Csep026023.1
Basic Information
- Insect
- Coccinella septempunctata
- Gene Symbol
- TFIP11
- Assembly
- GCA_907165205.1
- Location
- OU015577.1:8210060-8216646[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.5e-63 2.1e-58 199.4 16.5 93 275 9 188 1 188 0.96 2 3 0.033 7e+02 0.8 0.1 243 271 201 229 192 239 0.63 3 3 0.47 1e+04 -3.0 0.0 157 187 276 310 266 315 0.77
Sequence Information
- Coding Sequence
- ATGCATGATATTCACCTCATATTCATTGACCATCTTTATTCCAGTACATGGAATCCGAGAGATTGCGATAATTTGATCAGTTTACTTGAGTTATGGACTCCTCTTCTCCCTCAATGGATACTGCAGAATATGTATAATGAATTAATAGTACCTAGATTGAAGGATGAAGTCGATTCTTGGGACCCAATGACTGATACGGTACCTATTCATACCTGGATTCATCCTTGGATACCACTAATTGAACCCAAGCTACAAGAACTGATCTATCCAATAATCCAAAAAAAATTAGGAGCAGCTCTAACTAATTGGCATCCATCAGATCGTTCAGCGAAATTTATGTTACAACCATGGAAGCGAGCTCTTCCTGAAGGAGTTTTCGTCGCTTTTCTCATAAAACACATAGTACCGAAATTACAATTGTGCATGCAGTCACTTGTGATAAGTCCACTTGAGCAACATCTAGATAACTGGCATTGGGTCATGGATTGGAGTGACATGATATCTGTTGGTAACATGACGCTAATTTTGGACAAATTCTTTTTTCCTAGATGGCTTCAAACATTGGCTTTATGGTTAAATCACGATCCAAACTATACTCAGGTTACAGAATGGTATTCTGGATGGAAAAGGATGCTCTCTGACGAACTTTTAGCCCAACCCACAATCAAAGAAAACTTCCACAAAGCGTTGGAAATGATGAATAGGGCTGTAAAATTGGAACAACAACCTGGAGCTAAAGAATCTATATCATATTTGACTACACTAGAAACCAATGTACCTCCACCACCACCTCCTCCAAAAGTTGAAAGTTTTGCAGAAGTGATAAGAATTACTTCGCAAATACCACAAGGGTTCAAAGATCTAGTCGCAAAACGATGCGAAGAAAGGGGGATTCTGTTTGTACCCATAACAAATAAATTTCGAGAAGCGAAGCAAGTTTATAGGATGGGTACTAATGGTGTCCAGTGCTATATTGATAGAAATGTAATATTTTATTCAAGCAATAATTCTACCTGGCTACCAATATCCTTGAATAGATTATTAGATTTAGCATGA
- Protein Sequence
- MHDIHLIFIDHLYSSTWNPRDCDNLISLLELWTPLLPQWILQNMYNELIVPRLKDEVDSWDPMTDTVPIHTWIHPWIPLIEPKLQELIYPIIQKKLGAALTNWHPSDRSAKFMLQPWKRALPEGVFVAFLIKHIVPKLQLCMQSLVISPLEQHLDNWHWVMDWSDMISVGNMTLILDKFFFPRWLQTLALWLNHDPNYTQVTEWYSGWKRMLSDELLAQPTIKENFHKALEMMNRAVKLEQQPGAKESISYLTTLETNVPPPPPPPKVESFAEVIRITSQIPQGFKDLVAKRCEERGILFVPITNKFREAKQVYRMGTNGVQCYIDRNVIFYSSNNSTWLPISLNRLLDLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -