Cmed021900.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- Stat5b
- Assembly
- GCA_014851415.1
- Location
- ctg2079:17162-21815[+]
Transcription Factor Domain
- TF Family
- STAT
- Domain
- STAT_bind domain
- PFAM
- PF02864
- TF Group
- Beta-Scaffold Factors
- Description
- STAT proteins (Signal Transducers and Activators of Transcription) are a family of transcription factors that are specifically activated to regulate gene transcription when cells encounter cytokines and growth factors. This family represents the DNA binding domain of STAT, which has an ig-like fold. STAT proteins also include an SH2 domain Pfam:PF00017.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0045 18 5.7 0.0 102 121 1 22 1 24 0.83 2 3 7.8e-05 0.31 11.4 0.1 99 121 23 47 21 48 0.85 3 3 5.7e-13 2.3e-09 37.7 0.2 99 133 48 84 46 84 0.97
Sequence Information
- Coding Sequence
- ATGGACGAGAAGCTGACGCTGCTGTTCCAGTCCCAGTTCAACGTCGGCGGCGGCGAGCTGGTCTTCCAGAGCGTGATGGATGAGAAGCTGACGCTGCTGTTCCAGTCCCAGTTCAACGTCGGCGGCGGCGAGCTGGTCTTCCAGAGCGTGATGGATGAGAAGCTGACGCTGCTGTTCCAGTCCCAGTTCAACGTCGGCGGCGGCGAGCTGGTCTTCCAGGTTTGGACGCTGTCGCTGCCGGTGGTGGTGATCGTGCACGGCAACCAAGAGCCCCACGGCTGGGCCACCGTCACCTGGGACAACGCCTTCAGCCCGCCTGGCCGCGTGCCCTTCGCTGTGCCTGATAAGGTCGCATGGGGCCAGCTAGCAGAGACTCTCCGCATCAAGTTCTACTCGGCCACGTCGGGAGGGGACCTCTCCGAGGACAACCTTCGGTTCTTAGCCGAGAAGATCTTTAGGAGCAGTCTGCCGATGAACTCTTTGGAACTCAACGCGATGATGGTGAGCTGGACGCAGTTCTGCAAGGACGCGCTGCCGGAGAGAAACTTCACCTTCTGGGAGTGGTTCTACATGGTCGTCAAGGTCACCAGGGACTACCTGCGGACCCTGTGGTGTGACGGCCTTATCATGGGCTTCATCCAGAAGAAGCAAGCCGAAGAGATGCTGTCGAAGTGTCCTCCGGGCACGTTCCTGCTGCGCTTCTCCGACTCCGAGCTAGGGGGCATCACCATCGCTTGGGTTGGAGGTAAATGTTAA
- Protein Sequence
- MDEKLTLLFQSQFNVGGGELVFQSVMDEKLTLLFQSQFNVGGGELVFQSVMDEKLTLLFQSQFNVGGGELVFQVWTLSLPVVVIVHGNQEPHGWATVTWDNAFSPPGRVPFAVPDKVAWGQLAETLRIKFYSATSGGDLSEDNLRFLAEKIFRSSLPMNSLELNAMMVSWTQFCKDALPERNFTFWEWFYMVVKVTRDYLRTLWCDGLIMGFIQKKQAEEMLSKCPPGTFLLRFSDSELGGITIAWVGGKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00420322;
- 90% Identity
- -
- 80% Identity
- -