Calb002565.1
Basic Information
- Insect
- Clogmia albipunctata
- Gene Symbol
- dl
- Assembly
- GCA_001014945.1
- Location
- JXOV01006234.1:1-575[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 6.9e+03 -3.1 1.6 6 33 21 49 17 52 0.61 2 2 1.5e-55 5.4e-52 176.2 0.1 1 124 54 177 54 182 0.97
Sequence Information
- Coding Sequence
- ATGTTCCCCACAAACAATGGAGAGGCTTGTGCTGGACCATCGGCCCAAgcccagcagcagcaacagaaCCAACAACAGCATCAGTTCAGACAGCCAGCAGAGAGAACGCcgagcaacagcagcagccaTAGGAGTCACTCGAAGAGGCAGCAAGCCTACGTGGAGATTTTGGAACAGCCCACCCCAAAATCGCTAAGGTTTCGCTACGAGAGCGAGGGCAGATCAGCTGGATCGATCCCAGGAGTCAGAAACACACCCGAGACCAAAACATATCCCAGTATTAGAGTGGTGGGCTACAAGGGAGATGCCTTCGTGGTTGTGTCCTGCGTGACCAAGGACTTTCCCTACAAGCCCCATCCCCACAATCTGGTCGGCAAAGACTGCAAAACCGGAGTCTGTAGAGTTAAAATCACCGACGAATCTATGACCATCACATTTGGCAACCTCGGCATCCAGTGTGTCAAAAAGAAGGACGTCGAGCAACGCCTGAAGCAGAGGGAGGAGATCAAAGTGGATCCTTTCAAAAGTGAGTTGAAATTGAAGTTCCTGTATTGTATGGCAATTTGA
- Protein Sequence
- MFPTNNGEACAGPSAQAQQQQQNQQQHQFRQPAERTPSNSSSHRSHSKRQQAYVEILEQPTPKSLRFRYESEGRSAGSIPGVRNTPETKTYPSIRVVGYKGDAFVVVSCVTKDFPYKPHPHNLVGKDCKTGVCRVKITDESMTITFGNLGIQCVKKKDVEQRLKQREEIKVDPFKSELKLKFLYCMAI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -