Cfuc010733.1
Basic Information
- Insect
- Coboldia fuscipes
- Gene Symbol
- lrrfip2
- Assembly
- GCA_001014335.1
- Location
- JXOR01000040.1:71242-87295[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.12 1.4e+03 -2.3 0.5 41 79 194 232 158 251 0.58 2 3 5.8e-109 6.8e-105 350.0 33.1 1 299 273 560 273 561 0.93 3 3 0.15 1.8e+03 -2.7 4.4 216 245 586 614 565 634 0.50
Sequence Information
- Coding Sequence
- ATGGATAACGAACAGACATCACATACAGCAGCAGTTCAATTAATGAACCGTAACCACATAAATGATAGTggtaaacaaaataaattgaatgatctGACTCTTTATCATCACTATGATGAATGcgatgaattgaattcaagttCTGGTGATTTTCAGGAGGCAATGTGCACAACACCCAGTGAAtctgattcaattgaaacaaatattgaatgcTCTGATAATAGTAATTACTGGGATTGTTCAAATGGATTTGATAAGGCTGATAAAAGTGAATCGTCATCCACAAACCAAGACACATTATCAATATCGTCAAAGAATTGTATTGGAATTTTTGGTGAAATGGAATCAGACAATGGTATTATAAGTGCACCACCTTCAACTATTGATGGTGATAAtgtgaatgtgaatttaaatgaatttgaaacgGCTGATGGATTTGAGCACCTGGATAACTTGGATAACATTAACATTGAACAGTTAGAGTCAGTTGATCAAAGTACGGTGATGGAATACAATAGTGTTGTAGAAgcaactaataaaaatttaagtgaaatgtTTTCgcataaagaaataaatggaaagaaaaatcaaaccCTTGATgggaatttaaatgaaactgttaATTTATCAGTGGTAAATACATCTCAAAATctaaattcaacaacaaatgaaTCTGGGAATACAAGTGAGCTGGTCGATTTACAAAATACTGATCCTGATGGTGTACAATATGAGTCCGAAACGGATGATTATACAGACGAATATTCGGAGGATGAATACAAATTAGTGAACTTTTTAAGCAAAGCTAGAGAAATAgCAGAAGCAAGGCTGGCGGCACGAAGACAAGCACGTGCAGAAGCACGAGAAATTCGAATGAAAGAATTGGAACGACAGCAGAAGGAGCAGGAACAAAATGCTGATCGTGTATTCGATATGCAATCAGCAGCTGGTATTGATCCAATTGCTAAGACAAGAATGGGTTTGACGGGGTCAACGAGTGCCTATCATCGAGGAAATTCTTTATCATCACGGCGCAGCAGTGAGGATTCACTGGAAGAGGAGGGTCGTAGTCTTCGTGATATTCGACATGAGTTGAAGGATGTTGAAGAACGTTTTCGTAAAGCCATGATAGCAAATGCTCAATTAGACAATGAACGAGCATCACAATCGTATCAAATCCAATTATTAAAGGATAAACTAGAAGAAATGGAAGAAACACATGCTCAACTTCAACGAGAACATAGAGAAAAATGTCGTGATCATGATGCATTAAAACGTAACAATGACAAGTTGTCTGAAGAGTTAAGACTGTACCAGGGACAACTGAATGAACGGGACACATTAATTGCTGAACAAGGTTTAACCATAGTGATTATAGAGAATGAGGATGGTACAGATGCACGCCGTGCTCTAGTCAGTGTCGAGAACGCTCAATTATTGGATAGTGTACAGGGTTCATTAGATGTACGGcttaagaaattcaatgaagaaaAGCAACAACTGGAAAATGAGGTTCAACAGTTACagcaaaaattattagaaacaAAGAAACCCGGTTGGCGTTCAAATTCAGTAAATGGCCCTGTCGGTGATGAAGATTATGAGGACGCACAACGTgaagcaaataaattaatagctgattttaaatataaattacaaaaggCTGAACAGGAGATAGCTAGTTTACAGGCCAGTTTAGCACGTTCAGAGACGCAAGTGATCCGATACAAAAGTACAGCGGAAGCAGCAGAAAAAGCTGAAGCTGAACTGAAAATTGAACGTCGTAAACTACAGCGAGAgaaTCGTGAGGCGTTAGAACGACTAGAGGAGTTAGAAAcatcaaataatcatttattgaaaCGATTAGATAAATTAAAGAATGCAAAAAGTGCATTATTAAAGGATCTCTGA
- Protein Sequence
- MDNEQTSHTAAVQLMNRNHINDSGKQNKLNDLTLYHHYDECDELNSSSGDFQEAMCTTPSESDSIETNIECSDNSNYWDCSNGFDKADKSESSSTNQDTLSISSKNCIGIFGEMESDNGIISAPPSTIDGDNVNVNLNEFETADGFEHLDNLDNINIEQLESVDQSTVMEYNSVVEATNKNLSEMFSHKEINGKKNQTLDGNLNETVNLSVVNTSQNLNSTTNESGNTSELVDLQNTDPDGVQYESETDDYTDEYSEDEYKLVNFLSKAREIAEARLAARRQARAEAREIRMKELERQQKEQEQNADRVFDMQSAAGIDPIAKTRMGLTGSTSAYHRGNSLSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEETHAQLQREHREKCRDHDALKRNNDKLSEELRLYQGQLNERDTLIAEQGLTIVIIENEDGTDARRALVSVENAQLLDSVQGSLDVRLKKFNEEKQQLENEVQQLQQKLLETKKPGWRSNSVNGPVGDEDYEDAQREANKLIADFKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREALERLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -