Calb015598.1
Basic Information
- Insect
- Clogmia albipunctata
- Gene Symbol
- dl
- Assembly
- GCA_001014945.1
- Location
- JXOV01004965.1:793-4442[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6 1.3e+04 -4.0 1.5 7 32 20 46 17 49 0.60 2 2 1.7e-73 6.4e-70 234.5 0.1 1 169 52 218 52 218 0.99
Sequence Information
- Coding Sequence
- ATGTTCCCCACAAACAATGGAGATGCTGGTGCTGGACCATCGGCCCAAGCCCAGCAACAGAACCAACAACAGCATCAGTTCCGACAGCCAGCAGAGAGAACGCcgagcaacagcagcagccaTAGGAGTCACTCGAAGAGGCAGCAAGCCTACGTGGAGATTTTGGAACAGCCCGCCCCAAAATCGCTAAGGTTTCGCTACGAGTGCGAGGGCAGATCAGCTGGATCGATCCCAGGAGTCAGAAACACACCCGAGACCAAAACATATCCCAGTATTAGAGTGGTGGGCTACAAGGGAGATGCCTTCGTGGTTGTGTCCTGCGTGACCAAGGACTTTCCCTACAAGCCCCATCCCCACAATCTGGTCGGCAAAGACTGCAAAACCGGAGTCTGTACAGTTAGAATCACCGACGAATCTATGACCATCACATTTAGCAACCTCGGCATCCAGTGTGTCAAAAAGAAGGACGTCGAGCAACACCTGAAGCAGAGGGAGGAGATCAAAGTGGATCCTTTCAAAACTGGATTTAGCCACCGTAATCAACCGTCTAGCATCGACCTAAATGCAGTTCGATTATGTTTTCAAGTGTTTGTGAATGGTCCAAATGGACTGACGGCGCTGCAGCCCGTCGTCTCTGAGCCAATTTTCGACAAAAAGGCCATGTCGGAGCTGGTGATCTGCAAGCTGAGCGACTGCAGCTCACCGATCACCGGCGGCAAAGACATCATCCTGCTGTGCGAGAAAGTGGCGAAGGAGGACATCGCGGTGAGATTCTACGAGGAGAAGGA
- Protein Sequence
- MFPTNNGDAGAGPSAQAQQQNQQQHQFRQPAERTPSNSSSHRSHSKRQQAYVEILEQPAPKSLRFRYECEGRSAGSIPGVRNTPETKTYPSIRVVGYKGDAFVVVSCVTKDFPYKPHPHNLVGKDCKTGVCTVRITDESMTITFSNLGIQCVKKKDVEQHLKQREEIKVDPFKTGFSHRNQPSSIDLNAVRLCFQVFVNGPNGLTALQPVVSEPIFDKKAMSELVICKLSDCSSPITGGKDIILLCEKVAKEDIAVRFYEEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -