Basic Information

Gene Symbol
pnr
Assembly
GCA_963576865.1
Location
OY756390.1:24538533-24543546[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-16 5.3e-13 49.4 3.3 1 35 477 510 477 511 0.97
2 2 8.6e-18 3.8e-14 53.1 7.5 1 35 538 571 538 572 0.97

Sequence Information

Coding Sequence
ATGGAGACAGTAACATCGATGGGACGCGTAGTAAACGAGGAGACAAGAGAGGAGGAGCCGACCCAGGAAGCGTTGCAACTAGTCAAAAGTGAGGAAAGAGTAGAACAAGAACAGGCGATAGATGCCACCAACGCGGCGAGCGAGCAAGCGGCTGCAGAAATGAACTCTAACGCCACCAGTCGAGATTCGTCTCCACACCCACACTCACAGTCGGTGATTACTTCGAGACGCGCGGTTCGCACCATCACTGCCGCTGGACATATCACTACAGAAACCGGAGAGCACGCACATGATGAGGGAGTGAAAGACGAGCCGCCCGAAACATCACACATGGAACACGAGCATCAACAGCAGCTACATCAGTACGCGCCTAAACTGGAAGAATCCGACGGGCGTGAAGTCTCGCAGCAACACTATGATGAGGAAAGGTTGCGGTTAGCGGAAGCTGAAACGGCACGATATCTGGCTTTCAAACAGGAGCCTTACAGAACGTTACCATCGCCAGCTCCCGCGGACAAGCGCCTCCCGCCGCAGTATGCGCGCGCTCCGCAGCGACCTCCCTACGGGCGAGGTCTCGCGCTTCGTTATGGCGCACCTCACCACGTTATTGTTGCACAAGAAGGTGAATCGGAGGAGCACGGACATGAGGCCTTTTTGGCACACAAAGACAAAGCAGAACAGATGCAAGTGTATGCAACAAGTGCTGAGGGTGCGAACGGTCCAGGGGATGGACGACAATACGCGGCTGTGTTGAGTGATCAGGTGGCTGCGTCAACGGCTTTGGAAATGATTCAGACGACGTCGCTTAGTAATCAGCAGTCTGTGGGAGTCGCGTATCAGCAAGTGAAGTATGAGACGAGAGGTGAGGGAGACCCGAGACCTACGACGTACGCGAGCTTGCAGCCCGTGACATCAGTTCACGGCGGTTACGCGTATGCGGGACAAAGTCCTCAGTACGGAAGTGCGGGGTACAGCTCGTACgcgggaggcggtaaagagttacTGACGTTATATGGCGGAGGCGCGCCGGGGCCGAGTACAGCGGCGCGCGGTGACGAGTCTCCACCAGGACAGCTAATGTACCGAAGTGATCCGACGCTATCTTCCTCTTCGTTGACAGCAAGAGGGGCACACGTCGTGTATGGCTCAGTAGTGCCACAGTCACAAACTGTGTATGAAGCACCTCCTAGTCCAAACTCTCAGCAGGTGACGCTATATACGCACGGCAACACGGTGCAGTACAAAGTGGGCGGCGAGCACTACCTAGGCCAGGGCGGCGGCGTGGAGTACGTGCCGGTGTCGGGCTACGAGAGCGGCCTGCTGGTGGAGGGCTACGCGGCACCGGCGCAGGCGTGGCCGACACACAACTTGCTGCCTATCGACGACGGGTTCGACCCAGCGATGGCCGGCATGGGCGAGGTGAAGGAGTGCGTGAACTGCGCGGCCGCGACGACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGGCTCTACACGCGCATCAACGGCGTCAACCGGCCGCCGCTCAAGGGGCAGAAGGCGAAGCCGCAGCAGGCGCTGCCGACGAACGGCAACCGGCGCGTGGGCGTCACCTGCGCCAACTGCCGCACCTCCAACACCACGCTGTGGCGGCGCAACAACAACGGCGAGCCCGTGTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAACGTGAACCGGCCGCTAAGCATGAAGAAGGACGGGATCCAGACGCGCAAGCGCAAGCCCAAGAGCATGGGCGGCGGGCACGGCGGCGTGGCGCGgccgggcggcggcgcgctctCCGTGGAGGCACACTCGCACAAGGTGCTGCCTCCGCTGTACGCGGCGGTCGAggcgggcggcgggggcggcgcggCCGCAGGGGCCCCCCTACTGCTGCTCCCCTCTGTGCGCCATCAAGCCGATATGGTATCAGCGCTAGAACGCGGCGCGCCGACGCACTACCGCCCGCCGTAA
Protein Sequence
METVTSMGRVVNEETREEEPTQEALQLVKSEERVEQEQAIDATNAASEQAAAEMNSNATSRDSSPHPHSQSVITSRRAVRTITAAGHITTETGEHAHDEGVKDEPPETSHMEHEHQQQLHQYAPKLEESDGREVSQQHYDEERLRLAEAETARYLAFKQEPYRTLPSPAPADKRLPPQYARAPQRPPYGRGLALRYGAPHHVIVAQEGESEEHGHEAFLAHKDKAEQMQVYATSAEGANGPGDGRQYAAVLSDQVAASTALEMIQTTSLSNQQSVGVAYQQVKYETRGEGDPRPTTYASLQPVTSVHGGYAYAGQSPQYGSAGYSSYAGGGKELLTLYGGGAPGPSTAARGDESPPGQLMYRSDPTLSSSSLTARGAHVVYGSVVPQSQTVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGGGVEYVPVSGYESGLLVEGYAAPAQAWPTHNLLPIDDGFDPAMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGGVARPGGGALSVEAHSHKVLPPLYAAVEAGGGGGAAAGAPLLLLPSVRHQADMVSALERGAPTHYRPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00347872;
90% Identity
iTF_01280965;
80% Identity
-