Cmed069580.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cnaphalocrocis medinalis
Gene Symbol
egg
Assembly
GCA_014851415.1
Location
ctg905:58210-99536[-]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.12 3.2e+02 0.8 0.0 17 38 1202 1237 1194 1240 0.85
2 2 9.5e-15 2.5e-11 42.9 0.0 4 75 1269 1333 1266 1335 0.90

Sequence Information

Coding Sequence
CCATCAGAAGATGCATCAAAGCCTAAACATAAGTTTAGTCTAGAAATCTTCAGTCTGGACTCGGATGAAGAAGATGCTGCGCCAGAAAAGAAAGAGTTGACACCGGAAGAGTTAGAAAAAGCGTCAGAAACGAACAAATGTGTGAACATAGCATGCGAGTCGACGGGCAACGTGACCTACTACCCCGCAGACCAGGCCGCTGTCGCGTACTACGACGCGGCGAGAAAGAGAAAGGCTATGGTGTGCGAGCGATGCGCCGAAGCTGTTGTGATTAGGACTAAGAGACTCGTGGATGGTATAAAGGAGTTAACCCCGCTTCTAGAACTGGATATAGGCAAGGTTTCCTCCGAGTTGGTGGAGATATCCGATTCTGACTCCGAAGGAGAGGCCGTAGAGAAGGACGGCAATAAGGAGCTCATTGGAGAGAGTGGGGCAGCTTTCATAGAAAGAGAGTTGGCGAAGACGATAAACGAGACGTGGCTGAAGTTTAAGATGGACGAGCGGCTCACTGAAGCTGAAGACGAGCTCGGCAAGGAGCTGAAGAGACTGGAAGAGGAAACGAAAGAGATAGACACACTGCTGAGCGAGTGTCAGGTGGCGACAGACAAGCTGCGCAACGACCTGTACGCGACCTTCGAGCACGAGCGGCACGAGCTGCACAACCTCGTCATATACGACACGCCCACCAATAAGTACACATGCTTAGAGGCATCGGCTCCAGCCCAGACAGTCGAACAGAAGACTTCTCCTGCCGAGACCCGATCAAAACGACGAGCGTCTTCGGCCATGGAGAGTGCGGCCAAAAGACCGGCTATACCGCTGGGGTACGCTCCACTAGACCCCGACAAGTCTGCCACAGCCCAGGAATCCAAACCCGAGTCTACAGTTGATTCATCGAAACTGGATGATGATAAGGACATATCAGTCCTAAAAGTGTCAGTGGAGGCGGCGCCTCGCGACCTGCCTCCAGCAGGCGAGCTGGTACGCCCCCCGCTCCGCGCAGACATGTGCGTGTACGCCATGCGGAACACCTTCGGCTCCTGGGTGCGGGCGAAACTGCTGGACGTGCAGGGGAAGAACACTGTGCCTGGGTCCTCGCACACTTTCACGATATGCCGCGTGAAGCTGTTCTCTCGCAACCAGACGAAGACCAAGTTGTACCCCGCCAGATGTCTGGCGTACCCCGAGCCGGCCGACGTGAGGATGACTATAGGCACCCGTGTGATAGCGCTGTTCAAGGACCCCATGAACGAGATGAAGCGAGACACTTTCTACTCGGGCATCGTGGCCGAGGTGCCCAACCCCGTCAACAGCTACAGATACCTAGTATTCTTCGACGACGGCTACGCGCAGTACTCGATCACCGGCGACACGCGGCCGGTGTGCGAGTGCTCCCCGCTCGTGTGGGAGAGGGTGCACCCGTTCTCCGCGCGAGTTCGTGAGGAAGTACCTCGTGGCCTACCCCGAGCGGCCCATGTACGTGCGCCACCGCGACACGCGGCCGGTGTGCGAGTGCTCCCCGCTCGTGTGGGAGGAGGTGCATACCGTTTCTCGCGCGAGTTCGTGAGGAGTAACCTCGTGGCCTACCCCGAGCGGCCCATGGTGCGCCTGCACGCCGGCCAGAGCCTCAAGACCGAGTGGAACGGCAAATGGTGGACATCCCGGGTGATCCAAGTGGACGCGTCGCTGGTGCAAGTGCACTTCGAGGAGGACAACCGCACGGAGTGGATCTACCGCGGGTCCACGCGCCTCGCGCCGCTGTACCTGGAGCTGCAGGCTGCTGAGAGACATCGGGCCAGGCCTATGCCCCGGACTAAGGCTCAGGCCAGGGAGGTGCAAGCCACAGAGAATCATCGGGCCAGGCGTATGCCCCGGACTAAGGTTCAAGCCAGGGTAAGAACATCTTTAAGCCCTAGGAGGTGCAAGCTGCAGATGCATATAGAAAGGGGCCAAGCCTATGCCAAGGAGCAAGGGTCAGACCAGGGTGCAAGCCGCAGGGAATCATCGAGCCAGGCCTATGCCCCGGACCAAGGCTCAGGCCAGGCGTGCAAGACATCCCGGGTGATCCAAGTGGACGCGTCGCTGGTGCAAGTGCACTTCGAGGAGGACAACCGCACGGAGTGGATCTACCGCGGGTCCACGCGCCTCGCGCCGCTGTACCTGGAGCTGCAGGCTGCTGAGAGACATCGGGCCAGGCCTATGCCCCGGACCAAGGCTCAGGCCAGGGAGGTGCAAGCCACAGAGACTCATCGGGCCAGGCTTATGCCTAGGACTAAGACTCAAGCCAGGGAGGAGCAAGCCGCAGAAAGGGATATAGAGAGGATAGGAGCCAAACCTATGCCCCGGATCAAGGCTCAGACCAGGGTGCTTGGCGTGGCCTTAAAGATTTCTTCTCGTGTCGATGGCATTGGCCTTAAAGATGCAGACGGAAGAAAAGCCATGACTCAGACCAGGGTAAATTCTTCTTTGATAACACCGAAAGATCAGCTAGAATCAGGCCAGGCGTGCAAGTCATCCCGGGTGATCCAGGTGGACGCGTCGCTGGTGCAAGTGCACTTCGAGGAGGACAACCGCACGGAGTGGATCTACCGCGGGTCCACGCGCCTCGCGCCGCTGTACCTGGAGCTGCAGGCTGCTGAGAGACACCGGGCCAGGCCTATGCCCCGGACCAAGGCTCAGGCCAGGGTGCAAGCCGCAGAGAATCATCGGGCTATGCCTATGCCTAGGACTAAGGCTGAGGCCAGGGAGGAGCAAGCCGCAGAGAATCATCGGGCCAGGCCTATGCCCCGGACTAAGGCTCAGGCCAGGGTAAGATCATCTGTACCTGGAGCTGCAGGCGGCCGGGAGGCACCGGGCCAGGCCTATGCCCCGGACCAAGGCTCAGGCCAGGAGACTCATCGGGCCAAGCCTATGCCCCGGACTAAGGTTCAAACCAGGATGCTTGGCGTGGCCTTAAAGATTTCTTCTCGTGTCGATGGCATTGGCCTTAAAGATGCAGACGGAAGAAAAGCCATGGTAAGATATCTGCATCGTAGCGTGCAAGTCATCCCGGGTGATCCAAGTGGACGCGTCGCTGGTGCAAGTGCACTTCGAGGAGGACAACCGCACGGAGTGGATCTACCGCGGGTCCACGCGCCTCGCGCCGCTGTACCTGGAGCTGCAGGCGGCCGGGAGGCACCGGGCCAGGCCTATGCCCCGGACCAAGGCTCAGGCCAGGGTAATATCATCTGTACCTGGAGCCGCAGGCGGCCGGGAGGCACCGGGCCAGGCCTATGCCCCGGACCAAGGCTCAGGCCAGGGAGGTGCAAGCCGCAGAGGCATATAGAAAGGGGCCAAGCCTATGCCAAGGATCAAGGGTCAGACCAGGAGACTCATCGGGCCAGGACTATGCCCCGGACTAAGGCTCAGGCCAGGGCTCAGGCCAGGGTAAGATCATCGCTGTACCTGGAGCTGCAGGCGGCCGGGAGGCACCGGGCCAGGCCTATGCCCCGGACTAAGGCTCAGTCCAGGGTGAACATGCCATACGTGGAGTACACGCGCTCGGAGGAGCAGAACAAGTCAGAACAGGCGCCCGCGCCGCAACCCACCATCACGGCTCTTGAGCGCGAGGTGCGTCAGCGCGCCGTGGCCCGCAAGTCCACGGCGGCGCCCGCGCAGCCGGCGCATGCCGCGCCCGACGCCGTCACCAGCAGGGTCGTGTATTACACCCCCAAGAATGCGGTGAAACCATACAAGATGGCGACGCACAACTGTGGGCCGCATTGCAAGAGGAAGGATACACTGGCCTTAAAGGATCTGAGGACGTACAACCCGCTGGCGAAACCCCTACTTAGTGGCTGGGAGAGACAAATAGTCCGTTTCAACGGGCACAAAGAAGTGATGTACCGCGCTCCCTGCGGCCGCCGCCTCCGCAACATGCGCGAGCTCCACAGATACCTTCGCCTCACCGACAACGACATGCCCGTCGACCTGTTCGACTTCACGCCGCACACGCACTGCTTGGCTGAATTCGTGCTCAATAAGTGTCTGGTGGGGAAGAAGGACCTCTCGCACGGCAAAGAGAACGTACCAGTCCCATGCGTGAACTACTACGACGAGTCGCTGCCGGAGTTCTGCTCGTACAACACGGAGCGCACGCCCACCGCCGGCGTGCCGCTCAACCTGGACCCCGAGTTCCTGTGCGGCTGCGACTGTACCGACGACTGCGAGGTGAGGCGACTGCCACTCAGAGACGTTAATTATCTCTCCCACGGCGAAGAGAACGTGCCCGTCCCATGCGTGAACTACTACGACGAGTCGCTGCCGGAGTTCTGCTCGTACAACACGGAGCGCACGCCCACCGCCGGCGTGCCGCTCAACCTGGACCCCGAGTTCCTGTGCGGCTGCGACTGTACCGACGACTGCGAGGACAAAAGCAAGTGCGCCTGCTGGAAGATGACGCTAGAGGGCGCTCGCACCATCGGCCTCCGCGGCGTCAACGTGGGCTACGTGTACAAGCGCCTGCCCGAGCCGCTGCCCTCCGGCATCTACGAGTGCAACTCCAGATGTAAATGTAAGCAGACCTGCCTAAACAGAGTGGCGCAGCATCCTCTACAGTTTAAAACTTCAGGAACAACAACAGCCTTTGACATAATAAAGTACTTACAAGATAGGACAAAATCACATGTGTTCAAGACGCTGAACCGCGGGTGGGGCATCCGCGCGCTGAACGACGTGCCGCGCGGGTCCTTCCTGTGCGTGTACGCAGGCAACCTGCTCACCGACGCCACCGCCAACATGGACGGCCTCAACGAAGGAGACGAGTACCTAGCCGAGCTGGACTACATCGAGGTGGTGGAGCAGATGAAGGAAGGCTACGAGGAGGACATCCCCGAGGCCGACAAGAAGCTAGATAAGAAATCGAAAGCAAATCTCGAAGAACCTGAGACGTCCAGTTCTGAGGAAGAGGAGGCGCCGTCAAAAGATGAAAAGGAAGATGGTGACTTCCAGCCTGGGGTCATGATTGGAATGGGGGTCACGGAGTTCAGTAAACGATTAAGAAAAAGAGACAAAATAAAGAAGGAGAAAGGGGACGGTGCGAAGGAGACAGATAATCAGGAGAAGAAAGACGGCGATAAAGCTGATGAAGACTGCATCACCATCAGTGATGATGAAGAGGTTCGAGAGCCTTCAAGGTTCATGGCAGAAGCAGGGATGGAGTCAAATGAATTTGTGTCAAAGTATAGGTCTGTTCGTTCGCATTTCGGCAAAGATGAAGCTTGTTACATTATGGACGCTAAGGTTCAAGGGAACATAGGCAGATATCTCAATCACTCGTGTATGCCAAACGTATTCGTACAAAACGTGTTCGTGGATACCCACGACCCGCGGTTCCCGTGGGTGGCTTTCTTCGCGCTGTCGCACATCAAGGCAGGCACTGAGCTCACGTGGAACTACAATTATGACGTGGGTTCGGTGCCCGGGAAGGCGTTGTACTGTTACTGTGGCGCGCCCAATTGTAGGGGGCGGTTGTTGTAA
