Csep029695.1
Basic Information
- Insect
- Coccinella septempunctata
- Gene Symbol
- -
- Assembly
- GCA_907165205.1
- Location
- OU015580.1:4176744-4181185[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-07 0.00017 22.2 0.0 10 66 15 75 9 83 0.70 2 2 0.16 1.3e+02 2.9 1.3 63 200 114 249 105 267 0.63
Sequence Information
- Coding Sequence
- ATGAAGTTAACTAATGATTGGTACGAGAAGCTGATGGAACGCCGGCGGGAGCAGGAAAAACAGTTGAGAGCCAGGATGCAAGAAAATACGGGAGGTACACCACTAGTGCTTCCCCCCCTCTTCGGAAATCCAGTTAAGGTTCCTACAAATAAGAATGACCCGTTGGTGAAAAGAATTAACGGCGTACTGGGAGAGTATAGCAGGGCCAAGCATTTATTCGATGGGAAGAAGGTCTTGATCCAGCCTGGTTTCACCACTCTATATGCGGTGCAACCGAGAACACACATGCCACCCCATCAGCCAGCAAACAGGGAATTAAATGTAGAATTCACAAGACCCTTACTGACATTGAGATCCAGGCACGAGTTGATGAAGAAAAATAACCACCACCATCCTGGCTTTCATTTTATGCCCGAGAAGAAACCGATTCAACACAGGCCAGTCGACAGCAGGCCACACGAAAGCGGCCCTTTTCAGGGCCACCAGGTCAGGCAAATCAACAAAAACAACTACGAACATAGCGGAAACGGCGCATATCAACAAATGATGCGTCGTCCTATGGCCATGGGTCGTCCTACTGCTTATCGAATGACCCGTCCAGCCGGCCCCGTATCGAACCAACAAAGGCCCTTCGACATCAGACCCCACGAACGCGGCCCTTATCAGGGCCACAAGAATAGGCAAATTAACTACAACTATGCCGCCTACAAACAGAAAGTAAATGGTCTATCTCCACTAATAATGCGTCGTCCTATGACCATGGGTGATCCTAGTCATAATCAAGTGAGGCGTACAGCCGTTCCTGTACCGGTAAGTATGAAACACCAGTTCTTCTAA
- Protein Sequence
- MKLTNDWYEKLMERRREQEKQLRARMQENTGGTPLVLPPLFGNPVKVPTNKNDPLVKRINGVLGEYSRAKHLFDGKKVLIQPGFTTLYAVQPRTHMPPHQPANRELNVEFTRPLLTLRSRHELMKKNNHHHPGFHFMPEKKPIQHRPVDSRPHESGPFQGHQVRQINKNNYEHSGNGAYQQMMRRPMAMGRPTAYRMTRPAGPVSNQQRPFDIRPHERGPYQGHKNRQINYNYAAYKQKVNGLSPLIMRRPMTMGDPSHNQVRRTAVPVPVSMKHQFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00349087;
- 90% Identity
- -
- 80% Identity
- -