Cinc001943.1
Basic Information
- Insect
- Clistopyga incitator
- Gene Symbol
- -
- Assembly
- GCA_947507545.1
- Location
- OX382177.1:10868054-10875596[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 6.5e-06 0.00069 20.3 1.0 1 23 213 235 213 235 0.98 2 31 0.0028 0.3 12.0 1.9 1 23 258 281 258 281 0.96 3 31 0.00021 0.022 15.5 0.5 2 23 288 310 287 310 0.96 4 31 0.00021 0.022 15.5 0.4 1 21 330 350 330 351 0.95 5 31 0.0055 0.59 11.0 0.3 2 23 448 469 447 469 0.96 6 31 0.0074 0.79 10.7 0.2 1 23 475 498 475 498 0.91 7 31 0.00012 0.013 16.3 0.1 1 23 558 581 558 581 0.96 8 31 0.0083 0.88 10.5 0.4 1 23 587 610 587 610 0.96 9 31 0.15 16 6.5 1.9 1 23 623 645 623 645 0.97 10 31 2.6e-05 0.0028 18.4 0.6 3 23 690 711 688 711 0.96 11 31 0.038 4.1 8.4 0.9 2 23 776 799 775 799 0.93 12 31 5.8 6.1e+02 1.5 0.0 2 23 808 830 808 830 0.83 13 31 0.11 11 7.0 0.1 2 23 837 859 836 859 0.95 14 31 1.3e-05 0.0014 19.3 1.2 1 23 867 889 867 889 0.98 15 31 0.18 19 6.3 1.1 2 23 923 946 922 946 0.87 16 31 0.00022 0.023 15.5 3.3 1 23 949 972 949 972 0.97 17 31 0.005 0.53 11.2 0.5 2 23 979 1001 978 1001 0.96 18 31 0.0033 0.35 11.7 5.1 1 21 1028 1048 1028 1049 0.95 19 31 0.0087 0.93 10.4 1.7 2 23 1063 1084 1062 1085 0.92 20 31 0.14 14 6.7 1.1 1 23 1088 1111 1088 1111 0.95 21 31 0.075 7.9 7.5 2.6 2 23 1118 1141 1117 1141 0.91 22 31 3.1 3.3e+02 2.4 0.2 2 23 1149 1171 1149 1171 0.94 23 31 3.8 4e+02 2.1 0.0 2 23 1178 1200 1177 1200 0.87 24 31 0.23 25 5.9 2.7 2 23 1209 1231 1209 1231 0.96 25 31 1.3 1.4e+02 3.6 0.9 2 23 1237 1259 1237 1259 0.92 26 31 0.015 1.6 9.7 0.1 1 23 1316 1339 1316 1339 0.96 27 31 0.0055 0.58 11.1 2.5 1 21 1370 1390 1370 1391 0.95 28 31 0.14 15 6.7 1.2 2 23 1490 1512 1489 1512 0.94 29 31 0.48 52 4.9 0.4 2 23 1519 1541 1518 1541 0.94 30 31 0.72 76 4.4 2.5 1 23 1552 1574 1552 1574 0.97 31 31 0.079 8.4 7.4 0.1 3 19 1583 1599 1583 1602 0.95
Sequence Information
- Coding Sequence
