Cmar012482.1
Basic Information
- Insect
- Clunio marinus
- Gene Symbol
- Bgb
- Assembly
- GCA_900005825.1
- Location
- CVRI01000044.1:619407-622922[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-76 1.5e-72 242.9 1.8 1 159 35 196 35 201 0.95 2 2 1.1e-42 7.5e-39 133.3 0.0 54 159 201 303 197 308 0.93
Sequence Information
- Coding Sequence
- atgatgaatatGAACATGATGAACGATCCAGCATTTGCTGGAATGCTTCCATTTGACACAATGGGATTATATGAGCCTCCAAAGCCTcgatatatttttaaaatgccTCGAGTTGTTCCCGATCAGAAGGAGAAGTTTGAGAGTGACGATATGTTTAGGAAGCTGAGTCGAGATAGTGAAATTCGTTACACAAGTCATCGAGATCGACCACACGAAGAACGTAAAATTCGCTTTATTAATGGCTGTCGAGATGGTCGAACAGAAATCTCCTTCGCAGCCACTGGAATCAACTTCCAACTCACCTTCAATCCAAATCCAATGatgtatcatcatcatcatcatctgacGAACTTTGAAAGGGAATTGGACTTTGATAAAGAACACGGAAAAGTTCATATCAAGTCACATTTCATCATGAACGGAGTTTGTGTGAGATTTCGTGGATGGTTGGATCTTGAGCGACTCGACGGCATTGGACGTCTCGAATATGACGAGCGACGTGGTGCACATGAAGACGCAATTCTCAAAGAACAACTCGAACGATACAGTCAAAGACTGAAAGATTTCGAGGACACGAAGCACAACATAAATGTCGGAAATCAAATCGCTTTCGTCGCTAGTGGCATCAACATCCAGCTTTTCTTCACTCCTTATCATCCTTATCCGACAAATTTCGAACGTGAATTAGATTTCGATAAAGAACATGGAAAAGTTCATATCAAGTCACATTTCATCATGAACGGAGTTTGTGTGAGATTTCGTGGATGGTTGGATCTTGAGCGACTCGACGGCATTGGACGTCTCGAATATGACGAGCGACGTGGTGCACATGAAGACGCAATTCTCAAAGAACAACTCGAACGATACAGTCAAAGACTGAAAGATTTCGAGGACACGAAGCACAACATAAATGTCGGAAATCGTGGAAGTTGGCGACAGTGA
- Protein Sequence
- MMNMNMMNDPAFAGMLPFDTMGLYEPPKPRYIFKMPRVVPDQKEKFESDDMFRKLSRDSEIRYTSHRDRPHEERKIRFINGCRDGRTEISFAATGINFQLTFNPNPMMYHHHHHLTNFERELDFDKEHGKVHIKSHFIMNGVCVRFRGWLDLERLDGIGRLEYDERRGAHEDAILKEQLERYSQRLKDFEDTKHNINVGNQIAFVASGINIQLFFTPYHPYPTNFERELDFDKEHGKVHIKSHFIMNGVCVRFRGWLDLERLDGIGRLEYDERRGAHEDAILKEQLERYSQRLKDFEDTKHNINVGNRGSWRQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -