Cmed079000.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- Xbp1
- Assembly
- GCA_014851415.1
- Location
- Chr7:3814086-3817825[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7 5.5e+03 -2.7 0.0 15 25 26 36 25 37 0.77 2 3 4.8e-17 3.8e-14 52.3 9.7 2 52 41 91 41 93 0.97 3 3 0.00045 0.36 10.7 0.5 32 55 85 108 85 110 0.91
Sequence Information
- Coding Sequence
- ATGAGTACACCGATAATCATCACCGTTCCCAACAACTACTTGGTGGATGAGGACACGAAGGTTGTGGTGGACGTCTCGGCGCCGCCTTCGAGGAAGCGGCGCCTGGACCACCTGACGTGGGAGGAGAAGATGCAGAGGAAGAAATTGAAGAATCGCGTGGCGGCGCAGACGTCGCGCGACAGGAAAAAGGCAAAAATGGACGAAATGGAACACAAGCTACAACTACTCGTTGAGTCAAATGAGCGTTTGACGAACGAGGTGGCGAGCTTAAAAGCTCTAAACGAGCGTCTGCTGAGCGAGAACGTGTCGCTCCGCAGCGAGGCGGCGGCGCGGCCCGTCGCGGGGGCCCCCGGACCAGCAGCGTCTCCTCGGCAGAAGGACGGGCCCCCGCCGGCGAGCCGCGCGGCGCGCCTGCTGCTGGCGATGTGCCTCCTCTCGCAGACCTCCTCGCCCACCTCGACTCCGAGGAGTACCTCGACACGCTCAACCAGCTTGCAGACTCCCTCCTCAAGGAAATTGATGCAGGTGCTGCAGGAGCGGATGAAGATGGTCCTTGGAAAGTGCCTTGAAGGAACTCAAGTGGTGGGGACCGCAGCAGAGCAACTGGAACCCGATGGAGGTGCGGTCGTAGACCTGAAGCACGACGTGCACAGGATACTGACGCAGCACTCCTACGCGCACCCCTACGCGCCCGACGTACTCATCACGGAGCCCGCAGAGACGGTTCAAGTCAAGGAGGAGCCCGGCAGCGACAAGGGGGACATCTTCTACGCCAGCTTCGAGGAGGCCAACGACTGCATCACCATCGAGGTGCCGTGCGACGACCAGGTCGTTGAAGAGGCCGCGCCCATACAAGTCGAGACAGACTTCACCTTGCCAGACAACTCGGTCTCCCTCGAGTGCGACCTGAAGATGCTCTCGCCGATGAGTCTGTCTCCGAAGTCGGTGGAGGAGAACCTGTTGCTGTCCCCCTCGCACAGCAGCCTGAGCTCGGACCTGGGCTACGAGTCGCTGGCGTCGCCGCTGAGCGAACCCGATTCTATGGACTTGTCAGATTTTTGGTGTGAATCATTTTCGGAGCTGTTCCCTGGCCTCGCGTGA
- Protein Sequence
- MSTPIIITVPNNYLVDEDTKVVVDVSAPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEHKLQLLVESNERLTNEVASLKALNERLLSENVSLRSEAAARPVAGAPGPAASPRQKDGPPPASRAARLLLAMCLLSQTSSPTSTPRSTSTRSTSLQTPSSRKLMQVLQERMKMVLGKCLEGTQVVGTAAEQLEPDGGAVVDLKHDVHRILTQHSYAHPYAPDVLITEPAETVQVKEEPGSDKGDIFYASFEEANDCITIEVPCDDQVVEEAAPIQVETDFTLPDNSVSLECDLKMLSPMSLSPKSVEENLLLSPSHSSLSSDLGYESLASPLSEPDSMDLSDFWCESFSELFPGLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00347266;
- 90% Identity
- iTF_00347266;
- 80% Identity
- iTF_00347266;