Protein Sequence
PSEDASKPKHKFSLEIFSLDSDEEDAAPEKKELTPEELEKASETNKCVNIACESTGNVTYYPADQAAVAYYDAARKRKAMVCERCAEAVVIRTKRLVDGIKELTPLLELDIGKVSSELVEISDSDSEGEAVEKDGNKELIGESGAAFIERELAKTINETWLKFKMDERLTEAEDELGKELKRLEEETKEIDTLLSECQVATDKLRNDLYATFEHERHELHNLVIYDTPTNKYTCLEASAPAQTVEQKTSPAETRSKRRASSAMESAAKRPAIPLGYAPLDPDKSATAQESKPESTVDSSKLDDDKDISVLKVSVEAAPRDLPPAGELVRPPLRADMCVYAMRNTFGSWVRAKLLDVQGKNTVPGSSHTFTICRVKLFSRNQTKTKLYPARCLAYPEPADVRMTIGTRVIALFKDPMNEMKRDTFYSGIVAEVPNPVNSYRYLVFFDDGYAQYSITGDTRPVCECSPLVWERVHPFSARVREEVPRGLPRAAHVRAPPRHAAGVRVLPARVGGGAYRFSREFVRSNLVAYPERPMVRLHAGQSLKTEWNGKWWTSRVIQVDASLVQVHFEEDNRTEWIYRGSTRLAPLYLELQAAERHRARPMPRTKAQAREVQATENHRARRMPRTKVQARVRTSLSPRRCKLQMHIERGQAYAKEQGSDQGASRRESSSQAYAPDQGSGQACKTSRVIQVDASLVQVHFEEDNRTEWIYRGSTRLAPLYLELQAAERHRARPMPRTKAQAREVQATETHRARLMPRTKTQAREEQAAERDIERIGAKPMPRIKAQTRVLGVALKISSRVDGIGLKDADGRKAMTQTRVNSSLITPKDQLESGQACKSSRVIQVDASLVQVHFEEDNRTEWIYRGSTRLAPLYLELQAAERHRARPMPRTKAQARVQAAENHRAMPMPRTKAEAREEQAAENHRARPMPRTKAQARVRSSVPGAAGGREAPGQAYAPDQGSGQETHRAKPMPRTKVQTRMLGVALKISSRVDGIGLKDADGRKAMVRYLHRSVQVIPGDPSGRVAGASALRGGQPHGVDLPRVHAPRAAVPGAAGGREAPGQAYAPDQGSGQGNIICTWSRRRPGGTGPGLCPGPRLRPGRCKPQRHIERGQAYAKDQGSDQETHRARTMPRTKAQARAQARVRSSLYLELQAAGRHRARPMPRTKAQSRVNMPYVEYTRSEEQNKSEQAPAPQPTITALEREVRQRAVARKSTAAPAQPAHAAPDAVTSRVVYYTPKNAVKPYKMATHNCGPHCKRKDTLALKDLRTYNPLAKPLLSGWERQIVRFNGHKEVMYRAPCGRRLRNMRELHRYLRLTDNDMPVDLFDFTPHTHCLAEFVLNKCLVGKKDLSHGKENVPVPCVNYYDESLPEFCSYNTERTPTAGVPLNLDPEFLCGCDCTDDCEVRRLPLRDVNYLSHGEENVPVPCVNYYDESLPEFCSYNTERTPTAGVPLNLDPEFLCGCDCTDDCEDKSKCACWKMTLEGARTIGLRGVNVGYVYKRLPEPLPSGIYECNSRCKCKQTCLNRVAQHPLQFKTSGTTTAFDIIKYLQDRTKSHVFKTLNRGWGIRALNDVPRGSFLCVYAGNLLTDATANMDGLNEGDEYLAELDYIEVVEQMKEGYEEDIPEADKKLDKKSKANLEEPETSSSEEEEAPSKDEKEDGDFQPGVMIGMGVTEFSKRLRKRDKIKKEKGDGAKETDNQEKKDGDKADEDCITISDDEEVREPSRFMAEAGMESNEFVSKYRSVRSHFGKDEACYIMDAKVQGNIGRYLNHSCMPNVFVQNVFVDTHDPRFPWVAFFALSHIKAGTELTWNYNYDVGSVPGKALYCYCGAPNCRGRLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-