Csep027851.1
Basic Information
- Insect
- Coccinella septempunctata
- Gene Symbol
- -
- Assembly
- GCA_907165205.1
- Location
- OU015580.1:3647116-3658284[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-08 1.8e-05 25.5 1.5 10 124 15 141 9 275 0.64
Sequence Information
- Coding Sequence
- ATGAAGTTAACTAATGATTGGTACGAGAAGCTGATGGAACGCCGGCGGGAGCAGGAAAAACAGTTGAGAGCCTGGATGCAAGAAAATACGGGAGGTACACCACTAGTGCTTCCCCCCCTCTTCGGAAATCCAGTTAAGGTTCCTACAAATAAGAATGACCCGTTGGTGAAAAGAATTAACGGCGTACTGGGAGAGTATAGCAGGGCCAAGCATTTATTCGATGGGAAGAAGGTCTTGATCCAGCCTGGTTTCACCACTCTATATGCGGTGCAACCGAGAACACACATGCCACCCCATCAGCCAGCAAACAGACCAACTTCTGTTGAAGCCAGGCACGAGTTGATGAAGAAAAATAACCACCACCATCCTGGCTTTCATTTTATGCCCGAGAAGAAACCGATTCAACACAGGCCAGTCGACAGCAGGCCACACGAAAGCGGCCCTTTTCAGGGCCACCAGGTCAGGCAAATCAACAAAAACAACTACGAACATAGCGGAAACGGCGCATATCAACAAATGATGCGTCGTCCTATGGCCATGGGTCGTCCTACTGCTTATCGAATGACCCGTCCAGCCGGCCCCGTATCGAACCAACAAAGGCCCTTCGACATCAGACCCCACGAACGCGGCCCTTATCAGGGCCACAAGAATAGGCAAATTAACTACAACTATGCCGCCTACAAACAGAAAGTAAATGGTCTATCTCCACTAATAATGCGTCGTCCTATGACCATGGGTGATCCTAGTCATAATCAAGTGAGGCGTACAGCCGTTCCTGTACCGGACAGAAAAACTCTACTTCACCAGAGTCCAGCTTCCTCGAACTTCGAAGTAGACAGGGCTCTGAAGGAAATGATCATTATGAAAGCAAAATTTTCGCCTATTGTTCCCATTTCGGGGTTGGATATTAACAAAAAAAAATTTATCTTCCATCATCCTAAAGCAACGCTATCAGAGATGCCCCTTTGTAAAGGTTCCTCTACCCCGAGGCAGAACACGAACAACTATAGGAAAAGGCTCCATGAGGAATTCTGCAACGCCTACCCAAATATAAATGTCACTGAACAACGGGTGGCAGACCAGTACCGCGTAATTCTGAGAAATGAACTAATACCAATGGCCAGAATCGACGCAATTAAACAAGAACTTCAGCGTCCGCCAGTAACAGAGAGCGACACCAACATCTCTGATGAGATTCACATGCCTGGGCAACAACAGCCAGAAGAAATTGACGCTGAAAGTCCATCTTGCAACCCAAGTGAGGCAGAACACTAG
- Protein Sequence
- MKLTNDWYEKLMERRREQEKQLRAWMQENTGGTPLVLPPLFGNPVKVPTNKNDPLVKRINGVLGEYSRAKHLFDGKKVLIQPGFTTLYAVQPRTHMPPHQPANRPTSVEARHELMKKNNHHHPGFHFMPEKKPIQHRPVDSRPHESGPFQGHQVRQINKNNYEHSGNGAYQQMMRRPMAMGRPTAYRMTRPAGPVSNQQRPFDIRPHERGPYQGHKNRQINYNYAAYKQKVNGLSPLIMRRPMTMGDPSHNQVRRTAVPVPDRKTLLHQSPASSNFEVDRALKEMIIMKAKFSPIVPISGLDINKKKFIFHHPKATLSEMPLCKGSSTPRQNTNNYRKRLHEEFCNAYPNINVTEQRVADQYRVILRNELIPMARIDAIKQELQRPPVTESDTNISDEIHMPGQQQPEEIDAESPSCNPSEAEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00349090; iTF_00349086;
- 90% Identity
- iTF_00349089; iTF_00349092; iTF_00349063; iTF_00349095; iTF_00349096; iTF_00349097; iTF_00349066; iTF_00349098; iTF_00349067; iTF_00349068; iTF_00349100; iTF_00349069; iTF_00349101; iTF_00349070; iTF_00349102; iTF_00349071; iTF_00349103; iTF_00349104; iTF_00349073; iTF_00349074; iTF_00349075; iTF_00349107; iTF_00349076; iTF_00349108; iTF_00349077; iTF_00349109; iTF_00349078; iTF_00349079; iTF_00349112; iTF_00349081; iTF_00349113; iTF_00349082; iTF_00349083; iTF_00349084; iTF_00349087; iTF_00349111; iTF_00349080; iTF_00349086;
- 80% Identity
- -