Cdum024098.1
Basic Information
- Insect
- Clepsis dumicolana
- Gene Symbol
- ZFY
- Assembly
- GCA_963691665.1
- Location
- OY829529.1:9246484-9249412[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1.1 77 4.8 0.4 1 23 188 211 188 211 0.94 2 17 8.7e-05 0.006 17.7 0.9 2 23 217 238 216 238 0.97 3 17 0.00014 0.0094 17.1 2.1 2 23 269 291 268 291 0.96 4 17 0.0015 0.1 13.8 0.3 1 23 382 405 382 405 0.93 5 17 0.00037 0.026 15.7 0.3 1 21 409 429 409 430 0.94 6 17 0.002 0.14 13.4 0.6 1 23 439 462 439 462 0.97 7 17 0.096 6.7 8.1 0.5 1 23 467 490 467 490 0.91 8 17 6.4e-06 0.00044 21.3 0.7 3 23 504 524 502 524 0.97 9 17 0.0035 0.24 12.6 2.1 1 23 530 552 530 552 0.98 10 17 0.29 20 6.6 0.4 2 23 561 581 560 581 0.97 11 17 0.00027 0.019 16.1 2.5 1 23 591 613 591 613 0.98 12 17 0.16 11 7.5 0.0 2 23 618 638 617 638 0.95 13 17 0.028 2 9.8 0.1 1 23 654 677 654 677 0.97 14 17 4.5e-05 0.0031 18.6 1.2 1 23 683 705 683 705 0.98 15 17 0.00085 0.059 14.6 5.3 2 23 712 733 711 733 0.96 16 17 0.00043 0.03 15.5 0.3 1 23 739 762 739 762 0.96 17 17 0.071 4.9 8.5 0.3 3 23 769 790 767 790 0.95
Sequence Information
- Coding Sequence
- ATGGAGGTTCCAGAAGTAGCAGAAGAAACTGAAATAACTATAACTATTAAAGAATATGATGATTTCGACTACATAAGAGAGAATCTAAAGCAAGTGTTATACTTGCCTCAGTTCTGCGGGATATGTCTGAAAGGGAGTGAGGATTTGTTTGATGTTGATGTTGAATTTGAGGTGGTTACTCATCGGAAGACTGATGTGAAGCTGTTGAAGGACATTGTTGGTTATGTGTTTAATaatcaaGTCCAGGAAATCCTAGCAAGCACTTACTTGTGCAACACATGCATTGATCATGTACTGGAGTCATACATTTTCATTTACCACACTAGAGAAACATCAAAAATCATCAACAACTGCATAAAGGAATTAAACTATAAAGCTGTTAATGCTATTGAACAATTAGAGGCAACGGAAAGCTATGAGAACTCGGAAGTTGTTATAATATTAGAAAATAACGATACTTACTATCCTCAGCATGTTATTAAAGAAACAACAGTTAAAAAAGACATGGTAACTGTTACAAAGAAGAAATCACAagtaaaaacatacaaaaagcaTGCAGGTTATCGCTGCGTTGAATGCAATATCATAGTACAAACTTTTAAGGAGTGGAAACAGCATGAGAGAGATTTTCATGAGAAACCACAAATCCAGTGTCAGATTTGCAACAAAGTTTTAAGTAGCGAGCAAAGTCTTAAAACGCATTACAAGACACATGCTATGATGAAATGTAAAATATGTCAATTTCTTGTCCCTGATGAAGACTTGAATGAgcattttaaattaaaccaTGAAGATGATAAACAAACTTGCCATATTTGTAATCTCTCTTTTTACACAAACAGTGAAATGAATTCACATCTAAAAATAAGCCATCCAGATGAAGATGATTCTGAACAAAATCAGACCCAATGTTTAATGTGTTTGAGACGGATCATGGGAAACCAACTGACAGAGCATAAATGCAAATTTGGTTGTTCAGAATGCTCAGAGATGCCTTGTATCCATCATAAATACTTGATATCTTACAGAGACCAAGTACAGGCCAGGGCTTCTAAGATAAAATGCATTGATTGTGACTATGTCTGCCATAAGAAGGAATTTCTAGTTGGACATGCTAATCGAGAACATTTAGATCACATTCCTTTTGCATGTGACATCTGTGGACAGCGCTTTTACTCCAAAATAGGGCTCCGGGGACATATTTATCAGTTCCACACAGAGACCTATACTTGTGATTATTGTGATCAAGAGTTCAAAGGTAGTAGTGGACTCGAAAACCACAATAAGACATGTAATGCTGAAGTCAGAAGAGAGTTTGAATGTGATGAATGTCCGGCTTCCTTTGAAAGCTTAAAATTCCTCGCCAATCACAAAAAGAGGAAACATATACAGGATATTTATCCCTGCAATTTGTGTACTAAAACATTCTTGAGCGACGGCAAACTGAAAGAACATACAGTTAAAGTTCACAGTGGCTTGCAGAATAGAAACAGAAGGTCATTCACAGACTGTGTCATCTGTGAGAAGAAATTCGATACGAGAGGCGATTTAAAACGCCATATCAAAACTCATGGACCAAACGCTACATTCCCGTGCAGAAGTTGTGACATAGAATTTGAGACACTGAAACAATTGCATGTGCACAGAAGAAAGCATGCGAAATCATATTGCGAACGTGTTCAGTGTGAAATTTGTAATGTGGAGCTTCAGTCTGCATGTTTGGCACAGCATATGTTACGACATGCAGTGGAGGCTGGTGAAGCTCCGTCTTTTAGTTGTGAAATTTGTGGGAAGATGTGCCCTTCCAAAGTTTATTTAAGATACCACAAACAGAGTCATATGGAACCAGTACCTTGCCCGGAATGCAACAAGTTGATAAAACCAGCAGGCCTGCAGAAGCACATTAAGTATCATGGTTATAAAGATGACCCCGTAATGAGGGAGAAGATGAAACGTAAATACAAATGCAACCTATGTGAATATGTAGCCACTGATCCAAGCATTTTAGAAGCCCATGTTAACCGTTATCATTTAAAAGTGAAACCGTACATATGCCCCGTTTGTGATAAAGACTTTTGCGGCAAACTGCAGCTCAGTAGGCATCAAGAAACTCATTATGTGAAGAAAGGTCTACACTGCGAGATTTGTCAAAAGAAATTTTCCAACAAAATCTGCTTGCGGATGCATTTAAGACTGCATACGGGTGAACGACcttattactgtgaagtttgtGCAGAGAGCTTTATATCGGCTAGTGCTTTGAAGACTCATAAGATTAAAAAACATTCAGAAAAATCTATAGCTTGCCCATTCTGTAACAGAATGTTTTACATAGCAGTGGAAATGAGGCAGCATTTTAAAAAATACCACTGGCCGCATAAGGACAGGAAGTTTGACCATAGAGAAGTAGAGGGTTTAGGCAGAGAGTATTATTATTTGTTCGAAGATGGCAGAAGACCTAGGTTGGATGATGAGGAGTGCACTAGCAATGTTATCATTGAAGAAGTAAATGAATAA
- Protein Sequence
- MEVPEVAEETEITITIKEYDDFDYIRENLKQVLYLPQFCGICLKGSEDLFDVDVEFEVVTHRKTDVKLLKDIVGYVFNNQVQEILASTYLCNTCIDHVLESYIFIYHTRETSKIINNCIKELNYKAVNAIEQLEATESYENSEVVIILENNDTYYPQHVIKETTVKKDMVTVTKKKSQVKTYKKHAGYRCVECNIIVQTFKEWKQHERDFHEKPQIQCQICNKVLSSEQSLKTHYKTHAMMKCKICQFLVPDEDLNEHFKLNHEDDKQTCHICNLSFYTNSEMNSHLKISHPDEDDSEQNQTQCLMCLRRIMGNQLTEHKCKFGCSECSEMPCIHHKYLISYRDQVQARASKIKCIDCDYVCHKKEFLVGHANREHLDHIPFACDICGQRFYSKIGLRGHIYQFHTETYTCDYCDQEFKGSSGLENHNKTCNAEVRREFECDECPASFESLKFLANHKKRKHIQDIYPCNLCTKTFLSDGKLKEHTVKVHSGLQNRNRRSFTDCVICEKKFDTRGDLKRHIKTHGPNATFPCRSCDIEFETLKQLHVHRRKHAKSYCERVQCEICNVELQSACLAQHMLRHAVEAGEAPSFSCEICGKMCPSKVYLRYHKQSHMEPVPCPECNKLIKPAGLQKHIKYHGYKDDPVMREKMKRKYKCNLCEYVATDPSILEAHVNRYHLKVKPYICPVCDKDFCGKLQLSRHQETHYVKKGLHCEICQKKFSNKICLRMHLRLHTGERPYYCEVCAESFISASALKTHKIKKHSEKSIACPFCNRMFYIAVEMRQHFKKYHWPHKDRKFDHREVEGLGREYYYLFEDGRRPRLDDEECTSNVIIEEVNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00462633;
- 90% Identity
- iTF_00156505;
- 80% Identity
- -