- ATGAGTCTCAGCTGGTTCAGAGTACTTTCCCTCTCGAATGCGTGGATCGTACGCCACGATCCGAAATACAGGAGGAAACGAGGAAATTTTTCACTCAAACGGATTGAAGAGCATGATCGACTTCCCAAGTGTCTGTGCTACAGATGCATGTACAATCTTGAAAATTTTTACGACTTCAGAACGGCCTGCGTCCACGCAGTTGCGTTATTGGAAAGGTGTTTGCCACCGGACAGCAATACTGCAGAAAGTGAAATACAAAATGACGTTAAGAATTATTCGGAATTGCGAACGGAGCTTCTCAAGCAAAAGGAAAAAATGCCTATTCTCATACCCGAGGCCCCCATAGTAAATCCTAATGCAGCGCTGGGTACACCGCCCAGACTGAACAGTGATGGCGAGGCGGATCAGGAGATCGAGGAGATTCTCGACGCTAGCGGCACCGAGGATGGCTTCGAGGATACGGAAGATCGGAAATCGGACGAGTACGAGATGGACATGGAAACGAATCCCAGTGATTTTTTGGAAATGACCCCGATGGTAACGGAGGAATTGGACGATAACGAAGCACCGAAACCTCCAAAAGTCGAACCGCGAAATTCCGATGTCTTTCAGCATACGGCTGAGCAACACGAAGTTTACGTTTGCTCGCTGTGCAACAAGGCGTTCAGTTCCAAAGGCCATTTGTCTCTTCATGCGAGAATCCATGTGGGCGCGGGCGACGTTATCGGCGCCAAAGTCGTCACGGACGATCACACTTCGTACAAGAGACCTTATCAATGCGATCTGTGCAACAAATCCTATTCGACGGCGAAGCATCGATGGGGTCACGTCTCCACGACCCACAGAGGGCATCCCGCCGTAACTTGTGCTTATTGTTCGCGGATATATTCAACGCGAACGAATCTCGAGGAGCACATAAAATCAAGGCACACAGGTTTACCACCGCCTCCGGAGTTGCCGATTCCTTACGTTCAACCGGACAACAGATACAAATGCAAAACATGCCCAAAAATGTATACCACAGTAACAGAACTGAATAAACACGGAAGAGTATGTCTGGGCGATCGGCCGAAGGAAAAACCAAATAAAAAAGCGCCGCGCAAGAGTAAGAGCCTCATCGATACGACGGATCCGTCGAGCACCGACACCGACAACGACAGCAAGGATTACAGAAACGCCGAGGCTAAATTATCGAAAAATCCACAGCTCACGATTCTCAAACAGGCACTGACTAAAGGCGAAGGCTCGAAGCGAGATTACGAGGACAGAAATGCTTCGAATTATAAGCTAGTCGAAATACCGAAGACAGACGGAGTCGAAGGGGACGGACAAAAGCGATGGTATTGCGAGACTTGCCCGCAGAATTTTTCGTCGATAGACAAACTTAAAGAACACGAGACGACCCACGACGCGGAGAGACCATATATATGTATATTGTGCGAAAAGGATTTCGTTGTAAAATCATCGTTGAGCAGACACATACTTTCGTCGCACGGTGTAGATCCCAGTCCGATAGTTGACAGTGATAAGTGCTTGAAGAAAACGGTATTGGCGCAGTCGTGGTCGAAACAGTTGATAAAAACGGAAAGAACAAAAAGTGGGAAGGAGGGTTCGGTATCGTCGGAGGACGTCGAAAGCGCGTCTGGTAATATGATTGAGATCGAGACGGTATTCGTGTGTGAAATTTGTACACGGGATTTCAACGACCGCGCGTCATTGTGGCTTCACATCCGCGCGACTCACAAAGAATGCGCCGCTTTCGCGTGTGGCGTGTGCTTAAAAATTTGTTCCGACAACGCGCAGCTCCTCAATCACGTTAATATGTATCACGGAGGCTCGAAACTCTTGATTTCGGAACAACGAAGATACAGCTGCACGATATGCGGAAGGCAACACGATTCCAGAAAAAAATTGATGACCCACGTGTCGATACACAACGTCGATCCTGGCTACGATCCCGCAAGCTTCGTTCAATTGAACAGTAATTATTACAACGAGAATGTGAACAGCAACGAAGCCAACGAAGCGCTGATGGATTTCGATGCCGAGGATGGCGAGAAAATTGATTGTTATATTTGTTACAAATCTTTTCCCAATGAGGATCATCTCATTAGGCATCAACGGAATGCGCACAAGTCCGAGCCTGTGATACCGAGTGGCGGAGACCCATCGGCGACCAGCAATGGACCTGGGGCGCCGGGAGTCAACGGCACCAAAGCTCAATATCATCTGTTCTTCGTCTGCGAACTATGCGGAAGTTCTCATCCGAGCAAATGGGAACGTTGGCTGCATGTCAGCAGCAATCACAGCGAAGAGCCTTCGATAAGATGCGAACGCGAAGATTGCGGCAAAATCTTTGCTACGAAGACTCTGCGAAACGACCACGCCCAACACCATTTAATCCAAGGCTCCTCACCCAACACTTGCGAAGTTTGCGGAAAATTGTGGGGCAGTCGAGTGGATTATTGGAAGCACGTAATGGGAGTTCATTCGGACACAGTCCCGTTGATATGTGGCGTCTGTCTAAAAGTATTTCCCGACGTGATGAAGCTGAGCACTCACGTGAAATCCAATCACTGGCCTCTGACAAACGGCGACTTCAGTTGTGACATTTGCGGCAGGCCTTATTCCAACAAATCGAAAATGTCGCGCCATCGGAAGATTCACGGGTTGGAGGTCGAGACCACGGCGAACAATGGCGTAAACGAGAACGCAAATAACGAATCTTTGCCTTACGAGAAGACCGCGGTACCGGAAACCGAATTAACGTGCGAACTGTGCGCCGAGCTTACTTTCTACACTTGGGAAAGTCTCTGCAATCATCGTAGATCGATGCACGGCCTATTTCCCTGTGATCTTTGCAACAAATGTTACGGCAGAACGTCCCATCTGTGGAAACACGTCAATCGCGTTCACAAAGGACACAAAGACGTGACTTGTAGTTATTGCATGAAAACTAGCGCCTCGAAGGATCATCTAGCGGCGCACATATTGAAGATTCATCGCTACGAACCTTACGTAAAACTCGGAATTCGCGAGACCTCGAATTTCAAGCAAACAACCGTCGAGGACGAGGGCATTCATCACTGCGAAAAATGCAACAAAGGCTTTCACAAACGTTATCTACTGCGTCGCCACATGAAAGGCTGCCAAAATTATCGAAAAGATCCTGGCGCGCTTCTCACGCGATGTCGCGCTTGCGAGAGGATCTTCAAAGACCGCGCGAGTCTTCAAAAGCACGTTGAAAATCATCACAGCACTTACACCTGCCATTTGTGCAACGAAACCGTCACCTCCAAACTCGGAATAATGACTCACAATCGTGTCAATCACATGGAACATCCGGACTTGACCTGCGACCACAGCAGCTGCAAAAAGTTGTTCAGAACTAAAGAGGATCTCGAGTTACATCGTAAAGATCACAAGTATCACAATAGCCCGAATGTTTGCGATTTTTGCGGCGATACCGTAGAAAATAAACTCAAACTCAAAATGCACGTTCTCTCGTTGCACAGAAATGAAATTGGAGTTTCCTGCGGCGTTTGCTTGATTCCCATGAAGGATCCGAAGGATTTGAAAAAACATGTCGAGGACGAACACACCGGAGTTTTGCTTAAACCAAATACCTGCCAGGTTTGCGGTAAACAGTACGCCTCCAAGTGGAAAGCCTTCGATCACACGAAAAAGTGTCACGGCAAAGTATTTCGAACGTGCAAACAGTGCCTCGCCGTATTTACGACCGATTCCGACATTCGTTATCACTACGAGCACATTCACAACGTGCCGAAAGATCAGCTTGCGGGTTTCGAAAAACGCCTCGACATGCGGCCCGACGAATTCGAAAATATGGACGTCGTCGTTAAGGAGGAACCCGAGGATTACGATTACGACGATGGCGTCTGCGACGACGACGCTTTCGACTACAAACGACGGAGAAACGATACGTACGACTGCGATATATGTCCCGAAATATTTCTCAATCGCGACACACTCTCCGATCACTACAGAAACGTTCACAACAAGGATCCGCAAAAGATGTTCAAAAAGATAAAGCTCGACGGCTCGAAAAGCTCCAAGGCAAAGCGAAAAATGCGGGAACGCGAGAATTTCGAGTGCCGAAATTGCAGCAAACAATTTTGCACGAAAACGCTTTTCTGGAATCATATTAATGTGTGCACGAGAAGAAACTCCGGCAGTCGAGAAGAAACTCACTATCCCACGTCGATTCTTGAGGCGCATCTAAAAAATAACAATAAAATCAAGAAGGAGCCTCTTGAGCCCATGCTCAACGAATCCAACTTAAATATACCGGATTTCAATCTCTTCGAGGACATTAATATGCAACTTTCTGAGCAAAAACCGGTACCGAATCTCATGCCACTTTCGCAAATGCGACTGCTGAACAGCATGAAGTGCTCGAGAAAAGATTCCCGGAAGGTTTACGACGAATCCACAAACACCGAATGCACCTGCGAAGTCTGCGGCAAACCTTGGCCAGCTAAGAAGCATCTCTGGCAACATTTGATCAGATTTCATCGAGCTGAAGCTGCAGTCACGTGCGGAGTGTGTCTAAAATTGTGCAGAACTTACGAGGAATTGGCCGAGCATCTTAAAGCCACTCACGAGTCGATTCTCTCGTGCGAGGGCAACAATTTCACGTGCAAAACTTGCGGACGTTATCACAACGCTCGTAGCAAGTTGTTGCTACACATGAGCATCCATATTAACAGCACTGGCATCGCCTGGTGCCCAAAGTGCGAACAAAGCTTCGAGAGTGAGGAAAAACTCAATGAACACTCGGTAACGTGCGACAAACGACAGCCCGATTACGAGGAGCACAGCGTCGACATCGACCGAAATTCAAAGCACGAAGTCGACGACAAAGGCAGTTTGATCGGAGACGGAGCTTCGCTTACCGGCGAGGGCGATTTTTCCGATCATCATCACAGCAATTCCGATAACTCCGAGGACGACGACAGCAGCAACGGCGAAAGCGGCAGTGAGGATGAAGAGCACGAAGCGGAAGAGGAAACCGAGTCCAGAACGAACAGTCGAGCTACCTGGGAAGTTAGTTATCGGTCGGAGAGCGAAGAGGAACGCGATTCCGACGATGAAGACATTCCTGTGATCGCGGAAATAGAGATTGACGAAAAAGTGAAGACTGAATCTTCGGAGAGGGTAAAGATCGAGAAAAAAGCCGTGGAAGCGACTGCGAATAGCGGCGAGAATGAGCAAAACGACGGTAAGGAAATAAAATCTACGGATGCGGTTGAGAACATTAAAAAAGAAAAAGATCACGAAGAGGACACGAAAAATTGCATACCCGAAGAATCCGATGACGATGGTCCTCCGATTTTGAGTCCAGTGATGCCATTGTCAGCGGAACACGAAGCCGAGGAACGCGACGATGTTGGCCACAAACTCAGCCCGATGGTACCTTTCAAAGTTAAGGAGGAAAAAGAAACGAAGACTGATATTCAGGAGAAAACTCCCGCAGGTAATGACAAAGAATTTGCTGAGGAATTAGGTTCGGATGAAGAGGCAGAAGCCGAATTAGACGAGGATGACAACGACGAAATTGACGATGAAGATAGTAGAATTCACGTGGTTAATCCCAACGACGAATATCATTCGGACGACAGCGGAGGTCCCGACGAGTCTGGAGGAGAGGAAGAGGAAATTTTCGAGGAAGAACACTCGGATGTTGAGGCGGAAGAGGAGGAAGAGGAGGAACAAGGCGCAGAAGTGGAGGAAGAAGAGGAGGAAGATGATGAAGAAGGCGTAGAAATCCACAATCTGGACGGCACTGTGCTGATGGTTGCCAAAGACGCTGATGGCAATCAGATATTGATTCAGAAAAACGTTTCCGATATCGTAAACGACGATTCTATGGAAGCCGTTACCGGTTTTATCTATTCTGATGAAACCGATTTTGAAGAGCTCCGCGGTTTCGAAGTCGAACGCGAAGGGAGTGACGACGAAACGATGGAAGAGGACAAGAACGGGCAGGAAGACGATGCGATGGAGGAAGATATTTACGAAGAGGAAAAAGATGCTGAAGAGGACGAAAATATGGAGGAAACAATCGAAGAGGACAAAGACGGCCAGGAAGACGAAGCGATGGAAGAAACTGCATCAACAAGGGTTAAGGAAAACCAGGAGAACGAGGAAGTGGAATTGAGCGAGCACGAAGAGGAAAATGAAGAAGTTAATGAAGAAGAGGAGGAGGCGGAGGAAGGAGACGAGGAAAGTGATGTACAGGATTCTAATACGAGTGCCAAAAGCGATGTGTCAAGGACGTAG
- Protein Sequence
