACTCGAAGTTATACATAGCCGAACATATTTTGACGGAAGAAGAGTTGGCGGAAAGGGACGAGGGTGGACACATAGAACATATAATAATCGATGGTCAACACATAACCTTCAAAGAGGGAGAGGCCGAATATATGGCGGGCGAATACGAAGAAATTATACAGAGCGGTATATTGTCGGATGGCGAGACGCAAATTGTACAGACTGATGAGGGACCCATGCAACTTGTTAAGGTTAGGATACCTGATGAGAATGGAGGGGAGCAAGAAGCTTGGGTTAAGTTGATGCCGGAATAG
- Protein Sequence
- MSVNNSLCLICNGSCITARNSIHIFNEETITCSEKPLVAILSRVLDKDITEYSVHSKLMCKKCFKSFDELDELEMRCNEMKGDLIRNYKLSSFKNSGDFTDPKEKHEIKVKGARQNSNMIKKNMSFKATHQSEGHNKQNLPTIEDIDEELFQIQKEKSENEVVELSDNTEAEYIEMRDNEVIDTGALEHSSDSDYEPSYVQVITEGQEEVRKDITNQDSSKKPNILKKNVQEDINIVKEEFDLIVSKDGNDYTCLICDGDPVVGDRKTMTDHMKTSHDLKVYICDVCGLDFRKRNELSIHLDVHVEMEEGDFQCEVCNRIFSNLRLFRIHKRMHAPQHKAWECEECGKKYSSKNLLDEHRNIHSGVRPYVCEKCGKDFASKYTFKAHEKTHEIRPRPYLCGQCPKTFLSQQNLTQHERTHLGIKEYSCHLCGKQFGSAHNLEVHSIVHTGYKPFACGLCGKAFARKAEIRDHERTHTGERPFQCEFCGARFSQRSNLQSHKRATHYDDKRHKCEECGKAFKRRRLLDYHLKAAHTGERPFKCNICDATFVYPEHFKKHRRIHTGEKPFLCEVCGKAFNSRDNRNAHRFIHSDKKPYECLVCSAGFMRKPLLYQHMQAQGHLNDTIVVNQPRLTTDDDQLVTVNDEGEMEIVDPNVNPEDSKLYIAEHILTEEELAERDEGGHIEHIIIDGQHITFKEGEAEYMAGEYEEIIQSGILSDGETQIVQTDEGPMQLVKVRIPDENGGEQEAWVKLMPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01024278; iTF_00349432; iTF_00764923; iTF_00130732;
- 90% Identity
- -
- 80% Identity
- -