Cmar006026.1
Basic Information
- Insect
- Clunio marinus
- Gene Symbol
- dsx
- Assembly
- GCA_900005825.1
- Location
- CVRI01000040.1:1177647-1179907[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-19 3.5e-16 59.0 9.4 4 45 9 50 5 52 0.94 2 2 1.5e-20 4.6e-17 61.9 9.6 1 47 118 164 118 164 0.97
Sequence Information
- Coding Sequence
- ATGGGCGGGATTCGGAACTATCAAGTCTGTGCTCGTTGTCGAAATCATAACATTCGTAATATTTTGAAAGGTCATAAAAAGAATTGTCCGTTCAAGCTGTGCACTTGCGACAAATGTCTCGTGACAAGGGATCGTCAAAGTTTCATAGCAAGGGAAATTGCGATGCACAGATAcgagataaaaaataaaactgacaTGGAGAGTGAAACAgttcaaagtttaaaattgaaCATAGTTCGAAGTAaatcaacagaagaaaagTCATCGTCGTCTAGTTCCGGCGAATCGGGTGGAGTCGTGGAAAGTGTgagaaaatatatgaaaataagTGAGAGGAATGGTGAAGTAAGAAGAGATCAGTTGTGCTCTCGTTGTCGAAATCACGGAGAACATCGGTTACTAAAAggtcacaaaaatatttgtccATTCGCTAATTGTATTTGCGACAAATGTGAGATTACTTTAAAACGTCGTGAAATAATGGCGAAACAGATTAAAGACTATAGAAGTAACCGATTATCAGATTCAATAATAAGTTCACCGGAAACTGAGACATCATCCGAAATTGACAATGATTTTGATAAGCTAAATGTCGAACAGTTTGTTGACTATGAGCCCGTCGAGAATCGTGACCTTTTCTTCATGATTCAAAGTTTGTATGAAAAATATGGAATTCAAAGcagtgaaacaaaaattcaactGATTTATGCATTTGCACATTTGGCGAAAGGAAATTGGAGTGAAATAGAAAAAGCTCTTGAGAAAGGTTCCTCCTATGCTCGAAAATATTCTGTTCAACACAACTTGATTGCTTACCAAAATAATACACTGATGAATTCACATATGTTATCATATGACCCGAATGCAGTTGCAAGAGTTAAACAACCCGACAACAGTttttaa
- Protein Sequence
- MGGIRNYQVCARCRNHNIRNILKGHKKNCPFKLCTCDKCLVTRDRQSFIAREIAMHRYEIKNKTDMESETVQSLKLNIVRSKSTEEKSSSSSSGESGGVVESVRKYMKISERNGEVRRDQLCSRCRNHGEHRLLKGHKNICPFANCICDKCEITLKRREIMAKQIKDYRSNRLSDSIISSPETETSSEIDNDFDKLNVEQFVDYEPVENRDLFFMIQSLYEKYGIQSSETKIQLIYAFAHLAKGNWSEIEKALEKGSSYARKYSVQHNLIAYQNNTLMNSHMLSYDPNAVARVKQPDNSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -