Basic Information

Gene Symbol
Baz2b
Assembly
GCA_907165205.1
Location
OU015574.1:52464359-52500341[+]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-10 1.1e-06 29.4 0.0 4 51 675 724 673 733 0.90
2 2 0.012 1e+02 3.8 0.0 50 73 745 767 739 771 0.90

Sequence Information

Coding Sequence
ATGGATAAAGAGAATGGAAAGAGTAGCGAAGGTAACTCAGGCTCCAATAAACATTCTAACCAATCGGATCCGGCCTCTCTGCTCGATGCAGCCAGCTTATTTGGAGCTTACTGGCCCCGAGGAGATGCAGCAGCGGCCGCCAACCTGTTCGCGGCTGGAGGCGGTTTCGGCATTCCCCAGCATCCGGCGGCTGCCGCGGCCGCCGCATCCGGCATGCCCTTCGGCCTCATGCCGCCCAGTTCGCCGGGAGGCAGGGGCGCGATGCCCAACTTCCCGACCTCGTCGGTGGCGGCGGCATACAGCAACGCGTACACCAACACGCTGTCGGTCGCGGCCAGTCAAGCGGCTAGCCTCGGCATACCGGCTGCAAGTGCAGCATGGTGGTCGATGGCCTCCCACCTGGCGGCCCAGGACTACCTCGCCCGCCTCCAGGCGTCCGGCCTGAACTTCCCCTCGTTGGCGGACCCCTACGCCTCCCTGGCCGGCCTACCCTCCCTCTCCGGCTCCTCGCACCACGGCCAGGGCAAGTCGAAGAACTCCAAGGGCGGCTCCAAGTCGCACGGCAACGCCAAAGACAAATCCTCGCCCTTCTCGCACCACCACCAGCAGCAGCAGCGATCCTCGCCCTCGCTGAAGATGAGCTCTAGTCCGGCGCCGACGTCGTCGAAGGCCTCCTCCAAGAACTCCCCCGGCCTGACCATCCAGCCCGCCTCCGCCGGGCGCTACCAGCAGCAGCAGGAGAAGAAGGCGTCCAAGTCGGCTGCGTCCGCGCTGAACGACATGACCTACAACATGAAGCAGCTGGAGAAGCTGAAGAACAGCGGCAACAACGTGAGCATCAGCTCGAGCGATTCGATGGGAGGGAAGATGTCGACGTCGTCGAGCATCTTCAGCAGTCCGATGAACATGGTGAGCGGGTCGGATAAGGGCGCCGTGACGTCGGCGGTGTCGAGCGCCAATTCGATCAGCAGCGTCGGCTTGCCTTCCAGTATTTTAAGCGATCCAAATTCGATACTAGGCGGCGTTCGCCTACCTCCAGATACAGAAATAATCAAATATACCTCATCGATAGTCGGCCCTAAGGTACCCGGTACCACCAACCGAGGTAGAAAAAAGACAATATCTCTAGATCCTCCCTTGGTGAGCGTTCATCCCTCAACTTCCCTGGACAGATCCAACAAACGACTGAAATTGAACGATTCTCAAGAGGACCATCAGCAAATGAACTCGCACGATAGAATAGAACTGATAAAACTGCCACCGACCAACGGCAGTCCTTCGGGTATGTCGGGATCGCCGTACAGCAGCAATAACGGCTCGGAGTCGACGGGGGAAGCCCCGCTCAATCTGTCCCTCAAATCGTCGACGCCTACCTCGTGCAGCACGAATCCATCCCTCAACTCCCTGAGCAACATGTCGGCCAGCATAGGCATGGACAGAGTTTCGCGAAGGAAGCCCGGCCCGAAACCCAGACGGGTGATACCGGCGGCGTCCCAGCCGCCGCCCGCGACGCCCAGCTCCTCCCTGATCCAGATGTTCGCGTCCGCCGATTCCCCGCGACCTCCGAGTCGCAACGAGGGTTCCGACGGCGGCAGTTCCACCTCGTCGACGTCGGCCACGGCCGCGAACGCGGGCGGCTCCTCCTCCTCCAACCACAAGGAGGGCAGACCGAGGAACCTGGGTAGGGGCGTGAGCAAGCCGAAGAAGAACACCGTGGCTTCCCTCCTGGCTCAGAGCAGGGCTTTAGGGATAAAGCCCATGCCCATGTTGGACCCTAACACTTCGATGAACCAGCAGCTCAGCTACCTGAAATCGAACATACTGGCCGCGCAGCAGTACATCAACGAGGCCGGCGGCGACGAGAAGATGTTCAACAAGCTGCTCCAGGAAAAGTTCAAGGGTACCCTGAGCGATTCCAGCACGGTGGACGCTTCCACTGACTCGGACAACATGTCCGATTCCAATCACACCGATTCGGAGATGGAGGTCGAGCTGCCGGTCAAGAAGCAGAAGCAGTACGACGAGAGGGCGCTGCGCGTGCCGCTGGAGTTAGGTTGGAAACGTGAAACTGTGATCAGGGGACTGACCAAAAACGGCGGTTTGAAAGGCGACGTTACTTACTCGGCACCCGAGTGCTCCAATAAATTCAAACAAATGTCAGATGTCACTCAGGTAAGTGGTATGATCGCGGATCATGGATGGATTTTGGAACCTAACGAAACGGTATTTTCTGCGCAGTATCTAGATAGTCAGAACATCACGGAATTATCCAGAGAAAACTTCACCTTCAGCTGTAGGGTTATCCTGGGCAACTACCTCCAACCCATGCCTCCCGAGATGGCTGTGGATAGCGAATATGTCCAACTGACCGAAGAGGATGTCACAAAAAGATTGGAGGAGTTAAAATCGGCCATGAGAACAAACCTGTCGGTAGAACAACGAATAGAATTGGCCAGGAAACAACAGGCCGTCAGGGCAGCTGCTAGGTTGGATAGGGAGCAGGCCAGGATAGCCAAGGAGATCGAGAGGTCCGAGCGTCAGGAGGCCGCCAGGAGGGACAGGGAGATACGATCTCAACAAATGATGGAGGCTAAGAGAAAACGTCAAGAGGAAATGGAGAGACAGAAACAGGAAGAACAGCAAAGGAAACAACAGGAACGGGAACGGCGAAGACAGCACATGGCCCTTGTGAAATCGCTGGAGAGCAGGAGGAAACTGGAGGAGAGGGAGAAGAAGAAACAGCAACTGCTGGCCGAGAAACAGGCCAACAAGGAGAAGAAGATGGAGCAGAGGCGGATGGAGATGGAGATCTTGAGCGAACTGAGGAAACCCTGCGAAGACCTGGAACTGGACCAGAAGCCTCTGCCGGAACTGGAGAGGATACCCGGATTGAAACTACCCGGGCAGGCTTTCGGGAACGTCCTCATGGTGTTCGAGTTTCTGCACAACTTCGGGGAGACCCTGGGCTTTGACATGGACTCCCTGCCCACCCTGGACTCCCTCCAGCAGGCGCTGATGCCCAACGAACACTCTTTCGAGGCGGAAGAAGAACTGTTCTCGATCATGACCCATCTGCTGGTCTGCGCCATCGAAGATCCGGGTATTCCTAACCCGGCCAGACACACCACCATCCTGGGACAGAGCCTGAGACAGGCGGACATAACCCACGTCAACCTCTCGGAGATCCTGAGGATATATCTTTACGCGAACGCGACGGGGGAGGTTAAGGCCCTGACGGGGGTGCATTTCGAGAGGGAGCGCGAGAAGAGGATAGCCGACCACCATCAGAACGACGACGAGATGCAGGTCACGCAGCAGGGCAAGAACTCGCAGTACTACGAGATCCTGCACGACAACGAGACGTGGAAGCTGTCCAACATGCTCAAGGACAAACCCTTCATGGCCCTATCGCCGACCCGGAAGTCCGAGATACTGGCCTACATATGCAACGAGCTGCTCCAGAACAAGGCGGTGATCCGGCAGATCGAGGGTTCGCTGGAGCAGGTGGCCCAGCTGAAGAAGGAGAAGTGGCTGTTGGATAACAAGATCAGAAAGTTGAAATTGTTGCATGGGAAGAAGGTCAGGTCGGAGGCCGTGGAGAAGGTGCATAAGATTGGGGATATGGACGGTTCAGAGTCGGCGGTGGACTCCCCGTCTTTGCATAAAGATGACCTATTGGACGACGAGGACAACGAGATGAGCGACAACGAGAGTCTTGCCACCCAACCCGAAGAGGAGGAAGACGCCAAGCTGAGCGGCGAAGAGCTCGGCAAGAAACTGGAGAAACTGATAAAAACGTCGGAGAGCCAACTCCAAGCCCTGAACATCTCCACCCAACAGCTGAGGGCCACCTGCTTCGGCCAGGACAGGTTCTGGAGGCGGTACTGGCACTTCCCCAAGGCGGGCGGCATCTACGTCGAAGCCATGGAGTCCGCCGAGCCAGACCTCCTCCAGCAGATCTCCGACGAGGAGAGCAAGACGCACGACATAATCGACACCGCTCACCTGGTCGACTGCCAGGAGAGGACGGAAGAGGCTCGGCTATGCGACGAAGAAAACGACGAGAACGAACACAGGAAGACGCCGAACAGATTGGAGAGCGTGGAGAACGGCAACGCGCTGCCGGACGGGGACGACAACAACCTGGTGGAGTTGCAGAAGAGCGTGGACGACGTCGTCCAGAGCTTGGAGAAGGAGCGGGAGATGAAACGGGAGGAAGAGGAGGAACCGTTGAGCAGCAGGAAGTTCAACCTGTTCGAGAAGCTGGGCCAGTGCATGGAGAGGGAGAACAAGACGGAGGAGGATCTCAGGGCCGACGTCAAGGCCGAGGTGAAGGAGGAGCTCAAGAACGAGATACTGAACGAGCTCAAGTGCGAGATAAAGACGGAGTGTGTGAAGGACGAGGAGGACGCCAAGGGGGAGACGGAGACCAAGTGGTTCAGCGTGCTGAGCAGGGAGGGCACTTGCGAGGAGGTGCATCTGACGGCTGGCAACAAGTGGGACAACGGCGCCGTCACCAGGGACAACGTGACCGAACTGAAGATACCGGTGTTTCCGCATCCGAACTCGGCGGCAGGGGGCGGCGGTTCCGCGTCCTCCGGCTATACGAACGCGGAGAACTGCGACAATCTGCCGCCGCTGCTGATAACGGCGGAGGAGAGCGCCCAGCTGGAGTACATCAAGAAGCACGGCATGCCGAAGTCTTGCCCGAAGAAGAGCGTGCCGGTGGAGAAGCGGTACGGTTGGTGGAAGGTCACGAAGATCGACGAGTTAAAAGAAATCCTGGAGAACTTGCACGTCCGCGGCATACGCGAAAGGGAACTGAAGAGAAATTTCAACAGTATCATGCAAGCGATGTATCCCACGCTGAGGATACACATAGAAGAGGGTAACAAGGAATTGACGGAGCTGTCCACGGAACACATCGACGACGTCATGTTCATGGAAGGCGGGGCGCCGTATCCCGATCAGAAGGACGCCTGGAACAAGGCCATCGCGGAGAGAGTGGACGCGTCTCTGCTAGAACAGGTAGAAGCTCTCGAGGAGAAAGTGGCCAACGCCAGTATGCAGGTGAAGGGGTGGAAACCGCCGGGCAGGGACGGCCCACCCGTACCCCCCGAATACATGATATACACCATCAGGGAGCGACTGGCCTCGTTGGAATTGAACATCGAAAGGAGATACCTCAAGCCACCGCTGGGAGTCAACACCGGCGATCCCAACCTGGCGGCGATCGCTCAAGAGACCACGGGCGCCTCGTCGTCGACGTCGTCGTCCCAGCCGCCCACCCCGGGCGTGGACGACATACCGAAGGGTCTGGCAACGTGGCGCGAGGCCCTCAACCGTAGCCAGACCTCGGCGCAGCTCGCGATGTGCCAATATTCCTTGGAGGCGTCCATCGCGTGGGACAAGAGCATCATGAAAGCTAACTGTCAATTCTGCCATAGTGGGGACAATGAGGACAAACTGTTACTTTGCGACGGTTGTGATCGAGGTTATCACACCTATTGCTTCAAACCCAAGATGGAAAACATTCCAGAGGGAGATTGGTACTGTCACGAATGCATGAATAAGGCTACAGGTGAGAGGAACTGTATCGTGTGTGGTAAAAAACAGGCCACGACCGGTACGAAACTCGTGCTTTGCGATCTGTGCCCGCGCGCCTACCATCTGGACTGTCTGCAGCCGCCCATAACGAAGATCCCCCGCGGTAAATGGTACTGCCTCAATTGCATCTCGAAGAAACCCCAGAAGAAGGTCAAGAAGAACAATAACAAGACGCCGAAAGAAGCTGAATCGACTGAACATCCTCCTCCACCTAGCCCTGCCCCGTCTCACAGCTCCGTGGCGACGAACGAAGACCAGTCGACGATAACGAACTGCAACCAGAGCGACATCTCCAACTCCAGCATGTGCAACACCATGTCGCCGTCTTCCCAAACGCCCAAAAAAGACAGGCAGTCCAAGAAATTGATAAAGGAACTGGCCCCCTGCAAGGCGATCCTGGAAGATCTAGAGTGCCACGACGACGCTTGGCCTTTCTTGTTGCCAGTCAACACCAAACAATTCCCCACGTATAAGAAGATAATAAAGACCCCGATGGACCTGTCCACCATCAAGAAAAGGTTGCAGGATATGTACTATAAGAGCAAGGAGGAGTTTATCGCGGACGTGAGACAGATATTCAACAATTGCGAAATATTCAACGAGGACGACAGTCCGGTAGGTAAGGCCGGCCACATGATGAGGCAGTTCTTCGAGGCCCGTTGGAACGAGATGTGTCTGAACCACAGTTGA
Protein Sequence
MDKENGKSSEGNSGSNKHSNQSDPASLLDAASLFGAYWPRGDAAAAANLFAAGGGFGIPQHPAAAAAAASGMPFGLMPPSSPGGRGAMPNFPTSSVAAAYSNAYTNTLSVAASQAASLGIPAASAAWWSMASHLAAQDYLARLQASGLNFPSLADPYASLAGLPSLSGSSHHGQGKSKNSKGGSKSHGNAKDKSSPFSHHHQQQQRSSPSLKMSSSPAPTSSKASSKNSPGLTIQPASAGRYQQQQEKKASKSAASALNDMTYNMKQLEKLKNSGNNVSISSSDSMGGKMSTSSSIFSSPMNMVSGSDKGAVTSAVSSANSISSVGLPSSILSDPNSILGGVRLPPDTEIIKYTSSIVGPKVPGTTNRGRKKTISLDPPLVSVHPSTSLDRSNKRLKLNDSQEDHQQMNSHDRIELIKLPPTNGSPSGMSGSPYSSNNGSESTGEAPLNLSLKSSTPTSCSTNPSLNSLSNMSASIGMDRVSRRKPGPKPRRVIPAASQPPPATPSSSLIQMFASADSPRPPSRNEGSDGGSSTSSTSATAANAGGSSSSNHKEGRPRNLGRGVSKPKKNTVASLLAQSRALGIKPMPMLDPNTSMNQQLSYLKSNILAAQQYINEAGGDEKMFNKLLQEKFKGTLSDSSTVDASTDSDNMSDSNHTDSEMEVELPVKKQKQYDERALRVPLELGWKRETVIRGLTKNGGLKGDVTYSAPECSNKFKQMSDVTQVSGMIADHGWILEPNETVFSAQYLDSQNITELSRENFTFSCRVILGNYLQPMPPEMAVDSEYVQLTEEDVTKRLEELKSAMRTNLSVEQRIELARKQQAVRAAARLDREQARIAKEIERSERQEAARRDREIRSQQMMEAKRKRQEEMERQKQEEQQRKQQERERRRQHMALVKSLESRRKLEEREKKKQQLLAEKQANKEKKMEQRRMEMEILSELRKPCEDLELDQKPLPELERIPGLKLPGQAFGNVLMVFEFLHNFGETLGFDMDSLPTLDSLQQALMPNEHSFEAEEELFSIMTHLLVCAIEDPGIPNPARHTTILGQSLRQADITHVNLSEILRIYLYANATGEVKALTGVHFEREREKRIADHHQNDDEMQVTQQGKNSQYYEILHDNETWKLSNMLKDKPFMALSPTRKSEILAYICNELLQNKAVIRQIEGSLEQVAQLKKEKWLLDNKIRKLKLLHGKKVRSEAVEKVHKIGDMDGSESAVDSPSLHKDDLLDDEDNEMSDNESLATQPEEEEDAKLSGEELGKKLEKLIKTSESQLQALNISTQQLRATCFGQDRFWRRYWHFPKAGGIYVEAMESAEPDLLQQISDEESKTHDIIDTAHLVDCQERTEEARLCDEENDENEHRKTPNRLESVENGNALPDGDDNNLVELQKSVDDVVQSLEKEREMKREEEEEPLSSRKFNLFEKLGQCMERENKTEEDLRADVKAEVKEELKNEILNELKCEIKTECVKDEEDAKGETETKWFSVLSREGTCEEVHLTAGNKWDNGAVTRDNVTELKIPVFPHPNSAAGGGGSASSGYTNAENCDNLPPLLITAEESAQLEYIKKHGMPKSCPKKSVPVEKRYGWWKVTKIDELKEILENLHVRGIRERELKRNFNSIMQAMYPTLRIHIEEGNKELTELSTEHIDDVMFMEGGAPYPDQKDAWNKAIAERVDASLLEQVEALEEKVANASMQVKGWKPPGRDGPPVPPEYMIYTIRERLASLELNIERRYLKPPLGVNTGDPNLAAIAQETTGASSSTSSSQPPTPGVDDIPKGLATWREALNRSQTSAQLAMCQYSLEASIAWDKSIMKANCQFCHSGDNEDKLLLCDGCDRGYHTYCFKPKMENIPEGDWYCHECMNKATGERNCIVCGKKQATTGTKLVLCDLCPRAYHLDCLQPPITKIPRGKWYCLNCISKKPQKKVKKNNNKTPKEAESTEHPPPPSPAPSHSSVATNEDQSTITNCNQSDISNSSMCNTMSPSSQTPKKDRQSKKLIKELAPCKAILEDLECHDDAWPFLLPVNTKQFPTYKKIIKTPMDLSTIKKRLQDMYYKSKEEFIADVRQIFNNCEIFNEDDSPVGKAGHMMRQFFEARWNEMCLNHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-