Cmar008323.1
Basic Information
- Insect
- Clunio marinus
- Gene Symbol
- dmd-4
- Assembly
- GCA_900005825.1
- Location
- CVRI01000011.1:358525-360501[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-25 1.6e-21 76.1 8.9 1 47 18 64 18 64 0.98 2 2 0.13 4e+02 1.2 1.2 20 37 258 275 254 280 0.69
Sequence Information
- Coding Sequence
- ATGAAAGTTATGTTAAAGAAACCGAATAGTCAACAAAATCAGCAGATATCACGAATACCAAAGTGTGCTAGATGCCGTAATCATGGCATTATAAgCGGATTACGAGGACATAAAAAATCTTGCACGTACAAAAATTGTCGGTGTCCTAAGTGCGACTTAATTTATGAAAGACAACGGATTATGGCAGCTCAGGTTGCACTGAAAAGGCAACAAGCCGTTGAAGATGCTATCGCATTGCGATTGGCATCAACTGAGAGTGGAAAAGCTTTAGAAGCGTTACCGCCGGGAAAAATTTTCGGCATGACGATCACTGAGCCAAAGACAGAAACAACGAGCTCATCATTTTCTGATATCAAAATTCCAACAGAATCTAATAAAAAACCTGATTCATCATCAGTGTCATCAACTTCGAAATCTCCGCTTGTTTCTCAGAATGCAATTGAAATGCTATCATCATTGTTTCCACATCGCAAGCGATCAGTTCTTGAATTAGTTCTCAGACGTTGTGACCTCGATTTGCTGAGagCGATTGAACAATGCAGCAAGACACAACAGCCGTCACAAATTTATCCACCTCATTCTTCACCAGATTCAAGTCCGGAAATAATTCAAAGCGCTTTTCGGCCgattaattcaaattcatcatcgtcatcatctaTTACACCAAACTTACATCAACTCTCATCAATTCCAACCCAGAATCCATCAAGCTACACGTCACTCATTGCTTATCCCAACAAATGGTTTCTTCCAATACCTGTAACAATGAGTCATCATCATTTGGCGAACTTCCCTCGATGCAGTTTGGCTAATTGTACGATGTGTTTGCATCATCCTGCAGCAATTTAA
- Protein Sequence
- MKVMLKKPNSQQNQQISRIPKCARCRNHGIISGLRGHKKSCTYKNCRCPKCDLIYERQRIMAAQVALKRQQAVEDAIALRLASTESGKALEALPPGKIFGMTITEPKTETTSSSFSDIKIPTESNKKPDSSSVSSTSKSPLVSQNAIEMLSSLFPHRKRSVLELVLRRCDLDLLRAIEQCSKTQQPSQIYPPHSSPDSSPEIIQSAFRPINSNSSSSSSITPNLHQLSSIPTQNPSSYTSLIAYPNKWFLPIPVTMSHHHLANFPRCSLANCTMCLHHPAAI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00199109;
- 90% Identity
- -
- 80% Identity
- -