Cinc014680.1
Basic Information
- Insect
- Clistopyga incitator
- Gene Symbol
- -
- Assembly
- GCA_947507545.1
- Location
- OX382185.1:6015603-6018235[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-09 4.6e-06 26.6 0.0 3 37 17 51 15 54 0.90
Sequence Information
- Coding Sequence
- ATGGTTCGTCGATATGTTCGAAAGACGACCCGCGGTTGTTGGGACGAGCGTGCGATGGTATCAGCGATGGATGCGATTCAGTCGAAGAAAATGGGTTACTTACAATCCGCCAAGAAGCACGGAGTCCCAAGGTCAACACTCCGGCGAATAATGAAGAAATTAGCGGCGGACGGTGAGGTGAACATCCGGTCACCTTTAGGTTCAAAAGCCTCGATATTCACAGCGAGCGAGGAGAAACAGCTGGCGGCCCATTTGTTGACCATCGAAAAAAGTCTCTTCGTCATAACGAACGTAGCTCGACGTAAATTGGCCTACCAACTGGCGACGAAAATCGGCAAAGCCAACAAATGGAAGGACAACATTGCCGGCAGAGAATGGCTTCGAGATTTCATGAGGAGAAACGAAGAAGTGGCCGTAAAGCCTAGTCCTCCAGGAAAACCAGCCGCGCCTAAGGTTGTGGGTTTCAATAAACCAGCGGTCACAAAATTTTACGAAGTTTTGGGTGATCTGTACAACAAACATCAATTAACATCCGATAGAATCTATAATTGCGACGAAGTTTCCATGACCTGCGATGCTAAGTCGCAGGGAAAATCTATATCCCTTAAGGGTCACACACCAGGAGCGCCCGGATCTGCGCCGGTTGAACCTGGCAAGACAATTACCGTTGAACTCTGCATGAGTGCAACTGGCGTCTTTATGCCACTTCTCTTCGTTTTTCCTCGATCATCGTTGGATCCTCAGTTCACCAGTCACTTAATTTTACCGTGTTACACTCGATGCCACgaatccggttggatgatgagcgactccttcttctgctggctcaaccatttcgttaaattctccagagcgactccaaaaaatccagtcttgttgctaatggacggtgacacgagtcacacgatgacgataccgctcctcgaattggcgagggacaacggagtgataatgctctgcttgccgcagaattgtacacacaaattgcaacctcttgaagcagagttttttggaccgttgagcaaacactatacaaccgcagttgccaactggatagcaacgcatcctggacaatcagtgacgatttaccaaattcccatgctcttcgagcaagcctttatccaatcggcaacaatggttacggcgttgatcgcgtttagaaaaactggaatatggcccttcaatcctaataattttACGGATCAAGACTTTGCCGGCGCAGCGGCCAATCTTGTGCCTCAACAAAATAATACCCCAGCGATAGAGCCCGCGCAAAATTCCGTGATCAATAATAACAAGGAACCCGCACCGTTCACGCACTCTTGGAAAACCAATAATTGCACCGAAGAAATGAGAGCAACTACGTCCACGTCTTTTGTCGAAGCTGTCTTAGGAGAATCACAGAATCATCCATCGAGAAAGCGACCAAACCAATACGCCGTGCCAGTAATACAACAGAGTTGCTCTCAGAGTAATCCAAAAGAGCCTACAATTGCGAGTCAACCTTGGAAATCTATGGTCAATTGTGTGAATGATATGAGAGCGTCGTCAGCGCTGGAAGCTGCACTGGAACATCAAAATAATCAGCAAAGGAAACGCAGTCAACACGTCATTACGTCATCGTTACCAACGGGACAGTTGAATTATCAATTAAATAACATGGAACCTGCAATGCCTGGACCCCATTGGAAGTCTGCAAATTCTGTGAATGAGATGAGGCTGTCGACATCTTCGGCTTATGTCGAGGCAGTATTTGGAGGTCCACAAAATCATCCATCGAGAAATATGGAAGAGCCTCAAGTTCCAGGGCCTTCTTCCGAACCTTCGATATATAATATGATTCCACACATGTTTATGTGA
- Protein Sequence
- MVRRYVRKTTRGCWDERAMVSAMDAIQSKKMGYLQSAKKHGVPRSTLRRIMKKLAADGEVNIRSPLGSKASIFTASEEKQLAAHLLTIEKSLFVITNVARRKLAYQLATKIGKANKWKDNIAGREWLRDFMRRNEEVAVKPSPPGKPAAPKVVGFNKPAVTKFYEVLGDLYNKHQLTSDRIYNCDEVSMTCDAKSQGKSISLKGHTPGAPGSAPVEPGKTITVELCMSATGVFMPLLFVFPRSSLDPQFTSHLILPCYTRCHESGWMMSDSFFCWLNHFVKFSRATPKNPVLLLMDGDTSHTMTIPLLELARDNGVIMLCLPQNCTHKLQPLEAEFFGPLSKHYTTAVANWIATHPGQSVTIYQIPMLFEQAFIQSATMVTALIAFRKTGIWPFNPNNFTDQDFAGAAANLVPQQNNTPAIEPAQNSVINNNKEPAPFTHSWKTNNCTEEMRATTSTSFVEAVLGESQNHPSRKRPNQYAVPVIQQSCSQSNPKEPTIASQPWKSMVNCVNDMRASSALEAALEHQNNQQRKRSQHVITSSLPTGQLNYQLNNMEPAMPGPHWKSANSVNEMRLSTSSAYVEAVFGGPQNHPSRNMEEPQVPGPSSEPSIYNMIPHMFM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01497334;
- 90% Identity
- iTF_00652618; iTF_01497334;
- 80% Identity
- -