Cmed070460.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- kn
- Assembly
- GCA_014851415.1
- Location
- Chr12:10863688-10884376[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-92 3.5e-88 296.2 0.1 38 181 11 154 1 154 0.97
Sequence Information
- Coding Sequence
- ATGGGGACGAAAACTATATCCCTCAGGGGCGCCGCGGTCTTCAGCAGCGTAGGCGTAGGGCGAGCGCACTTCGAGAAGCAACCGCCCAGCAACCTGCGCAAGAGTAACTTCTTCCACTTCGTAGTGGCCCTGTACGACCGCGCCGGGCAGCCCGTGGAGATCGAGAGGACTGCCTTCATCGGGTTCATTGAGAAAGATCAAGAAGCCGAAGGACAGAAAACAAACAATGGAATCCAATACAGACTACAATTGCTTTACGCTAATGGTATTAGACAAGAACAAGACATTTTCGTCCGTCTCATCGACTCGGTGACAAAACAGCCCATCGTATATGAAGGCCAAGATAAGAATCCCGAAATGTGTCGAGTTCTGCTTACACACGAAGTCATGTGCAGCCGGTGTTGTGACAAGAAAAGTTGCGGTAACAGAAATGAAACTCCATCAGATCCTGTCATCATTGATCG
- Protein Sequence
- MGTKTISLRGAAVFSSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00276060;
- 90% Identity
- iTF_01537633;
- 80% Identity
- iTF_00113125;