Csas009643.1
Basic Information
- Insect
- Carposina sasakii
- Gene Symbol
- kn
- Assembly
- GCA_014607495.2
- Location
- CP053161.1:553506-576021[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.3e-94 1.2e-89 301.9 0.0 11 182 23 184 14 184 0.95
Sequence Information
- Coding Sequence
- ATGTTCGGCCTGCATCACCAAGAAGCGGCGGGCGGGTTGCACACGCAGCCTCGCGGGCCTGTCACTTCGCTCAAAGAGGAGCCTCTGACCCGTGCCTGGATGACGCCTACCTCCTTAGTTGACAATGCCAACACGGTAGGCGTCGGCCGCGCGCACTTCGAAAAACAGCCGCCAAGTAACCTGCGCAAGAGCAATTTCTTCCATTTCGTCGTTGCGCTGTATGATAGAGCAGGACAGCCTGTAGAGATTGAACGCACCGCCTTTATTGGATTTATTGAGAAGGATCAGGAGGCTGAAGGGCAAAAGACGAATAACGGTATCCAGTACAGGCTTCAATTACTTTATGCAAATGGTATAAGACAAGAGCAAGATATTTTTGTTCGACTAATCGATTCGGTTACAAAACAGCCCATCGTTTACGAAGGACAGGACAAGAATCCGGAAATGTGCAGGGTACTATTAACGCACGAAGTTATGTGCAGTCGGTGTTGCGATAAGAAAAGCTGTGGCAATAGAAACGAGACACCCTCGGACCCCGTGATTATAGATCGGTAA
- Protein Sequence
- MFGLHHQEAAGGLHTQPRGPVTSLKEEPLTRAWMTPTSLVDNANTVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01336614; iTF_00008688; iTF_01083087; iTF_01452124; iTF_00249505; iTF_00185926; iTF_00197163; iTF_00467981; iTF_00347310; iTF_01388256; iTF_00420333; iTF_00682158; iTF_00695265;
- 90% Identity
- iTF_01538528;
- 80% Identity
- -