Cmed056620.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- GATA4
- Assembly
- GCA_014851415.1
- Location
- ctg164:696649-704431[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-17 2.2e-13 49.4 3.3 1 35 458 491 458 492 0.97 2 2 6.9e-18 1.6e-14 53.0 7.5 1 35 519 552 519 553 0.97
Sequence Information
- Coding Sequence
- ATGGAGACTGTAACGTCCATGGGCCGTGTAGTGAGTGAGGAGCAACGAGGAGAGGAGGAGCCGACCGCTGAGGCTCTGCAGCTAGTCAAAAGTGAGGAACGGGTGGAGCAGGAGCAGGCCGAGGCGGCGGGCGCGGCCGGCGAGCAGGCCGCCGCGGAGCTGGGCGCGGGCGTCGGCAGCCGCGACGCCTCGCCGCACGCGCAGTCCGTGATCACGTCGCGCCGCGCCGTGCGCACCATCACCGCCGCCGGACACATCACCACGGACCCCGGGGACATGCCGCCCGACGACAGCGTCAAGGACGAGCCGCCGGAGACTGCGCAAATGGAACACGATCACCAGCAGATGCAGCAGTATGCGACCAAACTAGAGGATGGCTCGGACGGGCGCGACGGACCCCAGCAGCATTACGATGAGGAGCGGTTGCGACTAGCCGAGGCTGAGACGGCTCGATACCTCGCCTTCAAGCAGGAGCCTATGCTCGCGCCCCACAGCGACCACCGTACTGGGCGCGGTATATCCCTCCGGTACGGGGCACCACATCACGTCATAGTTGCACAGGAAGGTGAAACAGAGGAGCACGCTCATGATGCATTTCTAGCACATAAGGACAAGGAGCAGCTGCAAGTGTACGCGACAGCAGGCGACGGGAGCGCCAACGGGTCGGACGGCCGGCAGTACGCCGCCGTGCTCGGGGACCAGGCAGCGGCGTCGACCGCGTTAGAAATGATTCAAACGACGTCGCTAAGTAACCAGCAGGCGGTCGGAGTTGCATATCAGCAAGTGAAATACGAAACGAGAGGTGAGGGCGAGCCGAGGCCAACCACGTACGCGAGTCTCCAGCCGGTGACGTCGGTGCACGGCAGCTACGCGTACGCCGGGCAGAGCCCGCAGTACGGCAGCGCGGGGTACAGCGCGTACGCCGGCGGCGGCAAGGAGCTGCTGACGCTGTACGGCGGCGGCGCGCCGGGGCCCAGCGCCGCGGCGCGGGGGGACGAGTCCCCGCCGGGGCAGCTCATGTACCGCACAGACCCTACGCTGTCGTCGTCGTCGTTGACAGCGCGAGGGGCGCACGTCGTCTACGGATCTGTTGTGCCGCAAACACAAGCCGTGTATGAAGCACCCCCAAGTCCCAATTCACAGCAGGTGACGCTATACACGCACGGCAACACGGTGCAGTACAAGGTGGGCGGCGAGCACTACCTGGGCCAGGGCGGCGGCGTGGAGTACGGCACGGTGGTGGCGGGCTACGAGGGCGGGCTGCTGGTGGAGGGCTACGCCGGGCCCGGCCAGGCCTGGCCCGCGCACAACTTGCTGCCCATGGATGATGGGTTCGACCCCGCGATGGCCGGCATGGGCGAGGTGAAGGAGTGCGTGAACTGCGCGGCGGCCACGACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACGCGCATCAACGGCGTGAACAGGCCCCCGCTCAAGGGGCAGAAGGCCAAACCGCAGCAGGCACTGCCGACGAACGGCAACCGGCGCGTGGGCGTGACGTGCGCCAACTGCCGCACCTCCAACACCACGCTGTGGCGGCGCAACAACAACGGCGAGCCCGTCTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAACGTGAACCGGCCGCTGAGCATGAAGAAGGACGGCATCCAGACGCGCAAGCGCAAGCCCAAGAGCATGGGCGGGCACGGCGGCGTGGCGCGGCCCGGCGGCGGCGCGCTCTCGGTGGAGGCTCACCACAGGGTGCTGCCTCCGCTGTACGCGGCGGTGGAGGCGGGCGCGGGCGCGGGCGCGGGAGCGGGAGCGGGCGCGGGAGCGGGCCCGCTGCTGCTGGTGCCCGCCGCGCGCCACCAGCCCGACATCTTTAAGGCTACTGGATTACTTTGTGACGATGCAGTTTTGTCCGTTGGAAATTGCCAAATCATCCTTTTGAATAATTGCAATTTGAATTGCAACATCAAATGTATAACGATACCCAGTAAGATTAGATACGTGCTCTACAAAGGTGGCTGA
- Protein Sequence
- METVTSMGRVVSEEQRGEEEPTAEALQLVKSEERVEQEQAEAAGAAGEQAAAELGAGVGSRDASPHAQSVITSRRAVRTITAAGHITTDPGDMPPDDSVKDEPPETAQMEHDHQQMQQYATKLEDGSDGRDGPQQHYDEERLRLAEAETARYLAFKQEPMLAPHSDHRTGRGISLRYGAPHHVIVAQEGETEEHAHDAFLAHKDKEQLQVYATAGDGSANGSDGRQYAAVLGDQAAASTALEMIQTTSLSNQQAVGVAYQQVKYETRGEGEPRPTTYASLQPVTSVHGSYAYAGQSPQYGSAGYSAYAGGGKELLTLYGGGAPGPSAAARGDESPPGQLMYRTDPTLSSSSLTARGAHVVYGSVVPQTQAVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGGGVEYGTVVAGYEGGLLVEGYAGPGQAWPAHNLLPMDDGFDPAMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGHGGVARPGGGALSVEAHHRVLPPLYAAVEAGAGAGAGAGAGAGAGPLLLVPAARHQPDIFKATGLLCDDAVLSVGNCQIILLNNCNLNCNIKCITIPSKIRYVLYKGG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00752609; iTF_01503496; iTF_01504388; iTF_01072110; iTF_00961498; iTF_00077157; iTF_01280965; iTF_01281882; iTF_01282971; iTF_00408949; iTF_00076118;
- 90% Identity
- -
- 80% Identity
- -