Cmed118590.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- Xbp1
- Assembly
- GCA_014851415.1
- Location
- ctg9163:1335-5079[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-16 5.9e-13 48.4 12.3 6 59 2 55 1 58 0.93 2 2 0.00023 0.18 11.6 0.5 32 55 42 65 41 67 0.91
Sequence Information
- Coding Sequence
- ATGCAGAGGAAGAAATTGAAGAATCGCGTGGCGGCGCAGACGTCGCGCGACAGGAAAAAGGCAAAAATGGACGAAATGGAACACAAGCTACAACTACTCGTTGAGTCAAATGAGCGTTTGACGAACGAGGTGGCGAGCTTAAAAGCTCTAAACGAGCGTCTGCTGAGCGAGAACGTGTCGCTCCGCAGCGAGGCGGCGGCGCGGCCCGTCGCGGGGGCCCCCGGACCAGCAGCGTCTCCTCGGCAGAAGGACGGGCCCCCGCCGGCGAGCCGCGCGGCGCGCCTGCTGCTGGCGATGTGCCTCCTCTCGCAGACCTCCTCGCCCACCTCGACTCCGAGGAGTACCTCGACACGCTCAACCAGCTTGCAGACTCCCTCCTCAAGGAAATTGATGCAGGTGCTGCAGGAGCGGATGAAGATGGTCCTTGGAAAGTGCCTTGAAGGAACTCAAGTGGTGGGGACCGCAGCAGAGCAACTGGAACCCGATGGAGGTGCGGTCGTAGACCTGAAGCACGACGTGCACAGGATACTGACGCAGCACTCCTACGCGCACCCCTACGCGCCCGACGTACTCATCACGGAACCCGCAGAGACCGTTCAAGTCAAGGAGGAGCCCGGCAGCGACAAGGGGGACATCTTCTACGCCAGCTTCGAGGAGGCCAACGACTGCATCACCATCGAGGTGCCGTGCGACGACCAGGTCGTTGAAGAGGCCGCGCCCATACAAGTCGAGACAGACTTCACCTTGCCAGACAACTCGGTCTCCCTCGAGTGCGACCTGAAGATGCTCTCGCCGATGAGTCTGTCTCCGAAGTCGGTGGAGGAGAACCTGTTGCTGTCCCCCTCGCACAGCAGCCTGAGCTCGGACCTGGGCTACGAGTCTGGCGTCGCCGCTGAGCGAACCCGATTCTATGGACTTGTCAGATTTTTGGTGTGA
- Protein Sequence
- MQRKKLKNRVAAQTSRDRKKAKMDEMEHKLQLLVESNERLTNEVASLKALNERLLSENVSLRSEAAARPVAGAPGPAASPRQKDGPPPASRAARLLLAMCLLSQTSSPTSTPRSTSTRSTSLQTPSSRKLMQVLQERMKMVLGKCLEGTQVVGTAAEQLEPDGGAVVDLKHDVHRILTQHSYAHPYAPDVLITEPAETVQVKEEPGSDKGDIFYASFEEANDCITIEVPCDDQVVEEAAPIQVETDFTLPDNSVSLECDLKMLSPMSLSPKSVEENLLLSPSHSSLSSDLGYESGVAAERTRFYGLVRFLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00347267;
- 90% Identity
- iTF_00347267;
- 80% Identity
- iTF_00347267;