Basic Information

Insect: Clepsis dumicolana
Gene Symbol: -
Assembly: GCA_963691665.1
Location: OY829532.1:6662173-6663738[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3e-05 0.0021 19.1 1.0 2 23 78 100 77 100 0.94

2 14 0.00068 0.047 14.9 3.0 2 23 108 130 107 130 0.95

3 14 0.005 0.35 12.1 2.7 2 23 137 159 136 159 0.93

4 14 2.2e-07 1.5e-05 25.9 0.8 3 23 168 189 166 189 0.95

5 14 3.7e-05 0.0025 18.9 1.2 2 23 197 219 196 219 0.96

6 14 0.00011 0.0074 17.4 0.9 1 23 226 249 226 249 0.97

7 14 0.00023 0.016 16.4 1.0 2 23 256 278 256 278 0.94

8 14 0.00012 0.0083 17.2 3.2 2 23 294 315 293 316 0.94

9 14 0.00019 0.013 16.6 0.3 3 23 325 346 324 346 0.95

10 14 5.8e-06 0.0004 21.4 5.8 2 23 352 374 352 374 0.97

11 14 0.45 31 6.0 5.0 2 23 382 404 381 404 0.93

12 14 2.1e-05 0.0015 19.6 3.7 1 23 410 432 410 432 0.99

13 14 2.7 1.8e+02 3.6 2.3 1 23 438 461 438 461 0.89

14 14 0.013 0.89 10.9 0.1 2 21 480 499 479 500 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3e-05	0.0021	19.1	1.0	2	23	78	100	77	100	0.94
2	14	0.00068	0.047	14.9	3.0	2	23	108	130	107	130	0.95
3	14	0.005	0.35	12.1	2.7	2	23	137	159	136	159	0.93
4	14	2.2e-07	1.5e-05	25.9	0.8	3	23	168	189	166	189	0.95
5	14	3.7e-05	0.0025	18.9	1.2	2	23	197	219	196	219	0.96
6	14	0.00011	0.0074	17.4	0.9	1	23	226	249	226	249	0.97
7	14	0.00023	0.016	16.4	1.0	2	23	256	278	256	278	0.94
8	14	0.00012	0.0083	17.2	3.2	2	23	294	315	293	316	0.94
9	14	0.00019	0.013	16.6	0.3	3	23	325	346	324	346	0.95
10	14	5.8e-06	0.0004	21.4	5.8	2	23	352	374	352	374	0.97
11	14	0.45	31	6.0	5.0	2	23	382	404	381	404	0.93
12	14	2.1e-05	0.0015	19.6	3.7	1	23	410	432	410	432	0.99
13	14	2.7	1.8e+02	3.6	2.3	1	23	438	461	438	461	0.89
14	14	0.013	0.89	10.9	0.1	2	21	480	499	479	500	0.93

Sequence Information

Coding Sequence: ATGGAACAAGAAATAGAAGAAATTTACATAAAGACCGACATAGCACAATTAGAGGTTGAAGTCAACTTAAACCCGTACCAAGCACCAGAGGAAGTATTCGGAATCAAAACGGAAGACCCAGCAAAGAAAGTGTCTGCCAGTGAAGAAAGGGATGAAGATCTTGAACCTACAAATACTGAAACTGAACCAATAATTGGTAAAGTATACGAAAATGGGAAGGTGAATAGGCTCCAATGTCCACAGTGCGAGAACACCTTCAAAAATCGAGCAAATTTAAAGCAGCATCTAAAATTTGTCCACTCTTCTGAGGATGATATCGTTGAATGTGAGAAATGCTTCCGAACTTTCAAGTCCGTAGGGCATTTGCGGTCGCACATACATTCAGTACATGCTGAGGAGAAAGAAGTGAAGTGTGACCACTGTGACAAAGTTTTTTTGAACAAGAAGAGGTTGAATAACCATATTTTTTACTCCCACCCAGAACCGGAAGAGAGTGTGAACTGTAGCATATGCTCTAAAGTTTTTAAGCGCAGATACAATCTTAAAATACATATGAGATTGGTCCATCCTTCCGAGGATAGATCAGTCCAGTGCCCGCACTGTGACAAAAAGTTCAAAGTTGACATGCTACTGCAACGTCATATAAAATGGAGTCATCCTCAAGACGGCATGATGTACCGGTGTCCCGAATGCGGAAGGACATTACCTTCAATAGCTTGCTTCAAAAAACATATGCAGAATGTCCACTCGGGTCTTCAAGATGCCGTTTGCAACGTCTGCTACAAAGTTTTTAAAACCATTAAGACGTTGAGGAGACATGAGAAAAATATACATGGCGGGGAGAAGGTGGAAAGCAAACCGACTAAAGTAGGAGAATTACAGTGTTCGCAATGTGATAAGAAATTCACAACTAACACTGCTTTATTCTGGCATTTTGAGAGACATCATTCGGAAAACAGAAGAAGTAACGCATGTCAAATTTGTGGGAAGGAGCTGTCGGACCATGCCAGTCTGAAACGGCATCTGGATATGGTGCATTCGGTCGAATCCGCCCGCTGTCACATATGCTCGAAAAGCTTCAAAAGCCACATGAACCTGCAGAGGCATATACGAGTCACCCACGCGCCGCCCGAGGCCGCACAAACTTGTGACGCTTGTCACAAGACCTTCAAATGCTCCATGCATCTACGGATACACGTTAACGCAGTGCATTCGAAAGATGGCACTTTCACATGTGACATATGCAACAAGGAATTCTCTTCGAAGAAATACATGTTGAAACACAAGAAGACACATGTGGATGTCAAGGAGTTTCCTTGTGGGGTGTGTAATAAGCTTTTTAAGTGTGTCAATGATGTTAAGAAACATAACAAGCGGGTGCacatgaagaaattgaagatgGAGAATGAGAAATGTGAAGATGAGTCAACGGAGCTGAGTTGCTTGAAATGTGGATCTGGTTTTGATAATGAAGAGAATCTTCATGCTCACATATTGAAGTGTGGTGATACACACGCTTTGAATTTTGTTAAGGTAGAGATTGAGGAATGTGATGAAAATGAATAG
Protein Sequence: MEQEIEEIYIKTDIAQLEVEVNLNPYQAPEEVFGIKTEDPAKKVSASEERDEDLEPTNTETEPIIGKVYENGKVNRLQCPQCENTFKNRANLKQHLKFVHSSEDDIVECEKCFRTFKSVGHLRSHIHSVHAEEKEVKCDHCDKVFLNKKRLNNHIFYSHPEPEESVNCSICSKVFKRRYNLKIHMRLVHPSEDRSVQCPHCDKKFKVDMLLQRHIKWSHPQDGMMYRCPECGRTLPSIACFKKHMQNVHSGLQDAVCNVCYKVFKTIKTLRRHEKNIHGGEKVESKPTKVGELQCSQCDKKFTTNTALFWHFERHHSENRRSNACQICGKELSDHASLKRHLDMVHSVESARCHICSKSFKSHMNLQRHIRVTHAPPEAAQTCDACHKTFKCSMHLRIHVNAVHSKDGTFTCDICNKEFSSKKYMLKHKKTHVDVKEFPCGVCNKLFKCVNDVKKHNKRVHMKKLKMENEKCEDESTELSCLKCGSGFDNEENLHAHILKCGDTHALNFVKVEIEECDENE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00342813;
90% Identity: iTF_00342813;
80% Identity: iTF_00342813;