- MSLSWFRVLSLSNAWIVRHDPKYRRKRGNFSLKRIEEHDRLPKCLCYRCMYNLENFYDFRTACVHAVALLERCLPPDSNTAESEIQNDVKNYSELRTELLKQKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILDASGTEDGFEDTEDRKSDEYEMDMETNPSDFLEMTPMVTEELDDNEAPKPPKVEPRNSDVFQHTAEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGAKVVTDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRTNLEEHIKSRHTGLPPPPELPIPYVQPDNRYKCKTCPKMYTTVTELNKHGRVCLGDRPKEKPNKKAPRKSKSLIDTTDPSSTDTDNDSKDYRNAEAKLSKNPQLTILKQALTKGEGSKRDYEDRNASNYKLVEIPKTDGVEGDGQKRWYCETCPQNFSSIDKLKEHETTHDAERPYICILCEKDFVVKSSLSRHILSSHGVDPSPIVDSDKCLKKTVLAQSWSKQLIKTERTKSGKEGSVSSEDVESASGNMIEIETVFVCEICTRDFNDRASLWLHIRATHKECAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLISEQRRYSCTICGRQHDSRKKLMTHVSIHNVDPGYDPASFVQLNSNYYNENVNSNEANEALMDFDAEDGEKIDCYICYKSFPNEDHLIRHQRNAHKSEPVIPSGGDPSATSNGPGAPGVNGTKAQYHLFFVCELCGSSHPSKWERWLHVSSNHSEEPSIRCEREDCGKIFATKTLRNDHAQHHLIQGSSPNTCEVCGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVMKLSTHVKSNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLEVETTANNGVNENANNESLPYEKTAVPETELTCELCAELTFYTWESLCNHRRSMHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCSYCMKTSASKDHLAAHILKIHRYEPYVKLGIRETSNFKQTTVEDEGIHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHVENHHSTYTCHLCNETVTSKLGIMTHNRVNHMEHPDLTCDHSSCKKLFRTKEDLELHRKDHKYHNSPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDEHTGVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDSDIRYHYEHIHNVPKDQLAGFEKRLDMRPDEFENMDVVVKEEPEDYDYDDGVCDDDAFDYKRRRNDTYDCDICPEIFLNRDTLSDHYRNVHNKDPQKMFKKIKLDGSKSSKAKRKMRERENFECRNCSKQFCTKTLFWNHINVCTRRNSGSREETHYPTSILEAHLKNNNKIKKEPLEPMLNESNLNIPDFNLFEDINMQLSEQKPVPNLMPLSQMRLLNSMKCSRKDSRKVYDESTNTECTCEVCGKPWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCRTYEELAEHLKATHESILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINSTGIAWCPKCEQSFESEEKLNEHSVTCDKRQPDYEEHSVDIDRNSKHEVDDKGSLIGDGASLTGEGDFSDHHHSNSDNSEDDDSSNGESGSEDEEHEAEEETESRTNSRATWEVSYRSESEEERDSDDEDIPVIAEIEIDEKVKTESSERVKIEKKAVEATANSGENEQNDGKEIKSTDAVENIKKEKDHEEDTKNCIPEESDDDGPPILSPVMPLSAEHEAEERDDVGHKLSPMVPFKVKEEKETKTDIQEKTPAGNDKEFAEELGSDEEAEAELDEDDNDEIDDEDSRIHVVNPNDEYHSDDSGGPDESGGEEEEIFEEEHSDVEAEEEEEEEQGAEVEEEEEEDDEEGVEIHNLDGTVLMVAKDADGNQILIQKNVSDIVNDDSMEAVTGFIYSDETDFEELRGFEVEREGSDDETMEEDKNGQEDDAMEEDIYEEEKDAEEDENMEETIEEDKDGQEDEAMEETASTRVKENQENEEVELSEHEEENEEVNEEEEEAEEGDEESDVQDSNTSAKSDVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00653028;
- 90% Identity
- iTF_01497647;
- 80% Identity
- -